RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 KDM4AO75164 1064 aa5.64□□□□□ -1.51
SMARCE1-215ENST00000578995 ADAMTS2O95450 1211 aa5.64□□□□□ -1.51
SMARCE1-215ENST00000578995 USP46P62068 366 aa5.64□□□□□ -1.51
SMARCE1-215ENST00000578995 SV2AQ7L0J3 742 aa5.64□□□□□ -1.51
SMARCE1-215ENST00000578995 PODNQ7Z5L7 613 aa5.64□□□□□ -1.51
SMARCE1-215ENST00000578995 CCDC155Q8N6L0 562 aa5.64□□□□□ -1.51
SMARCE1-215ENST00000578995 ITPKCQ96DU7 683 aa5.64□□□□□ -1.51
SMARCE1-215ENST00000578995 ARHGEF28Q8N1W1 1705 aaKnown RBP5.64□□□□□ -1.51
SMARCE1-215ENST00000578995 TMEM2Q9UHN6 1383 aa5.64□□□□□ -1.51
SMARCE1-215ENST00000578995 ADAMTS13Q76LX8 1427 aa5.64□□□□□ -1.51
SMARCE1-215ENST00000578995 ALKQ9UM73 1620 aa5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 NALCNQ8IZF0 1738 aa5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 HSPA2P54652 639 aa5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 LINC01559Q495D7 138 aa5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 FAM174AQ8TBP5 190 aa5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 NLRP7Q8WX94 980 aa5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 BBXQ8WY36 941 aaPredicted RBP5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 BAP1Q92560 729 aa5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 TRIM52Q96A61 297 aa5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 ESF1Q9H501 851 aaKnown RBP5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 SLC52A1Q9NWF4 448 aa5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 CCDC144AA2RUR9 1427 aa5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 PRAG1Q86YV5 1406 aa5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 RIMS2Q9UQ26 1411 aa5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 ADGRB1O14514 1584 aa5.63□□□□□ -1.51
SMARCE1-215ENST00000578995 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
SMARCE1-215ENST00000578995 CELA2BP08218 269 aaPredicted RBP5.62□□□□□ -1.51
SMARCE1-215ENST00000578995 CCNYL3P0C7X3 344 aa5.62□□□□□ -1.51
SMARCE1-215ENST00000578995 SRSF11Q05519 484 aaKnown RBP5.62□□□□□ -1.51
SMARCE1-215ENST00000578995 NR5A1Q13285 461 aa5.62□□□□□ -1.51
SMARCE1-215ENST00000578995 VWA5B2Q8N398 1253 aa5.62□□□□□ -1.51
SMARCE1-215ENST00000578995 MEIOBQ8N635 442 aa5.62□□□□□ -1.51
SMARCE1-215ENST00000578995 ZNF511Q8NB15 262 aa5.62□□□□□ -1.51
SMARCE1-215ENST00000578995 PCGF6Q9BYE7 350 aa5.62□□□□□ -1.51
SMARCE1-215ENST00000578995 UNC93B1Q9H1C4 597 aa5.62□□□□□ -1.51
SMARCE1-215ENST00000578995 CNTNAP5Q8WYK1 1306 aa5.62□□□□□ -1.51
SMARCE1-215ENST00000578995 PIK3C2GO75747 1445 aa5.62□□□□□ -1.51
SMARCE1-215ENST00000578995 CDC14CA4D256 554 aa5.61□□□□□ -1.51
SMARCE1-215ENST00000578995 TTLL8A6PVC2 850 aa5.61□□□□□ -1.51
SMARCE1-215ENST00000578995 SPTLC1O15269 473 aa5.61□□□□□ -1.51
SMARCE1-215ENST00000578995 NPHP4O75161 1426 aaPredicted RBP5.61□□□□□ -1.51
SMARCE1-215ENST00000578995 CD46P15529 392 aa5.61□□□□□ -1.51
SMARCE1-215ENST00000578995 LTKP29376 864 aa5.61□□□□□ -1.51
SMARCE1-215ENST00000578995 CPS1P31327 1500 aa5.61□□□□□ -1.51
SMARCE1-215ENST00000578995 CDK15Q96Q40 435 aa5.61□□□□□ -1.51
SMARCE1-215ENST00000578995 PLEKHG1Q9ULL1 1385 aa5.61□□□□□ -1.51
SMARCE1-215ENST00000578995 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-215ENST00000578995 GNPATO15228 680 aa5.6□□□□□ -1.51
SMARCE1-215ENST00000578995 FURINP09958 794 aa5.6□□□□□ -1.51
SMARCE1-215ENST00000578995 ITGA6P23229 1130 aa5.6□□□□□ -1.51
SMARCE1-215ENST00000578995 RETREG3Q86VR2 466 aa5.6□□□□□ -1.51
SMARCE1-215ENST00000578995 SPRYD3Q8NCJ5 442 aa5.6□□□□□ -1.51
SMARCE1-215ENST00000578995 TSEN34Q9BSV6 310 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-215ENST00000578995 RGPD8O14715 1765 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-215ENST00000578995 PTPRUQ92729 1446 aa5.59□□□□□ -1.51
SMARCE1-215ENST00000578995 SLC35F4A4IF30 521 aa5.59□□□□□ -1.51
SMARCE1-215ENST00000578995 MS4A1P11836 297 aa5.59□□□□□ -1.51
SMARCE1-215ENST00000578995 HLA-CQ95604 372 aa5.59□□□□□ -1.51
SMARCE1-215ENST00000578995 EVA1BQ9NVM1 165 aa5.59□□□□□ -1.51
SMARCE1-215ENST00000578995 HOXA2O43364 376 aa5.58□□□□□ -1.52
SMARCE1-215ENST00000578995 ARID5BQ14865 1188 aa5.58□□□□□ -1.52
SMARCE1-215ENST00000578995 THEMISQ8N1K5 641 aaPredicted RBP5.58□□□□□ -1.52
SMARCE1-215ENST00000578995 PHOX2BQ99453 314 aa5.58□□□□□ -1.52
SMARCE1-215ENST00000578995 QRICH2Q9H0J4 1663 aa5.58□□□□□ -1.52
SMARCE1-215ENST00000578995 ADGRB2O60241 1585 aa5.58□□□□□ -1.52
SMARCE1-215ENST00000578995 NKTRP30414 1462 aaKnown RBP5.58□□□□□ -1.52
SMARCE1-215ENST00000578995 TECPR2O15040 1411 aa5.57□□□□□ -1.52
SMARCE1-215ENST00000578995 FMN2Q9NZ56 1722 aa5.57□□□□□ -1.52
SMARCE1-215ENST00000578995 TOPAZ1Q8N9V7 1692 aa5.57□□□□□ -1.52
SMARCE1-215ENST00000578995 ADGRF5Q8IZF2 1346 aa5.57□□□□□ -1.52
SMARCE1-215ENST00000578995 USP32Q8NFA0 1604 aa5.57□□□□□ -1.52
SMARCE1-215ENST00000578995 FIGNL2A6NMB9 653 aa5.57□□□□□ -1.52
SMARCE1-215ENST00000578995 KCNH2Q12809 1159 aa5.57□□□□□ -1.52
SMARCE1-215ENST00000578995 PTPRNQ16849 979 aa5.57□□□□□ -1.52
SMARCE1-215ENST00000578995 NEDD1Q8NHV4 660 aa5.57□□□□□ -1.52
SMARCE1-215ENST00000578995 SYMPKQ92797 1274 aaKnown RBP5.57□□□□□ -1.52
SMARCE1-215ENST00000578995 SIN3AQ96ST3 1273 aa5.57□□□□□ -1.52
SMARCE1-215ENST00000578995 LRRC7Q96NW7 1537 aa5.57□□□□□ -1.52
SMARCE1-215ENST00000578995 DLC1Q96QB1 1528 aa5.57□□□□□ -1.52
SMARCE1-215ENST00000578995 METP08581 1390 aa5.56□□□□□ -1.52
SMARCE1-215ENST00000578995 RPGRIP1LQ68CZ1 1315 aa5.56□□□□□ -1.52
SMARCE1-215ENST00000578995 CLSPNQ9HAW4 1339 aa5.56□□□□□ -1.52
SMARCE1-215ENST00000578995 NR3C2P08235 984 aa5.56□□□□□ -1.52
SMARCE1-215ENST00000578995 IQSEC2Q5JU85 1478 aa5.56□□□□□ -1.52
SMARCE1-215ENST00000578995 RALGAPBQ86X10 1494 aa5.56□□□□□ -1.52
SMARCE1-215ENST00000578995 PIK3R4Q99570 1358 aa5.55□□□□□ -1.52
SMARCE1-215ENST00000578995 SH3RF1Q7Z6J0 888 aa5.55□□□□□ -1.52
SMARCE1-215ENST00000578995 TXNDC2Q86VQ3 553 aa5.55□□□□□ -1.52
SMARCE1-215ENST00000578995 ANKLE2Q86XL3 938 aa5.55□□□□□ -1.52
SMARCE1-215ENST00000578995 PTCH1Q13635 1447 aa5.55□□□□□ -1.52
SMARCE1-215ENST00000578995 CDC42BPGQ6DT37 1551 aa5.55□□□□□ -1.52
SMARCE1-215ENST00000578995 GPRASP1Q5JY77 1395 aa5.55□□□□□ -1.52
SMARCE1-215ENST00000578995 ZNF335Q9H4Z2 1342 aaPredicted RBP5.54□□□□□ -1.52
SMARCE1-215ENST00000578995 NUTM2DQ5VT03 806 aaPredicted RBP5.54□□□□□ -1.52
SMARCE1-215ENST00000578995 ALYREFQ86V81 257 aaKnown RBP5.54□□□□□ -1.52
SMARCE1-215ENST00000578995 NHSL1Q5SYE7 1610 aa5.54□□□□□ -1.52
SMARCE1-215ENST00000578995 ITSN1Q15811 1721 aa5.54□□□□□ -1.52
SMARCE1-215ENST00000578995 MYOM1P52179 1685 aa5.53□□□□□ -1.52
SMARCE1-215ENST00000578995 AKAP12Q02952 1782 aa5.53□□□□□ -1.52
SMARCE1-215ENST00000578995 BCRP11274 1271 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms