RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 NFIXQ14938 502 aa6.09□□□□□ -1.43
PPP4R1-209ENST00000578329 USPL1Q5W0Q7 1092 aa6.09□□□□□ -1.43
PPP4R1-209ENST00000578329 NLGN1Q8N2Q7 840 aa6.09□□□□□ -1.43
PPP4R1-209ENST00000578329 ZNF496Q96IT1 587 aaPredicted RBP6.09□□□□□ -1.43
PPP4R1-209ENST00000578329 RSPH6AQ9H0K4 717 aa6.09□□□□□ -1.43
PPP4R1-209ENST00000578329 CCDC87Q9NVE4 849 aa6.09□□□□□ -1.43
PPP4R1-209ENST00000578329 SCN7AQ01118 1682 aa6.08□□□□□ -1.44
PPP4R1-209ENST00000578329 SENP3-EIF4A1A0A087X0R7 540 aa6.08□□□□□ -1.44
PPP4R1-209ENST00000578329 DCAF8L1A6NGE4 600 aa6.08□□□□□ -1.44
PPP4R1-209ENST00000578329 DIAPH1O60610 1272 aaKnown RBP6.08□□□□□ -1.44
PPP4R1-209ENST00000578329 EIF5P55010 431 aaKnown RBP6.08□□□□□ -1.44
PPP4R1-209ENST00000578329 TGFB2P61812 414 aa6.08□□□□□ -1.44
PPP4R1-209ENST00000578329 SLC51AQ86UW1 340 aa6.08□□□□□ -1.44
PPP4R1-209ENST00000578329 NMRK2Q9NPI5 230 aa6.08□□□□□ -1.44
PPP4R1-209ENST00000578329 COL15A1P39059 1388 aa6.07□□□□□ -1.44
PPP4R1-209ENST00000578329 POTECB2RU33 542 aa6.07□□□□□ -1.44
PPP4R1-209ENST00000578329 GIGYF1O75420 1035 aaPredicted RBP6.07□□□□□ -1.44
PPP4R1-209ENST00000578329 PPP2R1AP30153 589 aa6.07□□□□□ -1.44
PPP4R1-209ENST00000578329 RFC4P35249 363 aa6.07□□□□□ -1.44
PPP4R1-209ENST00000578329 C1orf141Q5JVX7 400 aa6.07□□□□□ -1.44
PPP4R1-209ENST00000578329 DNAJC5GQ8N7S2 189 aa6.07□□□□□ -1.44
PPP4R1-209ENST00000578329 ZNF526Q8TF50 670 aaPredicted RBP6.07□□□□□ -1.44
PPP4R1-209ENST00000578329 NARFQ9UHQ1 456 aa6.07□□□□□ -1.44
PPP4R1-209ENST00000578329 HEG1Q9ULI3 1381 aa6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 BCORQ6W2J9 1755 aa6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 NBPF26B4DH59 902 aa6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 NFKBIEO00221 500 aa6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 A1BGP04217 495 aa6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 PIP4K2AP48426 406 aaPredicted RBP6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 CNGB1Q14028 1251 aaPredicted RBP6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 DCTN1Q14203 1278 aa6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 TBC1D9BQ66K14 1250 aa6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 NBPF10Q6P3W6 841 aaKnown RBP6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 ZNF790Q6PG37 636 aa6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 VSIG10Q8N0Z9 540 aa6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 CCDC24Q8N4L8 307 aa6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 NBPF15Q8N660 670 aa6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 BCS1LQ9Y276 419 aa6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 USP16Q9Y5T5 823 aa6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 SNED1Q8TER0 1413 aa6.06□□□□□ -1.44
PPP4R1-209ENST00000578329 DLG5Q8TDM6 1919 aa6.05□□□□□ -1.44
PPP4R1-209ENST00000578329 SLX4Q8IY92 1834 aa6.05□□□□□ -1.44
PPP4R1-209ENST00000578329 CAMTA2O94983 1202 aa6.05□□□□□ -1.44
PPP4R1-209ENST00000578329 PRKAR2BP31323 418 aa6.05□□□□□ -1.44
PPP4R1-209ENST00000578329 RASSF7Q02833 373 aa6.05□□□□□ -1.44
PPP4R1-209ENST00000578329 PLEKHF1Q96S99 279 aa6.05□□□□□ -1.44
PPP4R1-209ENST00000578329 FER1L6Q2WGJ9 1857 aa6.05□□□□□ -1.44
PPP4R1-209ENST00000578329 KDM3BQ7LBC6 1761 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 FCHSD2O94868 740 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 SERPINB2P05120 415 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 HSPA6P17066 643 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 CANXP27824 592 aaKnown RBP6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 HTRA3P83110 453 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 C9orf131Q5VYM1 1079 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 PRR5LQ6MZQ0 368 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 ARHGAP27Q6ZUM4 889 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 MCM10Q7L590 875 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 LRP10Q7Z4F1 713 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 C7orf43Q8WVR3 580 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 GPBP1L1Q9HC44 474 aaPredicted RBP6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 TBC1D2BQ9UPU7 963 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 PARP3Q9Y6F1 533 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 CCDC88AQ3V6T2 1871 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 COL4A5P29400 1685 aa6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 TNRC6CQ9HCJ0 1690 aaKnown RBP6.04□□□□□ -1.44
PPP4R1-209ENST00000578329 CACNA1SQ13698 1873 aa6.03□□□□□ -1.44
PPP4R1-209ENST00000578329 GNAT3A8MTJ3 354 aa6.03□□□□□ -1.44
PPP4R1-209ENST00000578329 U2SURPO15042 1029 aaKnown RBP6.03□□□□□ -1.44
PPP4R1-209ENST00000578329 THUMPD2Q9BTF0 503 aaKnown RBP6.03□□□□□ -1.44
PPP4R1-209ENST00000578329 MIS18AQ9NYP9 233 aa6.03□□□□□ -1.44
PPP4R1-209ENST00000578329 PIM2Q9P1W9 311 aa6.03□□□□□ -1.44
PPP4R1-209ENST00000578329 TIAM2Q8IVF5 1701 aa6.02□□□□□ -1.45
PPP4R1-209ENST00000578329 COL4A1P02462 1669 aa6.02□□□□□ -1.45
PPP4R1-209ENST00000578329 KLRG2A4D1S0 409 aaPredicted RBP6.02□□□□□ -1.45
PPP4R1-209ENST00000578329 IL6STP40189 918 aaPredicted RBP6.02□□□□□ -1.45
PPP4R1-209ENST00000578329 HLFQ16534 295 aa6.02□□□□□ -1.45
PPP4R1-209ENST00000578329 DALRD3Q5D0E6 543 aaKnown RBP6.02□□□□□ -1.45
PPP4R1-209ENST00000578329 OLFM4Q6UX06 510 aa6.02□□□□□ -1.45
PPP4R1-209ENST00000578329 BICDL1Q6ZP65 573 aa6.02□□□□□ -1.45
PPP4R1-209ENST00000578329 ARFGEF2Q9Y6D5 1785 aa6.02□□□□□ -1.45
PPP4R1-209ENST00000578329 WDR90Q96KV7 1748 aa6.02□□□□□ -1.45
PPP4R1-209ENST00000578329 HMGB2P26583 209 aaKnown RBP6.01□□□□□ -1.45
PPP4R1-209ENST00000578329 C3orf67Q6ZVT6 689 aa6.01□□□□□ -1.45
PPP4R1-209ENST00000578329 C2CD5Q86YS7 1000 aa6.01□□□□□ -1.45
PPP4R1-209ENST00000578329 GAS2L2Q8NHY3 880 aa6.01□□□□□ -1.45
PPP4R1-209ENST00000578329 DICER1Q9UPY3 1922 aaKnown RBP6.01□□□□□ -1.45
PPP4R1-209ENST00000578329 LAMB4A4D0S4 1761 aa6.01□□□□□ -1.45
PPP4R1-209ENST00000578329 PCNTO95613 3336 aa6□□□□□ -1.45
PPP4R1-209ENST00000578329 BTBD11A6QL63 1104 aa6□□□□□ -1.45
PPP4R1-209ENST00000578329 ZPR1O75312 459 aa6□□□□□ -1.45
PPP4R1-209ENST00000578329 TOMM70O94826 608 aa6□□□□□ -1.45
PPP4R1-209ENST00000578329 POTEIP0CG38 1075 aa6□□□□□ -1.45
PPP4R1-209ENST00000578329 POTEJP0CG39 1038 aa6□□□□□ -1.45
PPP4R1-209ENST00000578329 SRGNP10124 158 aa6□□□□□ -1.45
PPP4R1-209ENST00000578329 PDIA6Q15084 440 aa6□□□□□ -1.45
PPP4R1-209ENST00000578329 FMNL2Q96PY5 1086 aa6□□□□□ -1.45
PPP4R1-209ENST00000578329 RRAGCQ9HB90 399 aa6□□□□□ -1.45
PPP4R1-209ENST00000578329 RNF181Q9P0P0 153 aa6□□□□□ -1.45
PPP4R1-209ENST00000578329 ABCC12Q96J65 1359 aa6□□□□□ -1.45
PPP4R1-209ENST00000578329 UBN2Q6ZU65 1347 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms