RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-219ENST00000581250 DCAF8L1A6NGE4 600 aa15.72■□□□□ 0.11
PPP4R1-219ENST00000581250 GYS1P13807 737 aa15.72■□□□□ 0.11
PPP4R1-219ENST00000581250 CANXP27824 592 aaKnown RBP15.72■□□□□ 0.11
PPP4R1-219ENST00000581250 PELP1Q8IZL8 1130 aaKnown RBP15.72■□□□□ 0.11
PPP4R1-219ENST00000581250 MIS18AQ9NYP9 233 aa15.72■□□□□ 0.11
PPP4R1-219ENST00000581250 RRP7AQ9Y3A4 280 aaKnown RBP15.72■□□□□ 0.11
PPP4R1-219ENST00000581250 UTRNP46939 3433 aa15.72■□□□□ 0.11
PPP4R1-219ENST00000581250 USP42Q9H9J4 1324 aaKnown RBP15.71■□□□□ 0.11
PPP4R1-219ENST00000581250 ZNF330Q9Y3S2 320 aaPredicted RBP15.71■□□□□ 0.11
PPP4R1-219ENST00000581250 LAMB4A4D0S4 1761 aa15.7■□□□□ 0.1
PPP4R1-219ENST00000581250 PRAMEF22A3QJZ6 481 aa15.7■□□□□ 0.1
PPP4R1-219ENST00000581250 STARD3NLO95772 234 aa15.7■□□□□ 0.1
PPP4R1-219ENST00000581250 RIPK4P57078 832 aa15.69■□□□□ 0.1
PPP4R1-219ENST00000581250 TAF7Q15545 349 aaPredicted RBP15.69■□□□□ 0.1
PPP4R1-219ENST00000581250 NEUROD2Q15784 382 aa15.69■□□□□ 0.1
PPP4R1-219ENST00000581250 NLGN1Q8N2Q7 840 aa15.69■□□□□ 0.1
PPP4R1-219ENST00000581250 ADAMTS8Q9UP79 889 aa15.69■□□□□ 0.1
PPP4R1-219ENST00000581250 SCN7AQ01118 1682 aa15.69■□□□□ 0.1
PPP4R1-219ENST00000581250 ZPR1O75312 459 aa15.68■□□□□ 0.1
PPP4R1-219ENST00000581250 TMPOP42166 694 aaKnown RBP15.68■□□□□ 0.1
PPP4R1-219ENST00000581250 PIP4K2AP48426 406 aaPredicted RBP15.68■□□□□ 0.1
PPP4R1-219ENST00000581250 FKBP8Q14318 412 aa15.68■□□□□ 0.1
PPP4R1-219ENST00000581250 GPR162Q16538 588 aa15.68■□□□□ 0.1
PPP4R1-219ENST00000581250 USPL1Q5W0Q7 1092 aa15.68■□□□□ 0.1
PPP4R1-219ENST00000581250 WWC3Q9ULE0 1092 aa15.68■□□□□ 0.1
PPP4R1-219ENST00000581250 KIF13BQ9NQT8 1826 aa15.67■□□□□ 0.1
PPP4R1-219ENST00000581250 A1BGP04217 495 aa15.67■□□□□ 0.1
PPP4R1-219ENST00000581250 RUNDC1Q96C34 613 aa15.67■□□□□ 0.1
PPP4R1-219ENST00000581250 TEX13AQ9BXU3 409 aaPredicted RBP15.67■□□□□ 0.1
PPP4R1-219ENST00000581250 CD2APQ9Y5K6 639 aa15.67■□□□□ 0.1
PPP4R1-219ENST00000581250 N4BP2Q86UW6 1770 aaPredicted RBP15.67■□□□□ 0.1
PPP4R1-219ENST00000581250 KIAA1551Q9HCM1 1747 aa15.66■□□□□ 0.1
PPP4R1-219ENST00000581250 CCDC184Q52MB2 194 aa15.66■□□□□ 0.1
PPP4R1-219ENST00000581250 USP16Q9Y5T5 823 aa15.66■□□□□ 0.1
PPP4R1-219ENST00000581250 PARP3Q9Y6F1 533 aa15.66■□□□□ 0.1
PPP4R1-219ENST00000581250 C10orf71Q711Q0 1435 aa15.66■□□□□ 0.1
PPP4R1-219ENST00000581250 BCORQ6W2J9 1755 aa15.65■□□□□ 0.1
PPP4R1-219ENST00000581250 SNRPA1P09661 255 aaKnown RBP15.65■□□□□ 0.1
PPP4R1-219ENST00000581250 DDR1Q08345 913 aa15.65■□□□□ 0.1
PPP4R1-219ENST00000581250 NARFQ9UHQ1 456 aa15.65■□□□□ 0.1
PPP4R1-219ENST00000581250 AFDNP55196 1824 aaKnown RBP15.64■□□□□ 0.09
PPP4R1-219ENST00000581250 YBX3P16989 372 aaKnown RBP eCLIP15.64■□□□□ 0.09
PPP4R1-219ENST00000581250 EIF5P55010 431 aaKnown RBP15.64■□□□□ 0.09
PPP4R1-219ENST00000581250 LMOD3Q0VAK6 560 aa15.64■□□□□ 0.09
PPP4R1-219ENST00000581250 CHD4Q14839 1912 aa15.64■□□□□ 0.09
PPP4R1-219ENST00000581250 ANP32CO43423 234 aa15.63■□□□□ 0.09
PPP4R1-219ENST00000581250 PNISRQ8TF01 805 aaKnown RBP15.63■□□□□ 0.09
PPP4R1-219ENST00000581250 BCL2L12Q9HB09 334 aa15.63■□□□□ 0.09
PPP4R1-219ENST00000581250 TSPYL4Q9UJ04 414 aa15.63■□□□□ 0.09
PPP4R1-219ENST00000581250 TBC1D2BQ9UPU7 963 aa15.63■□□□□ 0.09
PPP4R1-219ENST00000581250 PXDNLA1KZ92 1463 aa15.63■□□□□ 0.09
PPP4R1-219ENST00000581250 A0A087WZG4 1122 aa15.62■□□□□ 0.09
PPP4R1-219ENST00000581250 YY1P25490 414 aa15.62■□□□□ 0.09
PPP4R1-219ENST00000581250 IL6STP40189 918 aaPredicted RBP15.62■□□□□ 0.09
PPP4R1-219ENST00000581250 EIF4A1P60842 406 aaKnown RBP15.62■□□□□ 0.09
PPP4R1-219ENST00000581250 BICDL1Q6ZP65 573 aa15.62■□□□□ 0.09
PPP4R1-219ENST00000581250 NPM2Q86SE8 214 aaKnown RBP15.62■□□□□ 0.09
PPP4R1-219ENST00000581250 SENP3-EIF4A1A0A087X0R7 540 aa15.61■□□□□ 0.09
PPP4R1-219ENST00000581250 POLRMTO00411 1230 aaKnown RBP15.61■□□□□ 0.09
PPP4R1-219ENST00000581250 NFIXQ14938 502 aa15.61■□□□□ 0.09
PPP4R1-219ENST00000581250 TRIM35Q9UPQ4 493 aa15.61■□□□□ 0.09
PPP4R1-219ENST00000581250 NBPF26B4DH59 902 aa15.6■□□□□ 0.09
PPP4R1-219ENST00000581250 APAF1O14727 1248 aa15.6■□□□□ 0.09
PPP4R1-219ENST00000581250 NBPF10Q6P3W6 841 aaKnown RBP15.6■□□□□ 0.09
PPP4R1-219ENST00000581250 NBPF15Q8N660 670 aa15.6■□□□□ 0.09
PPP4R1-219ENST00000581250 MRS2Q9HD23 443 aa15.6■□□□□ 0.09
PPP4R1-219ENST00000581250 LAS1LQ9Y4W2 734 aaKnown RBP15.6■□□□□ 0.09
PPP4R1-219ENST00000581250 NRXN2Q9P2S2 1712 aa15.6■□□□□ 0.09
PPP4R1-219ENST00000581250 GIGYF1O75420 1035 aaPredicted RBP15.59■□□□□ 0.09
PPP4R1-219ENST00000581250 TM4SF1P30408 202 aa15.59■□□□□ 0.09
PPP4R1-219ENST00000581250 DZIP3Q86Y13 1208 aaKnown RBP15.59■□□□□ 0.09
PPP4R1-219ENST00000581250 BRCA1P38398 1863 aaKnown RBP15.59■□□□□ 0.09
PPP4R1-219ENST00000581250 A0A0G2JLW4 131 aa15.58■□□□□ 0.08
PPP4R1-219ENST00000581250 CAMTA2O94983 1202 aa15.58■□□□□ 0.08
PPP4R1-219ENST00000581250 TBC1D9BQ66K14 1250 aa15.58■□□□□ 0.08
PPP4R1-219ENST00000581250 DPEP1P16444 411 aa15.57■□□□□ 0.08
PPP4R1-219ENST00000581250 NGEFQ8N5V2 710 aa15.57■□□□□ 0.08
PPP4R1-219ENST00000581250 CARMIL3Q8ND23 1372 aa15.57■□□□□ 0.08
PPP4R1-219ENST00000581250 SERPINB2P05120 415 aa15.56■□□□□ 0.08
PPP4R1-219ENST00000581250 MYL6BP14649 208 aa15.56■□□□□ 0.08
PPP4R1-219ENST00000581250 KRT24Q2M2I5 525 aa15.56■□□□□ 0.08
PPP4R1-219ENST00000581250 ANKRD31Q8N7Z5 1873 aa15.55■□□□□ 0.08
PPP4R1-219ENST00000581250 EIF2S2P20042 333 aaKnown RBP15.55■□□□□ 0.08
PPP4R1-219ENST00000581250 TGFB2P61812 414 aa15.55■□□□□ 0.08
PPP4R1-219ENST00000581250 NECTIN2Q92692 538 aa15.55■□□□□ 0.08
PPP4R1-219ENST00000581250 BCS1LQ9Y276 419 aa15.55■□□□□ 0.08
PPP4R1-219ENST00000581250 GRIN3BO60391 1043 aa15.54■□□□□ 0.08
PPP4R1-219ENST00000581250 CHRNA5P30532 468 aa15.54■□□□□ 0.08
PPP4R1-219ENST00000581250 CCDC24Q8N4L8 307 aa15.54■□□□□ 0.08
PPP4R1-219ENST00000581250 BABAM1Q9NWV8 329 aa15.54■□□□□ 0.08
PPP4R1-219ENST00000581250 CHL1O00533 1208 aa15.53■□□□□ 0.08
PPP4R1-219ENST00000581250 DLEC1Q9Y238 1755 aa15.53■□□□□ 0.08
PPP4R1-219ENST00000581250 COL11A2P13942 1736 aaPredicted RBP15.53■□□□□ 0.08
PPP4R1-219ENST00000581250 NUP98P52948 1817 aa15.52■□□□□ 0.08
PPP4R1-219ENST00000581250 ARFGEF1Q9Y6D6 1849 aa15.52■□□□□ 0.08
PPP4R1-219ENST00000581250 NPHP1O15259 732 aa15.52■□□□□ 0.08
PPP4R1-219ENST00000581250 ANXA1P04083 346 aa15.52■□□□□ 0.08
PPP4R1-219ENST00000581250 TTLL7Q6ZT98 887 aa15.52■□□□□ 0.08
PPP4R1-219ENST00000581250 SETDB2Q96T68 719 aa15.52■□□□□ 0.08
PPP4R1-219ENST00000581250 ZNF652Q9Y2D9 606 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms