RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 H0YIN7 160 aa12.41□□□□□ -0.42
SNX11-205ENST00000578861 HABP4Q5JVS0 413 aaKnown RBP12.41□□□□□ -0.42
SNX11-205ENST00000578861 ZNF622Q969S3 477 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNX11-205ENST00000578861 COG3Q96JB2 828 aa12.41□□□□□ -0.42
SNX11-205ENST00000578861 A0A1W2PP64 1363 aa12.41□□□□□ -0.42
SNX11-205ENST00000578861 TONSLQ96HA7 1378 aa12.41□□□□□ -0.42
SNX11-205ENST00000578861 RRS1Q15050 365 aaKnown RBP12.4□□□□□ -0.42
SNX11-205ENST00000578861 NBPF15Q8N660 670 aa12.4□□□□□ -0.42
SNX11-205ENST00000578861 SLC4A9Q96Q91 983 aa12.4□□□□□ -0.42
SNX11-205ENST00000578861 HACL1Q9UJ83 578 aa12.4□□□□□ -0.42
SNX11-205ENST00000578861 FAM208AQ9UK61 1670 aaKnown RBP12.39□□□□□ -0.43
SNX11-205ENST00000578861 CA12O43570 354 aa12.39□□□□□ -0.43
SNX11-205ENST00000578861 EPHX2P34913 555 aa12.39□□□□□ -0.43
SNX11-205ENST00000578861 FMR1Q06787 632 aaKnown RBP eCLIP12.39□□□□□ -0.43
SNX11-205ENST00000578861 DDX21Q9NR30 783 aaKnown RBP eCLIP12.39□□□□□ -0.43
SNX11-205ENST00000578861 SPG7Q9UQ90 795 aa12.39□□□□□ -0.43
SNX11-205ENST00000578861 VIRMAQ69YN4 1812 aaKnown RBP12.39□□□□□ -0.43
SNX11-205ENST00000578861 CNTNAP4Q9C0A0 1308 aa12.38□□□□□ -0.43
SNX11-205ENST00000578861 ZPR1O75312 459 aa12.38□□□□□ -0.43
SNX11-205ENST00000578861 TM4SF1P30408 202 aa12.38□□□□□ -0.43
SNX11-205ENST00000578861 MAP2K2P36507 400 aa12.38□□□□□ -0.43
SNX11-205ENST00000578861 NKX1-1Q15270 411 aaPredicted RBP12.38□□□□□ -0.43
SNX11-205ENST00000578861 TAOK3Q9H2K8 898 aa12.38□□□□□ -0.43
SNX11-205ENST00000578861 USP42Q9H9J4 1324 aaKnown RBP12.37□□□□□ -0.43
SNX11-205ENST00000578861 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
SNX11-205ENST00000578861 PNMA8AQ86V59 439 aaPredicted RBP12.37□□□□□ -0.43
SNX11-205ENST00000578861 L3MBTL3Q96JM7 780 aaPredicted RBP12.37□□□□□ -0.43
SNX11-205ENST00000578861 ST20-MTHFSA0A0A6YYL1 179 aa12.36□□□□□ -0.43
SNX11-205ENST00000578861 CRKLP46109 303 aaKnown RBP12.36□□□□□ -0.43
SNX11-205ENST00000578861 USPL1Q5W0Q7 1092 aa12.36□□□□□ -0.43
SNX11-205ENST00000578861 TIAM2Q8IVF5 1701 aa12.36□□□□□ -0.43
SNX11-205ENST00000578861 PTCD1O75127 700 aaKnown RBP12.35□□□□□ -0.43
SNX11-205ENST00000578861 SERPINB2P05120 415 aa12.35□□□□□ -0.43
SNX11-205ENST00000578861 HSP90AB2PQ58FF8 381 aa12.35□□□□□ -0.43
SNX11-205ENST00000578861 NFIXQ14938 502 aa12.34□□□□□ -0.43
SNX11-205ENST00000578861 CIAPIN1Q6FI81 312 aa12.34□□□□□ -0.43
SNX11-205ENST00000578861 PUS7Q96PZ0 661 aaKnown RBP12.34□□□□□ -0.43
SNX11-205ENST00000578861 TESK2Q96S53 571 aa12.34□□□□□ -0.43
SNX11-205ENST00000578861 RNF123Q5XPI4 1314 aa12.34□□□□□ -0.43
SNX11-205ENST00000578861 TRAF5O00463 557 aa12.33□□□□□ -0.44
SNX11-205ENST00000578861 BICDL1Q6ZP65 573 aa12.33□□□□□ -0.44
SNX11-205ENST00000578861 BRPF1P55201 1214 aaPredicted RBP12.32□□□□□ -0.44
SNX11-205ENST00000578861 CST9Q5W186 159 aa12.32□□□□□ -0.44
SNX11-205ENST00000578861 IFNL2Q8IZJ0 200 aa12.32□□□□□ -0.44
SNX11-205ENST00000578861 TLL2Q9Y6L7 1015 aa12.32□□□□□ -0.44
SNX11-205ENST00000578861 ZNF541Q9H0D2 1346 aa12.32□□□□□ -0.44
SNX11-205ENST00000578861 MAP2P11137 1827 aaKnown RBP12.32□□□□□ -0.44
SNX11-205ENST00000578861 KIF20BQ96Q89 1820 aa12.32□□□□□ -0.44
SNX11-205ENST00000578861 KDRP35968 1356 aa12.31□□□□□ -0.44
SNX11-205ENST00000578861 CASP8AP2Q9UKL3 1982 aa12.31□□□□□ -0.44
SNX11-205ENST00000578861 CCDC24Q8N4L8 307 aa12.31□□□□□ -0.44
SNX11-205ENST00000578861 SLC17A8Q8NDX2 589 aa12.31□□□□□ -0.44
SNX11-205ENST00000578861 PHKG2P15735 406 aa12.3□□□□□ -0.44
SNX11-205ENST00000578861 FXR1P51114 621 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNX11-205ENST00000578861 GGNBP2Q9H3C7 697 aa12.3□□□□□ -0.44
SNX11-205ENST00000578861 LTBP3Q9NS15 1303 aa12.3□□□□□ -0.44
SNX11-205ENST00000578861 ITGB4P16144 1822 aa12.3□□□□□ -0.44
SNX11-205ENST00000578861 RTL1A6NKG5 1358 aa12.3□□□□□ -0.44
SNX11-205ENST00000578861 FYB1O15117 783 aa12.28□□□□□ -0.44
SNX11-205ENST00000578861 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
SNX11-205ENST00000578861 CABP4P57796 275 aa12.28□□□□□ -0.44
SNX11-205ENST00000578861 ZNF277Q9NRM2 450 aaPredicted RBP12.28□□□□□ -0.44
SNX11-205ENST00000578861 GJA3Q9Y6H8 435 aa12.28□□□□□ -0.44
SNX11-205ENST00000578861 CARMIL3Q8ND23 1372 aa12.28□□□□□ -0.44
SNX11-205ENST00000578861 PPM1GO15355 546 aaPredicted RBP12.27□□□□□ -0.45
SNX11-205ENST00000578861 CELF2O95319 508 aaKnown RBP12.27□□□□□ -0.45
SNX11-205ENST00000578861 PDE6BP35913 854 aa12.27□□□□□ -0.45
SNX11-205ENST00000578861 INTS5Q6P9B9 1019 aaKnown RBP12.27□□□□□ -0.45
SNX11-205ENST00000578861 SAPCD2Q86UD0 394 aa12.27□□□□□ -0.45
SNX11-205ENST00000578861 ZNF408Q9H9D4 720 aa12.27□□□□□ -0.45
SNX11-205ENST00000578861 LTBP1Q14766 1721 aa12.27□□□□□ -0.45
SNX11-205ENST00000578861 CCDC88AQ3V6T2 1871 aa12.27□□□□□ -0.45
SNX11-205ENST00000578861 NPHP1O15259 732 aa12.26□□□□□ -0.45
SNX11-205ENST00000578861 LMOD1P29536 600 aaPredicted RBP12.26□□□□□ -0.45
SNX11-205ENST00000578861 SOGA3Q5TF21 947 aa12.26□□□□□ -0.45
SNX11-205ENST00000578861 PRPF40BQ6NWY9 871 aaKnown RBP12.26□□□□□ -0.45
SNX11-205ENST00000578861 ZIC5Q96T25 663 aa12.26□□□□□ -0.45
SNX11-205ENST00000578861 HPS5Q9UPZ3 1129 aa12.26□□□□□ -0.45
SNX11-205ENST00000578861 INSRP06213 1382 aa12.26□□□□□ -0.45
SNX11-205ENST00000578861 ERVV-2B6SEH9 535 aa12.25□□□□□ -0.45
SNX11-205ENST00000578861 CNKSR1Q969H4 720 aa12.25□□□□□ -0.45
SNX11-205ENST00000578861 NARFQ9UHQ1 456 aa12.25□□□□□ -0.45
SNX11-205ENST00000578861 TRPA1O75762 1119 aa12.24□□□□□ -0.45
SNX11-205ENST00000578861 CTU1Q7Z7A3 348 aaKnown RBP12.24□□□□□ -0.45
SNX11-205ENST00000578861 BRIP1Q9BX63 1249 aa12.24□□□□□ -0.45
SNX11-205ENST00000578861 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNX11-205ENST00000578861 EPS15P42566 896 aa12.23□□□□□ -0.45
SNX11-205ENST00000578861 NOGQ13253 232 aa12.23□□□□□ -0.45
SNX11-205ENST00000578861 AKAP4Q5JQC9 854 aa12.23□□□□□ -0.45
SNX11-205ENST00000578861 GPC2Q8N158 579 aa12.23□□□□□ -0.45
SNX11-205ENST00000578861 PDZRN3Q9UPQ7 1066 aa12.23□□□□□ -0.45
SNX11-205ENST00000578861 THSD7BQ9C0I4 1608 aa12.22□□□□□ -0.45
SNX11-205ENST00000578861 CCDC93Q567U6 631 aa12.22□□□□□ -0.45
SNX11-205ENST00000578861 SYNE4Q8N205 404 aa12.22□□□□□ -0.45
SNX11-205ENST00000578861 BCL2L12Q9HB09 334 aa12.22□□□□□ -0.45
SNX11-205ENST00000578861 FLT4P35916 1363 aa12.21□□□□□ -0.45
SNX11-205ENST00000578861 SOS1Q07889 1333 aaPredicted RBP12.21□□□□□ -0.45
SNX11-205ENST00000578861 FKBP4Q02790 459 aaKnown RBP eCLIP12.21□□□□□ -0.45
SNX11-205ENST00000578861 CDCA8Q53HL2 280 aa12.21□□□□□ -0.45
SNX11-205ENST00000578861 DNAJC10Q8IXB1 793 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms