RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 SRP68Q9UHB9 627 aaKnown RBP18.6■□□□□ 0.57
SUPT4H1-205ENST00000581166 COL15A1P39059 1388 aa18.59■□□□□ 0.57
SUPT4H1-205ENST00000581166 YY1P25490 414 aa18.59■□□□□ 0.57
SUPT4H1-205ENST00000581166 TAF7Q15545 349 aaPredicted RBP18.59■□□□□ 0.57
SUPT4H1-205ENST00000581166 UTRNP46939 3433 aa18.59■□□□□ 0.57
SUPT4H1-205ENST00000581166 ZPR1O75312 459 aa18.58■□□□□ 0.57
SUPT4H1-205ENST00000581166 GOLGB1Q14789 3259 aaKnown RBP18.58■□□□□ 0.56
SUPT4H1-205ENST00000581166 CANXP27824 592 aaKnown RBP18.57■□□□□ 0.56
SUPT4H1-205ENST00000581166 FKBP8Q14318 412 aa18.57■□□□□ 0.56
SUPT4H1-205ENST00000581166 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
SUPT4H1-205ENST00000581166 PARP3Q9Y6F1 533 aa18.57■□□□□ 0.56
SUPT4H1-205ENST00000581166 EIF5P55010 431 aaKnown RBP18.57■□□□□ 0.56
SUPT4H1-205ENST00000581166 USPL1Q5W0Q7 1092 aa18.57■□□□□ 0.56
SUPT4H1-205ENST00000581166 NARFQ9UHQ1 456 aa18.57■□□□□ 0.56
SUPT4H1-205ENST00000581166 KIF13BQ9NQT8 1826 aa18.56■□□□□ 0.56
SUPT4H1-205ENST00000581166 SNRPA1P09661 255 aaKnown RBP18.55■□□□□ 0.56
SUPT4H1-205ENST00000581166 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
SUPT4H1-205ENST00000581166 PNISRQ8TF01 805 aaKnown RBP18.55■□□□□ 0.56
SUPT4H1-205ENST00000581166 CHD4Q14839 1912 aa18.54■□□□□ 0.56
SUPT4H1-205ENST00000581166 C10orf71Q711Q0 1435 aa18.54■□□□□ 0.56
SUPT4H1-205ENST00000581166 A0A087WZG4 1122 aa18.54■□□□□ 0.56
SUPT4H1-205ENST00000581166 ZNF316A6NFI3 1004 aaPredicted RBP18.54■□□□□ 0.56
SUPT4H1-205ENST00000581166 GRIN3BO60391 1043 aa18.54■□□□□ 0.56
SUPT4H1-205ENST00000581166 YBX3P16989 372 aaKnown RBP eCLIP18.54■□□□□ 0.563e-10■■■■■ 36.9
SUPT4H1-205ENST00000581166 TM4SF1P30408 202 aa18.54■□□□□ 0.56
SUPT4H1-205ENST00000581166 IL6STP40189 918 aaPredicted RBP18.54■□□□□ 0.56
SUPT4H1-205ENST00000581166 A1BGP04217 495 aa18.53■□□□□ 0.56
SUPT4H1-205ENST00000581166 RIPK4P57078 832 aa18.53■□□□□ 0.56
SUPT4H1-205ENST00000581166 THUMPD2Q9BTF0 503 aaKnown RBP18.53■□□□□ 0.56
SUPT4H1-205ENST00000581166 MIS18AQ9NYP9 233 aa18.53■□□□□ 0.56
SUPT4H1-205ENST00000581166 USP16Q9Y5T5 823 aa18.53■□□□□ 0.56
SUPT4H1-205ENST00000581166 KDM3BQ7LBC6 1761 aa18.52■□□□□ 0.56
SUPT4H1-205ENST00000581166 PRAMEF22A3QJZ6 481 aa18.52■□□□□ 0.56
SUPT4H1-205ENST00000581166 TMPOP42166 694 aaKnown RBP18.52■□□□□ 0.56
SUPT4H1-205ENST00000581166 TGFB2P61812 414 aa18.52■□□□□ 0.56
SUPT4H1-205ENST00000581166 DDR1Q08345 913 aa18.52■□□□□ 0.56
SUPT4H1-205ENST00000581166 ADAMTS8Q9UP79 889 aa18.52■□□□□ 0.56
SUPT4H1-205ENST00000581166 POLRMTO00411 1230 aaKnown RBP18.51■□□□□ 0.55
SUPT4H1-205ENST00000581166 RUNDC1Q96C34 613 aa18.51■□□□□ 0.55
SUPT4H1-205ENST00000581166 BCL2L12Q9HB09 334 aa18.51■□□□□ 0.55
SUPT4H1-205ENST00000581166 PXDNLA1KZ92 1463 aa18.51■□□□□ 0.55
SUPT4H1-205ENST00000581166 LMOD3Q0VAK6 560 aa18.5■□□□□ 0.55
SUPT4H1-205ENST00000581166 NPM2Q86SE8 214 aaKnown RBP18.5■□□□□ 0.55
SUPT4H1-205ENST00000581166 CCDC146Q8IYE0 955 aa18.5■□□□□ 0.55
SUPT4H1-205ENST00000581166 KIAA1551Q9HCM1 1747 aa18.5■□□□□ 0.55
SUPT4H1-205ENST00000581166 NFIXQ14938 502 aa18.49■□□□□ 0.55
SUPT4H1-205ENST00000581166 ZNF330Q9Y3S2 320 aaPredicted RBP18.49■□□□□ 0.55
SUPT4H1-205ENST00000581166 TBC1D2BQ9UPU7 963 aa18.49■□□□□ 0.55
SUPT4H1-205ENST00000581166 N4BP2Q86UW6 1770 aaPredicted RBP18.48■□□□□ 0.55
SUPT4H1-205ENST00000581166 SCN7AQ01118 1682 aa18.48■□□□□ 0.55
SUPT4H1-205ENST00000581166 EIF4A1P60842 406 aaKnown RBP18.48■□□□□ 0.55
SUPT4H1-205ENST00000581166 A0A0G2JLW4 131 aa18.47■□□□□ 0.55
SUPT4H1-205ENST00000581166 GIGYF1O75420 1035 aaPredicted RBP18.47■□□□□ 0.55
SUPT4H1-205ENST00000581166 RRP7AQ9Y3A4 280 aaKnown RBP18.47■□□□□ 0.55
SUPT4H1-205ENST00000581166 LAMB4A4D0S4 1761 aa18.46■□□□□ 0.55
SUPT4H1-205ENST00000581166 DPEP1P16444 411 aa18.46■□□□□ 0.55
SUPT4H1-205ENST00000581166 PIP4K2AP48426 406 aaPredicted RBP18.46■□□□□ 0.55
SUPT4H1-205ENST00000581166 NEUROD2Q15784 382 aa18.46■□□□□ 0.55
SUPT4H1-205ENST00000581166 BABAM1Q9NWV8 329 aa18.46■□□□□ 0.55
SUPT4H1-205ENST00000581166 WWC3Q9ULE0 1092 aa18.46■□□□□ 0.55
SUPT4H1-205ENST00000581166 NRXN2Q9P2S2 1712 aa18.46■□□□□ 0.55
SUPT4H1-205ENST00000581166 AFDNP55196 1824 aaKnown RBP18.45■□□□□ 0.54
SUPT4H1-205ENST00000581166 CAMTA2O94983 1202 aa18.45■□□□□ 0.54
SUPT4H1-205ENST00000581166 SERPINB2P05120 415 aa18.45■□□□□ 0.54
SUPT4H1-205ENST00000581166 DZIP3Q86Y13 1208 aaKnown RBP18.45■□□□□ 0.54
SUPT4H1-205ENST00000581166 TSPYL4Q9UJ04 414 aa18.45■□□□□ 0.54
SUPT4H1-205ENST00000581166 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
SUPT4H1-205ENST00000581166 TBC1D9BQ66K14 1250 aa18.44■□□□□ 0.54
SUPT4H1-205ENST00000581166 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
SUPT4H1-205ENST00000581166 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
SUPT4H1-205ENST00000581166 BCORQ6W2J9 1755 aa18.43■□□□□ 0.54
SUPT4H1-205ENST00000581166 KCNA3P22001 575 aa18.43■□□□□ 0.54
SUPT4H1-205ENST00000581166 BICDL1Q6ZP65 573 aa18.43■□□□□ 0.54
SUPT4H1-205ENST00000581166 TRIM35Q9UPQ4 493 aa18.43■□□□□ 0.54
SUPT4H1-205ENST00000581166 BRCA1P38398 1863 aaKnown RBP18.43■□□□□ 0.54
SUPT4H1-205ENST00000581166 BCS1LQ9Y276 419 aa18.42■□□□□ 0.54
SUPT4H1-205ENST00000581166 CLEC4GQ6UXB4 293 aa18.41■□□□□ 0.54
SUPT4H1-205ENST00000581166 ZNF784Q8NCA9 323 aaPredicted RBP18.41■□□□□ 0.54
SUPT4H1-205ENST00000581166 ANP32CO43423 234 aa18.4■□□□□ 0.54
SUPT4H1-205ENST00000581166 PIM2Q9P1W9 311 aa18.4■□□□□ 0.54
SUPT4H1-205ENST00000581166 CARMIL3Q8ND23 1372 aa18.4■□□□□ 0.54
SUPT4H1-205ENST00000581166 RGL2O15211 777 aa18.4■□□□□ 0.54
SUPT4H1-205ENST00000581166 CCDC184Q52MB2 194 aa18.4■□□□□ 0.54
SUPT4H1-205ENST00000581166 SETDB2Q96T68 719 aa18.4■□□□□ 0.54
SUPT4H1-205ENST00000581166 ZNF652Q9Y2D9 606 aa18.4■□□□□ 0.54
SUPT4H1-205ENST00000581166 CHL1O00533 1208 aa18.39■□□□□ 0.53
SUPT4H1-205ENST00000581166 CHRNA5P30532 468 aa18.39■□□□□ 0.53
SUPT4H1-205ENST00000581166 ERBB4Q15303 1308 aa18.38■□□□□ 0.53
SUPT4H1-205ENST00000581166 APAF1O14727 1248 aa18.38■□□□□ 0.53
SUPT4H1-205ENST00000581166 DALRD3Q5D0E6 543 aaKnown RBP18.37■□□□□ 0.53
SUPT4H1-205ENST00000581166 ARFGEF1Q9Y6D6 1849 aa18.37■□□□□ 0.53
SUPT4H1-205ENST00000581166 PRR5LQ6MZQ0 368 aa18.36■□□□□ 0.53
SUPT4H1-205ENST00000581166 LAS1LQ9Y4W2 734 aaKnown RBP18.36■□□□□ 0.53
SUPT4H1-205ENST00000581166 MYL6BP14649 208 aa18.35■□□□□ 0.53
SUPT4H1-205ENST00000581166 NGEFQ8N5V2 710 aa18.35■□□□□ 0.53
SUPT4H1-205ENST00000581166 CNBD1Q8NA66 436 aa18.35■□□□□ 0.53
SUPT4H1-205ENST00000581166 CFAP44Q96MT7 982 aa18.35■□□□□ 0.53
SUPT4H1-205ENST00000581166 BRIP1Q9BX63 1249 aa18.35■□□□□ 0.53
SUPT4H1-205ENST00000581166 DLEC1Q9Y238 1755 aa18.35■□□□□ 0.53
SUPT4H1-205ENST00000581166 ERVV-1B6SEH8 477 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms