RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 SF3B2Q13435 895 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-220ENST00000581160 PDIA6Q15084 440 aa11.74□□□□□ -0.53
CDK5RAP3-220ENST00000581160 TXNRD1Q16881 649 aa11.74□□□□□ -0.53
CDK5RAP3-220ENST00000581160 PROM2Q8N271 834 aa11.74□□□□□ -0.53
CDK5RAP3-220ENST00000581160 SMC4Q9NTJ3 1288 aa11.74□□□□□ -0.53
CDK5RAP3-220ENST00000581160 LY75O60449 1722 aa11.73□□□□□ -0.53
CDK5RAP3-220ENST00000581160 RC3H1Q5TC82 1133 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-220ENST00000581160 HYPKQ9NX55 129 aa11.73□□□□□ -0.53
CDK5RAP3-220ENST00000581160 CHPF2Q9P2E5 772 aa11.73□□□□□ -0.53
CDK5RAP3-220ENST00000581160 NBPF26B4DH59 902 aa11.72□□□□□ -0.53
CDK5RAP3-220ENST00000581160 KCNQ4P56696 695 aa11.72□□□□□ -0.53
CDK5RAP3-220ENST00000581160 NBPF14Q5TI25 921 aa11.72□□□□□ -0.53
CDK5RAP3-220ENST00000581160 NBPF10Q6P3W6 841 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-220ENST00000581160 INTS5Q6P9B9 1019 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-220ENST00000581160 NBPF15Q8N660 670 aa11.72□□□□□ -0.53
CDK5RAP3-220ENST00000581160 LINC00116Q8NCU8 138 aa11.72□□□□□ -0.53
CDK5RAP3-220ENST00000581160 ARHGAP45Q92619 1136 aa11.72□□□□□ -0.53
CDK5RAP3-220ENST00000581160 CAMKK2Q96RR4 588 aa11.72□□□□□ -0.53
CDK5RAP3-220ENST00000581160 BCL2L13Q9BXK5 485 aa11.72□□□□□ -0.53
CDK5RAP3-220ENST00000581160 LRRC4BQ9NT99 713 aa11.72□□□□□ -0.53
CDK5RAP3-220ENST00000581160 NOB1Q9ULX3 412 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-220ENST00000581160 SUPT16HQ9Y5B9 1047 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-220ENST00000581160 C5P01031 1676 aa11.71□□□□□ -0.53
CDK5RAP3-220ENST00000581160 CICQ96RK0 1608 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-220ENST00000581160 RNF123Q5XPI4 1314 aa11.71□□□□□ -0.53
CDK5RAP3-220ENST00000581160 CACNA1FO60840 1977 aa11.71□□□□□ -0.53
CDK5RAP3-220ENST00000581160 IPO8O15397 1037 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-220ENST00000581160 CRKLP46109 303 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-220ENST00000581160 BAG6P46379 1132 aa11.71□□□□□ -0.53
CDK5RAP3-220ENST00000581160 G2E3Q7L622 706 aa11.71□□□□□ -0.53
CDK5RAP3-220ENST00000581160 LRP10Q7Z4F1 713 aa11.71□□□□□ -0.53
CDK5RAP3-220ENST00000581160 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-220ENST00000581160 CCDC87Q9NVE4 849 aa11.71□□□□□ -0.53
CDK5RAP3-220ENST00000581160 TJP1Q07157 1748 aa11.71□□□□□ -0.54
CDK5RAP3-220ENST00000581160 CNTNAP4Q9C0A0 1308 aa11.7□□□□□ -0.54
CDK5RAP3-220ENST00000581160 TNS1Q9HBL0 1735 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-220ENST00000581160 ANXA1P04083 346 aa11.7□□□□□ -0.54
CDK5RAP3-220ENST00000581160 MYL6BP14649 208 aa11.7□□□□□ -0.54
CDK5RAP3-220ENST00000581160 CANXP27824 592 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-220ENST00000581160 IL6STP40189 918 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-220ENST00000581160 EN1Q05925 392 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-220ENST00000581160 PROSER3Q2NL68 480 aa11.7□□□□□ -0.54
CDK5RAP3-220ENST00000581160 PHAXQ9H814 394 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-220ENST00000581160 LAMB4A4D0S4 1761 aa11.69□□□□□ -0.54
CDK5RAP3-220ENST00000581160 PTPRCP08575 1304 aa11.69□□□□□ -0.54
CDK5RAP3-220ENST00000581160 KIF16BQ96L93 1317 aa11.69□□□□□ -0.54
CDK5RAP3-220ENST00000581160 RPS6KA4O75676 772 aa11.69□□□□□ -0.54
CDK5RAP3-220ENST00000581160 PIP4K2AP48426 406 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-220ENST00000581160 EIF5P55010 431 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-220ENST00000581160 FLIIQ13045 1269 aa11.69□□□□□ -0.54
CDK5RAP3-220ENST00000581160 EZH2Q15910 746 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-220ENST00000581160 ZKSCAN2Q63HK3 967 aa11.69□□□□□ -0.54
CDK5RAP3-220ENST00000581160 COPS6Q7L5N1 327 aa11.69□□□□□ -0.54
CDK5RAP3-220ENST00000581160 FRAT1Q92837 279 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-220ENST00000581160 UPF1Q92900 1129 aaKnown RBP eCLIP11.69□□□□□ -0.54
CDK5RAP3-220ENST00000581160 ZBTB1Q9Y2K1 713 aa11.69□□□□□ -0.54
CDK5RAP3-220ENST00000581160 RRP1P56182 461 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-220ENST00000581160 ATF7IPQ6VMQ6 1270 aa11.68□□□□□ -0.54
CDK5RAP3-220ENST00000581160 ILDR2Q71H61 639 aa11.68□□□□□ -0.54
CDK5RAP3-220ENST00000581160 DEFB132Q7Z7B7 95 aa11.68□□□□□ -0.54
CDK5RAP3-220ENST00000581160 API5Q9BZZ5 524 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-220ENST00000581160 RGPD3A6NKT7 1758 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-220ENST00000581160 RGPD4Q7Z3J3 1758 aa11.67□□□□□ -0.54
CDK5RAP3-220ENST00000581160 COL5A3P25940 1745 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-220ENST00000581160 A0A087WZG4 1122 aa11.67□□□□□ -0.54
CDK5RAP3-220ENST00000581160 PLIN1O60240 522 aa11.67□□□□□ -0.54
CDK5RAP3-220ENST00000581160 DDX58O95786 925 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-220ENST00000581160 MS4A1P11836 297 aa11.67□□□□□ -0.54
CDK5RAP3-220ENST00000581160 AIMP1Q12904 312 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-220ENST00000581160 XAGE3Q8WTP9 111 aa11.67□□□□□ -0.54
CDK5RAP3-220ENST00000581160 TAF1LQ8IZX4 1826 aa11.67□□□□□ -0.54
CDK5RAP3-220ENST00000581160 MYH14Q7Z406 1995 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-220ENST00000581160 FKBP5Q13451 457 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-220ENST00000581160 PDE3AQ14432 1141 aa11.66□□□□□ -0.54
CDK5RAP3-220ENST00000581160 KSR2Q6VAB6 950 aa11.66□□□□□ -0.54
CDK5RAP3-220ENST00000581160 ANKRD13DQ6ZTN6 518 aa11.66□□□□□ -0.54
CDK5RAP3-220ENST00000581160 NPM2Q86SE8 214 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-220ENST00000581160 AKT1S1Q96B36 256 aa11.66□□□□□ -0.54
CDK5RAP3-220ENST00000581160 AK7Q96M32 723 aa11.66□□□□□ -0.54
CDK5RAP3-220ENST00000581160 RTCBQ9Y3I0 505 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-220ENST00000581160 RREB1Q92766 1687 aa11.65□□□□□ -0.54
CDK5RAP3-220ENST00000581160 PI4KAP2A4QPH2 592 aa11.65□□□□□ -0.54
CDK5RAP3-220ENST00000581160 GNPATO15228 680 aa11.65□□□□□ -0.54
CDK5RAP3-220ENST00000581160 TRIM27P14373 513 aa11.65□□□□□ -0.54
CDK5RAP3-220ENST00000581160 TRAPPC3LQ5T215 181 aa11.65□□□□□ -0.54
CDK5RAP3-220ENST00000581160 TTLL7Q6ZT98 887 aa11.65□□□□□ -0.54
CDK5RAP3-220ENST00000581160 DZIP1LQ8IYY4 767 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-220ENST00000581160 PI4KAP1Q8N8J0 262 aa11.65□□□□□ -0.54
CDK5RAP3-220ENST00000581160 PLBD2Q8NHP8 589 aa11.65□□□□□ -0.54
CDK5RAP3-220ENST00000581160 C4BP0C0L5 1744 aa11.64□□□□□ -0.55
CDK5RAP3-220ENST00000581160 ERVV-1B6SEH8 477 aa11.64□□□□□ -0.55
CDK5RAP3-220ENST00000581160 ADRA2BP18089 450 aa11.64□□□□□ -0.55
CDK5RAP3-220ENST00000581160 RIC3Q7Z5B4 369 aa11.64□□□□□ -0.55
CDK5RAP3-220ENST00000581160 DZIP3Q86Y13 1208 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-220ENST00000581160 DNAAF4Q8WXU2 420 aa11.64□□□□□ -0.55
CDK5RAP3-220ENST00000581160 ARHGEF1Q92888 912 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-220ENST00000581160 TNNQ9UQP3 1299 aa11.64□□□□□ -0.55
CDK5RAP3-220ENST00000581160 ZNF330Q9Y3S2 320 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-220ENST00000581160 F6X3S4 739 aa11.63□□□□□ -0.55
CDK5RAP3-220ENST00000581160 RGL2O15211 777 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms