RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 CHPF2Q9P2E5 772 aa17.73■□□□□ 0.43
TSEN54-206ENST00000579449 TJP1Q07157 1748 aa17.72■□□□□ 0.43
TSEN54-206ENST00000579449 IPO8O15397 1037 aaKnown RBP17.72■□□□□ 0.43
TSEN54-206ENST00000579449 C20orf194Q5TEA3 1177 aa17.72■□□□□ 0.43
TSEN54-206ENST00000579449 G2E3Q7L622 706 aa17.72■□□□□ 0.43
TSEN54-206ENST00000579449 DNAJC10Q8IXB1 793 aa17.72■□□□□ 0.43
TSEN54-206ENST00000579449 TEX13AQ9BXU3 409 aaPredicted RBP17.72■□□□□ 0.43
TSEN54-206ENST00000579449 TNNQ9UQP3 1299 aa17.72■□□□□ 0.43
TSEN54-206ENST00000579449 LOC102724428A0A0B4J2F2 783 aa17.71■□□□□ 0.43
TSEN54-206ENST00000579449 TRIM37O94972 964 aa17.71■□□□□ 0.43
TSEN54-206ENST00000579449 ANXA1P04083 346 aa17.71■□□□□ 0.43
TSEN54-206ENST00000579449 SIK1P57059 783 aa17.71■□□□□ 0.43
TSEN54-206ENST00000579449 FKBP8Q14318 412 aa17.71■□□□□ 0.43
TSEN54-206ENST00000579449 ATF7IPQ6VMQ6 1270 aa17.71■□□□□ 0.43
TSEN54-206ENST00000579449 PPP4R3CPQ6ZMV5 832 aa17.71■□□□□ 0.43
TSEN54-206ENST00000579449 DBF4Q9UBU7 674 aaPredicted RBP17.71■□□□□ 0.43
TSEN54-206ENST00000579449 TRIM27P14373 513 aa17.7■□□□□ 0.42
TSEN54-206ENST00000579449 PDIA6Q15084 440 aa17.7■□□□□ 0.42
TSEN54-206ENST00000579449 PROSER3Q2NL68 480 aa17.7■□□□□ 0.42
TSEN54-206ENST00000579449 ARHGAP45Q92619 1136 aa17.7■□□□□ 0.42
TSEN54-206ENST00000579449 DDX21Q9NR30 783 aaKnown RBP eCLIP17.7■□□□□ 0.42
TSEN54-206ENST00000579449 ZNF831Q5JPB2 1677 aa17.7■□□□□ 0.42
TSEN54-206ENST00000579449 CICQ96RK0 1608 aaPredicted RBP17.69■□□□□ 0.42
TSEN54-206ENST00000579449 FLIIQ13045 1269 aa17.69■□□□□ 0.42
TSEN54-206ENST00000579449 PDE3AQ14432 1141 aa17.69■□□□□ 0.42
TSEN54-206ENST00000579449 PHAXQ9H814 394 aaKnown RBP17.69■□□□□ 0.42
TSEN54-206ENST00000579449 GTF3C3Q9Y5Q9 886 aa17.69■□□□□ 0.42
TSEN54-206ENST00000579449 LY75O60449 1722 aa17.69■□□□□ 0.42
TSEN54-206ENST00000579449 PTPRCP08575 1304 aa17.69■□□□□ 0.42
TSEN54-206ENST00000579449 STARD3NLO95772 234 aa17.68■□□□□ 0.42
TSEN54-206ENST00000579449 A1BGP04217 495 aa17.68■□□□□ 0.42
TSEN54-206ENST00000579449 ATP6V1AP38606 617 aa17.68■□□□□ 0.42
TSEN54-206ENST00000579449 DZIP1LQ8IYY4 767 aaKnown RBP17.68■□□□□ 0.42
TSEN54-206ENST00000579449 PANK1Q8TE04 598 aa17.68■□□□□ 0.42
TSEN54-206ENST00000579449 CLUAP1Q96AJ1 413 aa17.68■□□□□ 0.42
TSEN54-206ENST00000579449 API5Q9BZZ5 524 aaKnown RBP17.68■□□□□ 0.42
TSEN54-206ENST00000579449 HYPKQ9NX55 129 aa17.68■□□□□ 0.42
TSEN54-206ENST00000579449 ERBB4Q15303 1308 aa17.68■□□□□ 0.42
TSEN54-206ENST00000579449 CYP19A1P11511 503 aaPredicted RBP17.67■□□□□ 0.42
TSEN54-206ENST00000579449 MS4A1P11836 297 aa17.67■□□□□ 0.42
TSEN54-206ENST00000579449 RLBP1P12271 317 aa17.67■□□□□ 0.42
TSEN54-206ENST00000579449 MYL6BP14649 208 aa17.67■□□□□ 0.42
TSEN54-206ENST00000579449 PIP4K2AP48426 406 aaPredicted RBP17.67■□□□□ 0.42
TSEN54-206ENST00000579449 NBPF26B4DH59 902 aa17.66■□□□□ 0.42
TSEN54-206ENST00000579449 ITPK1Q13572 414 aa17.66■□□□□ 0.42
TSEN54-206ENST00000579449 NBPF14Q5TI25 921 aa17.66■□□□□ 0.42
TSEN54-206ENST00000579449 NBPF10Q6P3W6 841 aaKnown RBP17.66■□□□□ 0.42
TSEN54-206ENST00000579449 FTSJ3Q8IY81 847 aaKnown RBP17.66■□□□□ 0.42
TSEN54-206ENST00000579449 NBPF15Q8N660 670 aa17.66■□□□□ 0.42
TSEN54-206ENST00000579449 CRBNQ96SW2 442 aa17.66■□□□□ 0.42
TSEN54-206ENST00000579449 COL5A3P25940 1745 aaPredicted RBP17.66■□□□□ 0.42
TSEN54-206ENST00000579449 FKBP5Q13451 457 aaPredicted RBP17.65■□□□□ 0.42
TSEN54-206ENST00000579449 LRP10Q7Z4F1 713 aa17.65■□□□□ 0.42
TSEN54-206ENST00000579449 MYH14Q7Z406 1995 aaKnown RBP17.64■□□□□ 0.41
TSEN54-206ENST00000579449 TAF1LQ8IZX4 1826 aa17.64■□□□□ 0.41
TSEN54-206ENST00000579449 EXOC6Q8TAG9 804 aa17.64■□□□□ 0.41
TSEN54-206ENST00000579449 ABCC4O15439 1325 aa17.64■□□□□ 0.41
TSEN54-206ENST00000579449 EP400Q96L91 3159 aa17.64■□□□□ 0.41
TSEN54-206ENST00000579449 KCNQ4P56696 695 aa17.63■□□□□ 0.41
TSEN54-206ENST00000579449 AIMP1Q12904 312 aaKnown RBP17.63■□□□□ 0.41
TSEN54-206ENST00000579449 TMEM57Q8N5G2 664 aa17.63■□□□□ 0.41
TSEN54-206ENST00000579449 XAGE3Q8WTP9 111 aa17.63■□□□□ 0.41
TSEN54-206ENST00000579449 CCNL1Q9UK58 526 aaPredicted RBP17.63■□□□□ 0.41
TSEN54-206ENST00000579449 COG6Q9Y2V7 657 aa17.63■□□□□ 0.41
TSEN54-206ENST00000579449 RREB1Q92766 1687 aa17.63■□□□□ 0.41
TSEN54-206ENST00000579449 TNS1Q9HBL0 1735 aaKnown RBP17.63■□□□□ 0.41
TSEN54-206ENST00000579449 F6X3S4 739 aa17.62■□□□□ 0.41
TSEN54-206ENST00000579449 CRKLP46109 303 aaKnown RBP17.62■□□□□ 0.41
TSEN54-206ENST00000579449 COPS6Q7L5N1 327 aa17.62■□□□□ 0.41
TSEN54-206ENST00000579449 LINC00116Q8NCU8 138 aa17.62■□□□□ 0.41
TSEN54-206ENST00000579449 MVPQ14764 893 aaKnown RBP17.61■□□□□ 0.41
TSEN54-206ENST00000579449 INTS5Q6P9B9 1019 aaKnown RBP17.61■□□□□ 0.41
TSEN54-206ENST00000579449 CCDC87Q9NVE4 849 aa17.61■□□□□ 0.41
TSEN54-206ENST00000579449 ZBTB1Q9Y2K1 713 aa17.61■□□□□ 0.41
TSEN54-206ENST00000579449 PI4KAP2A4QPH2 592 aa17.6■□□□□ 0.41
TSEN54-206ENST00000579449 DDX58O95786 925 aaKnown RBP17.6■□□□□ 0.41
TSEN54-206ENST00000579449 APBA3O96018 575 aa17.6■□□□□ 0.41
TSEN54-206ENST00000579449 ERICH6BQ5W0A0 696 aa17.6■□□□□ 0.41
TSEN54-206ENST00000579449 ITPRIPQ8IWB1 547 aa17.6■□□□□ 0.41
TSEN54-206ENST00000579449 PI4KAP1Q8N8J0 262 aa17.6■□□□□ 0.41
TSEN54-206ENST00000579449 ADCY9O60503 1353 aa17.6■□□□□ 0.41
TSEN54-206ENST00000579449 N4BP2Q86UW6 1770 aaPredicted RBP17.59■□□□□ 0.41
TSEN54-206ENST00000579449 INTS3Q68E01 1043 aaKnown RBP17.59■□□□□ 0.41
TSEN54-206ENST00000579449 SLC4A10Q6U841 1118 aa17.59■□□□□ 0.41
TSEN54-206ENST00000579449 KSR2Q6VAB6 950 aa17.59■□□□□ 0.41
TSEN54-206ENST00000579449 PLSCR1O15162 318 aa17.58■□□□□ 0.4
TSEN54-206ENST00000579449 TTLL7Q6ZT98 887 aa17.58■□□□□ 0.4
TSEN54-206ENST00000579449 DNAAF4Q8WXU2 420 aa17.58■□□□□ 0.4
TSEN54-206ENST00000579449 LRRC4BQ9NT99 713 aa17.58■□□□□ 0.4
TSEN54-206ENST00000579449 MAP3K2Q9Y2U5 619 aa17.58■□□□□ 0.4
TSEN54-206ENST00000579449 ZNF330Q9Y3S2 320 aaPredicted RBP17.58■□□□□ 0.4
TSEN54-206ENST00000579449 ARFGEF2Q9Y6D5 1785 aa17.58■□□□□ 0.4
TSEN54-206ENST00000579449 PXDNLA1KZ92 1463 aa17.57■□□□□ 0.4
TSEN54-206ENST00000579449 CNTNAP4Q9C0A0 1308 aa17.57■□□□□ 0.4
TSEN54-206ENST00000579449 IL6STP40189 918 aaPredicted RBP17.57■□□□□ 0.4
TSEN54-206ENST00000579449 SLC27A3Q5K4L6 730 aa17.57■□□□□ 0.4
TSEN54-206ENST00000579449 RC3H1Q5TC82 1133 aaKnown RBP17.57■□□□□ 0.4
TSEN54-206ENST00000579449 ANKRD13DQ6ZTN6 518 aa17.57■□□□□ 0.4
TSEN54-206ENST00000579449 RIC3Q7Z5B4 369 aa17.57■□□□□ 0.4
TSEN54-206ENST00000579449 C4BP0C0L5 1744 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms