RNA–Protein interactions for RNA: ENST00000578345.1

TMEM220-203, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM220, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-203ENST00000578345 CNTNAP4Q9C0A0 1308 aa22.7■■□□□ 1.22
TMEM220-203ENST00000578345 HEG1Q9ULI3 1381 aa22.7■■□□□ 1.22
TMEM220-203ENST00000578345 KCNQ3O43525 872 aa22.69■■□□□ 1.22
TMEM220-203ENST00000578345 GPR162Q16538 588 aa22.69■■□□□ 1.22
TMEM220-203ENST00000578345 SNRPA1P09661 255 aaKnown RBP22.68■■□□□ 1.22
TMEM220-203ENST00000578345 SSFA2P28290 1259 aa22.68■■□□□ 1.22
TMEM220-203ENST00000578345 CRKLP46109 303 aaKnown RBP22.68■■□□□ 1.22
TMEM220-203ENST00000578345 NCBP3Q53F19 620 aaKnown RBP22.68■■□□□ 1.22
TMEM220-203ENST00000578345 LAS1LQ9Y4W2 734 aaKnown RBP22.68■■□□□ 1.22
TMEM220-203ENST00000578345 KCPQ6ZWJ8 1503 aa22.67■■□□□ 1.22
TMEM220-203ENST00000578345 RPS6KA4O75676 772 aa22.67■■□□□ 1.22
TMEM220-203ENST00000578345 TRAPPC3LQ5T215 181 aa22.67■■□□□ 1.22
TMEM220-203ENST00000578345 NGEFQ8N5V2 710 aa22.67■■□□□ 1.22
TMEM220-203ENST00000578345 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.66■■□□□ 1.22
TMEM220-203ENST00000578345 PHF14O94880 888 aa22.66■■□□□ 1.22
TMEM220-203ENST00000578345 CYP19A1P11511 503 aaPredicted RBP22.66■■□□□ 1.22
TMEM220-203ENST00000578345 YBX3P16989 372 aaKnown RBP eCLIP22.66■■□□□ 1.22
TMEM220-203ENST00000578345 CCDC27Q2M243 656 aa22.66■■□□□ 1.22
TMEM220-203ENST00000578345 MIER1Q8N108 512 aa22.66■■□□□ 1.22
TMEM220-203ENST00000578345 CCDC87Q9NVE4 849 aa22.66■■□□□ 1.22
TMEM220-203ENST00000578345 UBR2Q8IWV8 1755 aa22.66■■□□□ 1.22
TMEM220-203ENST00000578345 ADRA2BP18089 450 aa22.65■■□□□ 1.22
TMEM220-203ENST00000578345 PELP1Q8IZL8 1130 aaKnown RBP22.65■■□□□ 1.22
TMEM220-203ENST00000578345 NPM2Q86SE8 214 aaKnown RBP22.64■■□□□ 1.21
TMEM220-203ENST00000578345 CFAP44Q96MT7 982 aa22.64■■□□□ 1.21
TMEM220-203ENST00000578345 CHL1O00533 1208 aa22.63■■□□□ 1.21
TMEM220-203ENST00000578345 EIF4A1P60842 406 aaKnown RBP22.63■■□□□ 1.21
TMEM220-203ENST00000578345 GNAI1P63096 354 aa22.63■■□□□ 1.21
TMEM220-203ENST00000578345 CICQ96RK0 1608 aaPredicted RBP22.62■■□□□ 1.21
TMEM220-203ENST00000578345 RFC4P35249 363 aa22.62■■□□□ 1.21
TMEM220-203ENST00000578345 INTS5Q6P9B9 1019 aaKnown RBP22.62■■□□□ 1.21
TMEM220-203ENST00000578345 COL5A3P25940 1745 aaPredicted RBP22.62■■□□□ 1.21
TMEM220-203ENST00000578345 TJP1Q07157 1748 aa22.61■■□□□ 1.21
TMEM220-203ENST00000578345 IFT57Q9NWB7 429 aa22.61■■□□□ 1.21
TMEM220-203ENST00000578345 CANXP27824 592 aaKnown RBP22.6■■□□□ 1.21
TMEM220-203ENST00000578345 WWC1Q8IX03 1113 aa22.6■■□□□ 1.21
TMEM220-203ENST00000578345 SALL2Q9Y467 1007 aaPredicted RBP22.6■■□□□ 1.21
TMEM220-203ENST00000578345 USP16Q9Y5T5 823 aa22.6■■□□□ 1.21
TMEM220-203ENST00000578345 GIGYF1O75420 1035 aaPredicted RBP22.59■■□□□ 1.21
TMEM220-203ENST00000578345 ARHGEF1Q92888 912 aaKnown RBP22.59■■□□□ 1.21
TMEM220-203ENST00000578345 CD2APQ9Y5K6 639 aa22.59■■□□□ 1.21
TMEM220-203ENST00000578345 KDM3BQ7LBC6 1761 aa22.58■■□□□ 1.21
TMEM220-203ENST00000578345 A0A087WZG4 1122 aa22.58■■□□□ 1.21
TMEM220-203ENST00000578345 SENP3-EIF4A1A0A087X0R7 540 aa22.58■■□□□ 1.21
TMEM220-203ENST00000578345 ZBTB1Q9Y2K1 713 aa22.58■■□□□ 1.21
TMEM220-203ENST00000578345 MYH14Q7Z406 1995 aaKnown RBP22.58■■□□□ 1.2
TMEM220-203ENST00000578345 WDR63Q8IWG1 891 aa22.57■■□□□ 1.2
TMEM220-203ENST00000578345 ZPR1O75312 459 aa22.56■■□□□ 1.2
TMEM220-203ENST00000578345 A1BGP04217 495 aa22.56■■□□□ 1.2
TMEM220-203ENST00000578345 IL6STP40189 918 aaPredicted RBP22.56■■□□□ 1.2
TMEM220-203ENST00000578345 SOS1Q07889 1333 aaPredicted RBP22.56■■□□□ 1.2
TMEM220-203ENST00000578345 PRAMEF22A3QJZ6 481 aa22.55■■□□□ 1.2
TMEM220-203ENST00000578345 ZNF853P0CG23 659 aa22.55■■□□□ 1.2
TMEM220-203ENST00000578345 MBIPQ9NS73 344 aa22.55■■□□□ 1.2
TMEM220-203ENST00000578345 ZNF330Q9Y3S2 320 aaPredicted RBP22.55■■□□□ 1.2
TMEM220-203ENST00000578345 IL16Q14005 1332 aa22.55■■□□□ 1.2
TMEM220-203ENST00000578345 NLGN1Q8N2Q7 840 aa22.54■■□□□ 1.2
TMEM220-203ENST00000578345 EIF5P55010 431 aaKnown RBP22.53■■□□□ 1.2
TMEM220-203ENST00000578345 CHMP4AQ9BY43 222 aa22.53■■□□□ 1.2
TMEM220-203ENST00000578345 CEP350Q5VT06 3117 aa22.53■■□□□ 1.2
TMEM220-203ENST00000578345 C4AP0C0L4 1744 aa22.53■■□□□ 1.2
TMEM220-203ENST00000578345 KIAA1551Q9HCM1 1747 aa22.53■■□□□ 1.2
TMEM220-203ENST00000578345 GRIN3BO60391 1043 aa22.52■■□□□ 1.2
TMEM220-203ENST00000578345 KIF13BQ9NQT8 1826 aa22.52■■□□□ 1.2
TMEM220-203ENST00000578345 COL15A1P39059 1388 aa22.51■■□□□ 1.19
TMEM220-203ENST00000578345 HOXB7P09629 217 aa22.51■■□□□ 1.19
TMEM220-203ENST00000578345 EIF2S2P20042 333 aaKnown RBP22.51■■□□□ 1.19
TMEM220-203ENST00000578345 NARFQ9UHQ1 456 aa22.51■■□□□ 1.19
TMEM220-203ENST00000578345 ERBB4Q15303 1308 aa22.5■■□□□ 1.19
TMEM220-203ENST00000578345 WWC3Q9ULE0 1092 aa22.49■■□□□ 1.19
TMEM220-203ENST00000578345 USP42Q9H9J4 1324 aaKnown RBP22.49■■□□□ 1.19
TMEM220-203ENST00000578345 MMP10P09238 476 aa22.48■■□□□ 1.19
TMEM220-203ENST00000578345 GYS1P13807 737 aa22.48■■□□□ 1.19
TMEM220-203ENST00000578345 C1QTNF8P60827 252 aa22.48■■□□□ 1.19
TMEM220-203ENST00000578345 DUSP27Q5VZP5 1158 aa22.48■■□□□ 1.19
TMEM220-203ENST00000578345 USPL1Q5W0Q7 1092 aa22.47■■□□□ 1.19
TMEM220-203ENST00000578345 MYH16Q9H6N6 1097 aa22.47■■□□□ 1.19
TMEM220-203ENST00000578345 SRP68Q9UHB9 627 aaKnown RBP22.47■■□□□ 1.19
TMEM220-203ENST00000578345 PIP4K2AP48426 406 aaPredicted RBP22.46■■□□□ 1.19
TMEM220-203ENST00000578345 GOLGA2Q08379 1002 aa22.46■■□□□ 1.19
TMEM220-203ENST00000578345 DZIP3Q86Y13 1208 aaKnown RBP22.46■■□□□ 1.19
TMEM220-203ENST00000578345 TBC1D2BQ9UPU7 963 aa22.46■■□□□ 1.19
TMEM220-203ENST00000578345 ADCY9O60503 1353 aa22.46■■□□□ 1.19
TMEM220-203ENST00000578345 PXDNLA1KZ92 1463 aa22.46■■□□□ 1.19
TMEM220-203ENST00000578345 LAMB4A4D0S4 1761 aa22.45■■□□□ 1.19
TMEM220-203ENST00000578345 NBPF26B4DH59 902 aa22.45■■□□□ 1.18
TMEM220-203ENST00000578345 MYL6BP14649 208 aa22.45■■□□□ 1.18
TMEM220-203ENST00000578345 KRT24Q2M2I5 525 aa22.45■■□□□ 1.18
TMEM220-203ENST00000578345 HDGFL1Q5TGJ6 251 aa22.45■■□□□ 1.18
TMEM220-203ENST00000578345 NBPF10Q6P3W6 841 aaKnown RBP22.45■■□□□ 1.18
TMEM220-203ENST00000578345 NBPF15Q8N660 670 aa22.45■■□□□ 1.18
TMEM220-203ENST00000578345 TSR2Q969E8 191 aaKnown RBP22.45■■□□□ 1.18
TMEM220-203ENST00000578345 ATP10DQ9P241 1426 aa22.45■■□□□ 1.18
TMEM220-203ENST00000578345 N4BP2Q86UW6 1770 aaPredicted RBP22.45■■□□□ 1.18
TMEM220-203ENST00000578345 C10orf71Q711Q0 1435 aa22.44■■□□□ 1.18
TMEM220-203ENST00000578345 PARP3Q9Y6F1 533 aa22.44■■□□□ 1.18
TMEM220-203ENST00000578345 ELL2O00472 640 aaPredicted RBP22.43■■□□□ 1.18
TMEM220-203ENST00000578345 NECTIN2Q92692 538 aa22.43■■□□□ 1.18
TMEM220-203ENST00000578345 ZNF652Q9Y2D9 606 aa22.43■■□□□ 1.18
TMEM220-203ENST00000578345 FKBP8Q14318 412 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms