RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 FAM117AQ9C073 453 aa7.14□□□□□ -1.27
CDH8-206ENST00000580044 CHIC2Q9UKJ5 165 aa7.14□□□□□ -1.27
CDH8-206ENST00000580044 ZMYM4Q5VZL5 1548 aa7.13□□□□□ -1.27
CDH8-206ENST00000580044 GPATCH8Q9UKJ3 1502 aaKnown RBP7.13□□□□□ -1.27
CDH8-206ENST00000580044 USP47Q96K76 1375 aa7.13□□□□□ -1.27
CDH8-206ENST00000580044 PTGIRP43119 386 aa7.13□□□□□ -1.27
CDH8-206ENST00000580044 ZNF784Q8NCA9 323 aaPredicted RBP7.13□□□□□ -1.27
CDH8-206ENST00000580044 SCARF2Q96GP6 870 aaPredicted RBP7.13□□□□□ -1.27
CDH8-206ENST00000580044 GPBP1L1Q9HC44 474 aaPredicted RBP7.13□□□□□ -1.27
CDH8-206ENST00000580044 ADAMTS8Q9UP79 889 aa7.13□□□□□ -1.27
CDH8-206ENST00000580044 EIF2AK4Q9P2K8 1649 aaKnown RBP7.12□□□□□ -1.27
CDH8-206ENST00000580044 CARMIL2Q6F5E8 1435 aa7.12□□□□□ -1.27
CDH8-206ENST00000580044 RNF123Q5XPI4 1314 aa7.12□□□□□ -1.27
CDH8-206ENST00000580044 ERVH48-1M5A8F1 160 aa7.12□□□□□ -1.27
CDH8-206ENST00000580044 MCCD1P59942 119 aaPredicted RBP7.12□□□□□ -1.27
CDH8-206ENST00000580044 GMCL1Q96IK5 515 aa7.12□□□□□ -1.27
CDH8-206ENST00000580044 TMPRSS4Q9NRS4 437 aa7.12□□□□□ -1.27
CDH8-206ENST00000580044 SYNJ2O15056 1496 aa7.11□□□□□ -1.27
CDH8-206ENST00000580044 DHX29Q7Z478 1369 aaKnown RBP7.11□□□□□ -1.27
CDH8-206ENST00000580044 KIF15Q9NS87 1388 aa7.11□□□□□ -1.27
CDH8-206ENST00000580044 APBB1O00213 710 aa7.11□□□□□ -1.27
CDH8-206ENST00000580044 RFC5P40937 340 aa7.11□□□□□ -1.27
CDH8-206ENST00000580044 RASSF7Q02833 373 aa7.11□□□□□ -1.27
CDH8-206ENST00000580044 GPR161Q8N6U8 529 aaKnown RBP7.11□□□□□ -1.27
CDH8-206ENST00000580044 RNF217Q8TC41 542 aa7.11□□□□□ -1.27
CDH8-206ENST00000580044 NLRP3Q96P20 1036 aa7.11□□□□□ -1.27
CDH8-206ENST00000580044 BCL11AQ9H165 835 aa7.11□□□□□ -1.27
CDH8-206ENST00000580044 NUDCQ9Y266 331 aa7.11□□□□□ -1.27
CDH8-206ENST00000580044 PCDHB9Q9Y5E1 797 aa7.11□□□□□ -1.27
CDH8-206ENST00000580044 ABCA8O94911 1581 aa7.11□□□□□ -1.27
CDH8-206ENST00000580044 ANKRD50Q9ULJ7 1429 aa7.1□□□□□ -1.27
CDH8-206ENST00000580044 INSRP06213 1382 aa7.1□□□□□ -1.27
CDH8-206ENST00000580044 PREX2Q70Z35 1606 aa7.1□□□□□ -1.27
CDH8-206ENST00000580044 TRPM1Q7Z4N2 1603 aa7.1□□□□□ -1.27
CDH8-206ENST00000580044 ZBBXA8MT70 800 aa7.1□□□□□ -1.27
CDH8-206ENST00000580044 ATP5J2-PTCD1G3V325 749 aa7.1□□□□□ -1.27
CDH8-206ENST00000580044 H7C1W4 665 aa7.1□□□□□ -1.27
CDH8-206ENST00000580044 NBPF8Q3BBV2 869 aa7.1□□□□□ -1.27
CDH8-206ENST00000580044 SLC27A3Q5K4L6 730 aa7.1□□□□□ -1.27
CDH8-206ENST00000580044 FAM9BQ8IZU0 186 aa7.1□□□□□ -1.27
CDH8-206ENST00000580044 KCTD17Q8N5Z5 321 aa7.1□□□□□ -1.27
CDH8-206ENST00000580044 NSFL1CQ9UNZ2 370 aaKnown RBP7.1□□□□□ -1.27
CDH8-206ENST00000580044 UNC13BO14795 1591 aa7.1□□□□□ -1.27
CDH8-206ENST00000580044 BRD4O60885 1362 aaPredicted RBP7.09□□□□□ -1.27
CDH8-206ENST00000580044 MAST1Q9Y2H9 1570 aa7.09□□□□□ -1.27
CDH8-206ENST00000580044 KANK3Q6NY19 840 aa7.09□□□□□ -1.27
CDH8-206ENST00000580044 RIPOR1Q6ZS17 1223 aa7.09□□□□□ -1.27
CDH8-206ENST00000580044 PRICKLE2Q7Z3G6 844 aa7.09□□□□□ -1.27
CDH8-206ENST00000580044 TRERF1Q96PN7 1200 aa7.09□□□□□ -1.27
CDH8-206ENST00000580044 GOPCQ9HD26 462 aa7.09□□□□□ -1.27
CDH8-206ENST00000580044 CYLDQ9NQC7 956 aa7.09□□□□□ -1.27
CDH8-206ENST00000580044 CFDP1Q9UEE9 299 aaPredicted RBP7.09□□□□□ -1.27
CDH8-206ENST00000580044 MYO5CQ9NQX4 1742 aa7.09□□□□□ -1.27
CDH8-206ENST00000580044 PLEKHH2Q8IVE3 1493 aa7.09□□□□□ -1.27
CDH8-206ENST00000580044 PTPRGP23470 1445 aa7.09□□□□□ -1.28
CDH8-206ENST00000580044 C9orf84Q5VXU9 1444 aa7.09□□□□□ -1.28
CDH8-206ENST00000580044 MEN1O00255 615 aa7.08□□□□□ -1.28
CDH8-206ENST00000580044 GTF2E1P29083 439 aaPredicted RBP7.08□□□□□ -1.28
CDH8-206ENST00000580044 IRX6P78412 446 aaPredicted RBP7.08□□□□□ -1.28
CDH8-206ENST00000580044 SRSF11Q05519 484 aaKnown RBP7.08□□□□□ -1.28
CDH8-206ENST00000580044 RALBP1Q15311 655 aa7.08□□□□□ -1.28
CDH8-206ENST00000580044 NUP160Q12769 1436 aa7.08□□□□□ -1.28
CDH8-206ENST00000580044 PLXNC1O60486 1568 aa7.08□□□□□ -1.28
CDH8-206ENST00000580044 LRPPRCP42704 1394 aaKnown RBP7.08□□□□□ -1.28
CDH8-206ENST00000580044 ZNF608Q9ULD9 1512 aaPredicted RBP7.07□□□□□ -1.28
CDH8-206ENST00000580044 ABCC10Q5T3U5 1492 aa7.07□□□□□ -1.28
CDH8-206ENST00000580044 ESPNB1AK53 854 aa7.07□□□□□ -1.28
CDH8-206ENST00000580044 SLURP2P0DP57 97 aa7.07□□□□□ -1.28
CDH8-206ENST00000580044 GPC1P35052 558 aa7.07□□□□□ -1.28
CDH8-206ENST00000580044 ANP32AP39687 249 aaKnown RBP7.07□□□□□ -1.28
CDH8-206ENST00000580044 RNF144AP50876 292 aaPredicted RBP7.07□□□□□ -1.28
CDH8-206ENST00000580044 FOXK2Q01167 660 aa7.07□□□□□ -1.28
CDH8-206ENST00000580044 KRT76Q01546 638 aa7.07□□□□□ -1.28
CDH8-206ENST00000580044 CCDC184Q52MB2 194 aa7.07□□□□□ -1.28
CDH8-206ENST00000580044 ZNF385CQ66K41 422 aaPredicted RBP7.07□□□□□ -1.28
CDH8-206ENST00000580044 PODNQ7Z5L7 613 aa7.07□□□□□ -1.28
CDH8-206ENST00000580044 EPS8L1Q8TE68 723 aa7.07□□□□□ -1.28
CDH8-206ENST00000580044 PRG4Q92954 1404 aaPredicted RBP7.07□□□□□ -1.28
CDH8-206ENST00000580044 MYBBP1AQ9BQG0 1328 aaKnown RBP7.06□□□□□ -1.28
CDH8-206ENST00000580044 IQGAP3Q86VI3 1631 aa7.06□□□□□ -1.28
CDH8-206ENST00000580044 PHF20L1A8MW92 1017 aa7.06□□□□□ -1.28
CDH8-206ENST00000580044 ADAMTS2O95450 1211 aa7.06□□□□□ -1.28
CDH8-206ENST00000580044 IGHA1P01876 353 aa7.06□□□□□ -1.28
CDH8-206ENST00000580044 IRS1P35568 1242 aa7.06□□□□□ -1.28
CDH8-206ENST00000580044 PDE3BQ13370 1112 aa7.06□□□□□ -1.28
CDH8-206ENST00000580044 CYP2U1Q7Z449 544 aa7.06□□□□□ -1.28
CDH8-206ENST00000580044 CCDC136Q96JN2 1154 aa7.06□□□□□ -1.28
CDH8-206ENST00000580044 OCSTAMPQ9BR26 566 aa7.06□□□□□ -1.28
CDH8-206ENST00000580044 PRM3Q9NNZ6 103 aa7.06□□□□□ -1.28
CDH8-206ENST00000580044 HMX1Q9NP08 348 aaPredicted RBP7.06□□□□□ -1.28
CDH8-206ENST00000580044 NOP58Q9Y2X3 529 aaKnown RBP7.06□□□□□ -1.28
CDH8-206ENST00000580044 CDC42BPBQ9Y5S2 1711 aa7.06□□□□□ -1.28
CDH8-206ENST00000580044 FAM135AQ9P2D6 1515 aa7.06□□□□□ -1.28
CDH8-206ENST00000580044 RNF17Q9BXT8 1623 aaKnown RBP7.05□□□□□ -1.28
CDH8-206ENST00000580044 PLB1Q6P1J6 1458 aa7.05□□□□□ -1.28
CDH8-206ENST00000580044 CCDC141Q6ZP82 1450 aa7.05□□□□□ -1.28
CDH8-206ENST00000580044 WASHC2CQ9Y4E1 1318 aa7.05□□□□□ -1.28
CDH8-206ENST00000580044 LOC100996750A0A140TA64 210 aa7.05□□□□□ -1.28
CDH8-206ENST00000580044 LILRA1O75019 489 aa7.05□□□□□ -1.28
CDH8-206ENST00000580044 ADD1P35611 737 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms