RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 PDZRN3Q9UPQ7 1066 aa25.39■■□□□ 1.66
SMG8-203ENST00000578922 SLIT2O94813 1529 aa25.39■■□□□ 1.66
SMG8-203ENST00000578922 PI4KAP2A4QPH2 592 aa25.38■■□□□ 1.65
SMG8-203ENST00000578922 PTCD1O75127 700 aaKnown RBP25.38■■□□□ 1.65
SMG8-203ENST00000578922 MYL6BP14649 208 aa25.38■■□□□ 1.65
SMG8-203ENST00000578922 PIP4K2AP48426 406 aaPredicted RBP25.38■■□□□ 1.65
SMG8-203ENST00000578922 SIRT2Q8IXJ6 389 aa25.38■■□□□ 1.65
SMG8-203ENST00000578922 PI4KAP1Q8N8J0 262 aa25.38■■□□□ 1.65
SMG8-203ENST00000578922 TMOD3Q9NYL9 352 aa25.38■■□□□ 1.65
SMG8-203ENST00000578922 SPATA31A5Q5VU36 1347 aa25.38■■□□□ 1.65
SMG8-203ENST00000578922 SPATA31A7Q8IWB4 1347 aa25.38■■□□□ 1.65
SMG8-203ENST00000578922 TOGARAM1Q9Y4F4 1720 aa25.38■■□□□ 1.65
SMG8-203ENST00000578922 HSPA1LP34931 641 aa25.37■■□□□ 1.65
SMG8-203ENST00000578922 AIMP1Q12904 312 aaKnown RBP25.37■■□□□ 1.65
SMG8-203ENST00000578922 PDIA6Q15084 440 aa25.37■■□□□ 1.65
SMG8-203ENST00000578922 DDX21Q9NR30 783 aaKnown RBP eCLIP25.36■■□□□ 1.65
SMG8-203ENST00000578922 KAT6BQ8WYB5 2073 aa25.35■■□□□ 1.65
SMG8-203ENST00000578922 UNC5CLQ8IV45 518 aa25.35■■□□□ 1.65
SMG8-203ENST00000578922 HYPKQ9NX55 129 aa25.35■■□□□ 1.65
SMG8-203ENST00000578922 THRAP3Q9Y2W1 955 aaKnown RBP25.35■■□□□ 1.65
SMG8-203ENST00000578922 WNK3Q9BYP7 1800 aa25.35■■□□□ 1.65
SMG8-203ENST00000578922 NWD2Q9ULI1 1742 aa25.34■■□□□ 1.65
SMG8-203ENST00000578922 DDB1Q16531 1140 aa25.34■■□□□ 1.65
SMG8-203ENST00000578922 DNAAF4Q8WXU2 420 aa25.34■■□□□ 1.65
SMG8-203ENST00000578922 PIGBQ92521 554 aa25.34■■□□□ 1.65
SMG8-203ENST00000578922 ADCY9O60503 1353 aa25.34■■□□□ 1.65
SMG8-203ENST00000578922 SYTL4Q96C24 671 aaPredicted RBP25.34■■□□□ 1.65
SMG8-203ENST00000578922 TNS2Q63HR2 1409 aa25.33■■□□□ 1.65
SMG8-203ENST00000578922 C8orf34Q49A92 452 aa25.33■■□□□ 1.65
SMG8-203ENST00000578922 LRP6O75581 1613 aa25.32■■□□□ 1.64
SMG8-203ENST00000578922 SMC5Q8IY18 1101 aa25.32■■□□□ 1.64
SMG8-203ENST00000578922 CDCA7Q9BWT1 371 aaPredicted RBP25.32■■□□□ 1.64
SMG8-203ENST00000578922 ASAP1Q9ULH1 1129 aa25.32■■□□□ 1.64
SMG8-203ENST00000578922 MAP3K2Q9Y2U5 619 aa25.32■■□□□ 1.64
SMG8-203ENST00000578922 A0A0G2JS52 829 aa25.31■■□□□ 1.64
SMG8-203ENST00000578922 SRCIN1Q9C0H9 1055 aa25.31■■□□□ 1.64
SMG8-203ENST00000578922 GLI3P10071 1580 aa25.31■■□□□ 1.64
SMG8-203ENST00000578922 CEP85Q6P2H3 762 aa25.31■■□□□ 1.64
SMG8-203ENST00000578922 PXDNLA1KZ92 1463 aa25.31■■□□□ 1.64
SMG8-203ENST00000578922 SPATA31A6Q5VVP1 1343 aa25.3■■□□□ 1.64
SMG8-203ENST00000578922 ATP10DQ9P241 1426 aa25.3■■□□□ 1.64
SMG8-203ENST00000578922 FAM98CQ17RN3 349 aaKnown RBP25.3■■□□□ 1.64
SMG8-203ENST00000578922 BCL9LQ86UU0 1499 aa25.3■■□□□ 1.64
SMG8-203ENST00000578922 KCPQ6ZWJ8 1503 aa25.3■■□□□ 1.64
SMG8-203ENST00000578922 BEND3Q5T5X7 828 aa25.29■■□□□ 1.64
SMG8-203ENST00000578922 KSR2Q6VAB6 950 aa25.29■■□□□ 1.64
SMG8-203ENST00000578922 ANKRD44Q8N8A2 993 aa25.29■■□□□ 1.64
SMG8-203ENST00000578922 XAGE3Q8WTP9 111 aa25.29■■□□□ 1.64
SMG8-203ENST00000578922 USP44Q9H0E7 712 aa25.28■■□□□ 1.64
SMG8-203ENST00000578922 PAPPAQ13219 1627 aa25.28■■□□□ 1.64
SMG8-203ENST00000578922 GNAI2P04899 355 aa25.28■■□□□ 1.64
SMG8-203ENST00000578922 MEX3CQ5U5Q3 659 aaKnown RBP25.28■■□□□ 1.64
SMG8-203ENST00000578922 COPS6Q7L5N1 327 aa25.28■■□□□ 1.64
SMG8-203ENST00000578922 UBR2Q8IWV8 1755 aa25.27■■□□□ 1.64
SMG8-203ENST00000578922 GNAI3P08754 354 aa25.27■■□□□ 1.64
SMG8-203ENST00000578922 PRIM1P49642 420 aaKnown RBP25.27■■□□□ 1.64
SMG8-203ENST00000578922 BARGINQ6ZT62 677 aa25.27■■□□□ 1.64
SMG8-203ENST00000578922 ATG3Q9NT62 314 aa25.27■■□□□ 1.64
SMG8-203ENST00000578922 DDX58O95786 925 aaKnown RBP25.27■■□□□ 1.64
SMG8-203ENST00000578922 RPAP2Q8IXW5 612 aaPredicted RBP25.27■■□□□ 1.64
SMG8-203ENST00000578922 MARCH10Q8NA82 808 aaPredicted RBP25.27■■□□□ 1.64
SMG8-203ENST00000578922 USP21Q9UK80 565 aa25.27■■□□□ 1.64
SMG8-203ENST00000578922 ITGB4P16144 1822 aa25.26■■□□□ 1.63
SMG8-203ENST00000578922 RBM42Q9BTD8 480 aaKnown RBP25.26■■□□□ 1.63
SMG8-203ENST00000578922 VPS72Q15906 364 aa25.25■■□□□ 1.63
SMG8-203ENST00000578922 ANKRD45Q5TZF3 282 aa25.25■■□□□ 1.63
SMG8-203ENST00000578922 RIC3Q7Z5B4 369 aa25.25■■□□□ 1.63
SMG8-203ENST00000578922 FNBP4Q8N3X1 1017 aaPredicted RBP25.25■■□□□ 1.63
SMG8-203ENST00000578922 ACSBG1Q96GR2 724 aa25.25■■□□□ 1.63
SMG8-203ENST00000578922 LNPKQ9C0E8 428 aa25.25■■□□□ 1.63
SMG8-203ENST00000578922 A1BGP04217 495 aa25.25■■□□□ 1.63
SMG8-203ENST00000578922 UBTFL1P0CB47 393 aaPredicted RBP25.25■■□□□ 1.63
SMG8-203ENST00000578922 GCC1Q96CN9 775 aa25.25■■□□□ 1.63
SMG8-203ENST00000578922 DAXXQ9UER7 740 aaPredicted RBP25.25■■□□□ 1.63
SMG8-203ENST00000578922 LRRFIP2Q9Y608 721 aaKnown RBP25.25■■□□□ 1.63
SMG8-203ENST00000578922 N4BP2Q86UW6 1770 aaPredicted RBP25.24■■□□□ 1.63
SMG8-203ENST00000578922 NUCB1Q02818 461 aa25.24■■□□□ 1.63
SMG8-203ENST00000578922 LRP10Q7Z4F1 713 aa25.24■■□□□ 1.63
SMG8-203ENST00000578922 CWF19L2Q2TBE0 894 aaKnown RBP25.24■■□□□ 1.63
SMG8-203ENST00000578922 BCL9O00512 1426 aa25.23■■□□□ 1.63
SMG8-203ENST00000578922 LAMB4A4D0S4 1761 aa25.23■■□□□ 1.63
SMG8-203ENST00000578922 NBPF26B4DH59 902 aa25.23■■□□□ 1.63
SMG8-203ENST00000578922 NBPF14Q5TI25 921 aa25.23■■□□□ 1.63
SMG8-203ENST00000578922 NBPF10Q6P3W6 841 aaKnown RBP25.23■■□□□ 1.63
SMG8-203ENST00000578922 NBPF15Q8N660 670 aa25.23■■□□□ 1.63
SMG8-203ENST00000578922 NBPF7P0C2Y1 421 aaPredicted RBP25.22■■□□□ 1.63
SMG8-203ENST00000578922 CHD1LQ86WJ1 897 aa25.22■■□□□ 1.63
SMG8-203ENST00000578922 DOT1LQ8TEK3 1739 aa25.21■■□□□ 1.63
SMG8-203ENST00000578922 APBB1O00213 710 aa25.21■■□□□ 1.63
SMG8-203ENST00000578922 ANKRD13DQ6ZTN6 518 aa25.2■■□□□ 1.62
SMG8-203ENST00000578922 DNAJC10Q8IXB1 793 aa25.2■■□□□ 1.62
SMG8-203ENST00000578922 DCTPP1Q9H773 170 aa25.2■■□□□ 1.62
SMG8-203ENST00000578922 PNMA6EA0A0J9YXQ4 647 aa25.18■■□□□ 1.62
SMG8-203ENST00000578922 MYD88Q99836 296 aa25.18■■□□□ 1.62
SMG8-203ENST00000578922 HMMRO75330 724 aa25.18■■□□□ 1.62
SMG8-203ENST00000578922 LINS1Q8NG48 757 aa25.18■■□□□ 1.62
SMG8-203ENST00000578922 C9orf78Q9NZ63 289 aaPredicted RBP25.18■■□□□ 1.62
SMG8-203ENST00000578922 ZNF330Q9Y3S2 320 aaPredicted RBP25.18■■□□□ 1.62
SMG8-203ENST00000578922 ALDH1L1O75891 902 aa25.17■■□□□ 1.62
SMG8-203ENST00000578922 AFF2P51816 1311 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms