RNA–Protein interactions for RNA: ENST00000578061.5

LIMD2-202, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LIMD2, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-202ENST00000578061 STARD3NLO95772 234 aa27.39■■□□□ 1.98
LIMD2-202ENST00000578061 YY1P25490 414 aa27.39■■□□□ 1.98
LIMD2-202ENST00000578061 FKBP8Q14318 412 aa27.38■■□□□ 1.97
LIMD2-202ENST00000578061 THUMPD2Q9BTF0 503 aaKnown RBP27.38■■□□□ 1.97
LIMD2-202ENST00000578061 MIS18AQ9NYP9 233 aa27.38■■□□□ 1.97
LIMD2-202ENST00000578061 USPL1Q5W0Q7 1092 aa27.37■■□□□ 1.97
LIMD2-202ENST00000578061 COL15A1P39059 1388 aa27.36■■□□□ 1.97
LIMD2-202ENST00000578061 UTRNP46939 3433 aa27.36■■□□□ 1.97
LIMD2-202ENST00000578061 ZPR1O75312 459 aa27.36■■□□□ 1.97
LIMD2-202ENST00000578061 WWC3Q9ULE0 1092 aa27.36■■□□□ 1.97
LIMD2-202ENST00000578061 PRAMEF22A3QJZ6 481 aa27.35■■□□□ 1.97
LIMD2-202ENST00000578061 TAF7Q15545 349 aaPredicted RBP27.35■■□□□ 1.97
LIMD2-202ENST00000578061 CCDC146Q8IYE0 955 aa27.35■■□□□ 1.97
LIMD2-202ENST00000578061 TEX13AQ9BXU3 409 aaPredicted RBP27.35■■□□□ 1.97
LIMD2-202ENST00000578061 DLG5Q8TDM6 1919 aa27.34■■□□□ 1.97
LIMD2-202ENST00000578061 YBX3P16989 372 aaKnown RBP eCLIP27.34■■□□□ 1.97
LIMD2-202ENST00000578061 ZNF330Q9Y3S2 320 aaPredicted RBP27.34■■□□□ 1.97
LIMD2-202ENST00000578061 PARP3Q9Y6F1 533 aa27.34■■□□□ 1.97
LIMD2-202ENST00000578061 A1BGP04217 495 aa27.33■■□□□ 1.97
LIMD2-202ENST00000578061 WDR43Q15061 677 aaKnown RBP eCLIP27.33■■□□□ 1.97
LIMD2-202ENST00000578061 GOLGB1Q14789 3259 aaKnown RBP27.33■■□□□ 1.97
LIMD2-202ENST00000578061 ZNF316A6NFI3 1004 aaPredicted RBP27.32■■□□□ 1.96
LIMD2-202ENST00000578061 NARFQ9UHQ1 456 aa27.32■■□□□ 1.96
LIMD2-202ENST00000578061 USP16Q9Y5T5 823 aa27.32■■□□□ 1.96
LIMD2-202ENST00000578061 EIF5P55010 431 aaKnown RBP27.31■■□□□ 1.96
LIMD2-202ENST00000578061 RIPK4P57078 832 aa27.31■■□□□ 1.96
LIMD2-202ENST00000578061 DDR1Q08345 913 aa27.31■■□□□ 1.96
LIMD2-202ENST00000578061 RRP7AQ9Y3A4 280 aaKnown RBP27.31■■□□□ 1.96
LIMD2-202ENST00000578061 PIP4K2AP48426 406 aaPredicted RBP27.3■■□□□ 1.96
LIMD2-202ENST00000578061 SNRPA1P09661 255 aaKnown RBP27.29■■□□□ 1.96
LIMD2-202ENST00000578061 ADAMTS8Q9UP79 889 aa27.29■■□□□ 1.96
LIMD2-202ENST00000578061 BCL2L12Q9HB09 334 aa27.28■■□□□ 1.96
LIMD2-202ENST00000578061 TMPOP42166 694 aaKnown RBP27.27■■□□□ 1.96
LIMD2-202ENST00000578061 NEUROD2Q15784 382 aa27.27■■□□□ 1.96
LIMD2-202ENST00000578061 TBC1D2BQ9UPU7 963 aa27.27■■□□□ 1.96
LIMD2-202ENST00000578061 C10orf71Q711Q0 1435 aa27.26■■□□□ 1.95
LIMD2-202ENST00000578061 A0A087WZG4 1122 aa27.26■■□□□ 1.95
LIMD2-202ENST00000578061 TM4SF1P30408 202 aa27.26■■□□□ 1.95
LIMD2-202ENST00000578061 PNISRQ8TF01 805 aaKnown RBP27.26■■□□□ 1.95
LIMD2-202ENST00000578061 A0A0G2JLW4 131 aa27.25■■□□□ 1.95
LIMD2-202ENST00000578061 POLRMTO00411 1230 aaKnown RBP27.25■■□□□ 1.95
LIMD2-202ENST00000578061 IL6STP40189 918 aaPredicted RBP27.25■■□□□ 1.95
LIMD2-202ENST00000578061 NFIXQ14938 502 aa27.25■■□□□ 1.95
LIMD2-202ENST00000578061 RUNDC1Q96C34 613 aa27.24■■□□□ 1.95
LIMD2-202ENST00000578061 PXDNLA1KZ92 1463 aa27.24■■□□□ 1.95
LIMD2-202ENST00000578061 GRIN3BO60391 1043 aa27.23■■□□□ 1.95
LIMD2-202ENST00000578061 BICDL1Q6ZP65 573 aa27.23■■□□□ 1.95
LIMD2-202ENST00000578061 NPM2Q86SE8 214 aaKnown RBP27.22■■□□□ 1.95
LIMD2-202ENST00000578061 DPEP1P16444 411 aa27.21■■□□□ 1.95
LIMD2-202ENST00000578061 EIF4A1P60842 406 aaKnown RBP27.21■■□□□ 1.95
LIMD2-202ENST00000578061 TGFB2P61812 414 aa27.21■■□□□ 1.95
LIMD2-202ENST00000578061 KIF13BQ9NQT8 1826 aa27.2■■□□□ 1.94
LIMD2-202ENST00000578061 KDM3BQ7LBC6 1761 aa27.2■■□□□ 1.94
LIMD2-202ENST00000578061 NBPF26B4DH59 902 aa27.19■■□□□ 1.94
LIMD2-202ENST00000578061 LMOD3Q0VAK6 560 aa27.19■■□□□ 1.94
LIMD2-202ENST00000578061 CCDC184Q52MB2 194 aa27.19■■□□□ 1.94
LIMD2-202ENST00000578061 NBPF10Q6P3W6 841 aaKnown RBP27.19■■□□□ 1.94
LIMD2-202ENST00000578061 NBPF15Q8N660 670 aa27.19■■□□□ 1.94
LIMD2-202ENST00000578061 TSPYL4Q9UJ04 414 aa27.19■■□□□ 1.94
LIMD2-202ENST00000578061 N4BP2Q86UW6 1770 aaPredicted RBP27.19■■□□□ 1.94
LIMD2-202ENST00000578061 KIAA1551Q9HCM1 1747 aa27.19■■□□□ 1.94
LIMD2-202ENST00000578061 GIGYF1O75420 1035 aaPredicted RBP27.18■■□□□ 1.94
LIMD2-202ENST00000578061 TBC1D9BQ66K14 1250 aa27.18■■□□□ 1.94
LIMD2-202ENST00000578061 DZIP3Q86Y13 1208 aaKnown RBP27.18■■□□□ 1.94
LIMD2-202ENST00000578061 CAMTA2O94983 1202 aa27.17■■□□□ 1.94
LIMD2-202ENST00000578061 SERPINB2P05120 415 aa27.17■■□□□ 1.94
LIMD2-202ENST00000578061 TRIM35Q9UPQ4 493 aa27.16■■□□□ 1.94
LIMD2-202ENST00000578061 CHD4Q14839 1912 aa27.16■■□□□ 1.94
LIMD2-202ENST00000578061 BCS1LQ9Y276 419 aa27.15■■□□□ 1.94
LIMD2-202ENST00000578061 SCN7AQ01118 1682 aa27.14■■□□□ 1.94
LIMD2-202ENST00000578061 CHRNA5P30532 468 aa27.14■■□□□ 1.94
LIMD2-202ENST00000578061 KCNA3P22001 575 aa27.13■■□□□ 1.93
LIMD2-202ENST00000578061 NGEFQ8N5V2 710 aa27.13■■□□□ 1.93
LIMD2-202ENST00000578061 LAS1LQ9Y4W2 734 aaKnown RBP27.13■■□□□ 1.93
LIMD2-202ENST00000578061 ZNF784Q8NCA9 323 aaPredicted RBP27.12■■□□□ 1.93
LIMD2-202ENST00000578061 CCDC24Q8N4L8 307 aa27.11■■□□□ 1.93
LIMD2-202ENST00000578061 LAMB4A4D0S4 1761 aa27.11■■□□□ 1.93
LIMD2-202ENST00000578061 AFDNP55196 1824 aaKnown RBP27.11■■□□□ 1.93
LIMD2-202ENST00000578061 APAF1O14727 1248 aa27.1■■□□□ 1.93
LIMD2-202ENST00000578061 ANP32CO43423 234 aa27.1■■□□□ 1.93
LIMD2-202ENST00000578061 CARMIL3Q8ND23 1372 aa27.09■■□□□ 1.93
LIMD2-202ENST00000578061 MYL6BP14649 208 aa27.08■■□□□ 1.93
LIMD2-202ENST00000578061 SETDB2Q96T68 719 aa27.08■■□□□ 1.93
LIMD2-202ENST00000578061 BABAM1Q9NWV8 329 aa27.08■■□□□ 1.93
LIMD2-202ENST00000578061 PIM2Q9P1W9 311 aa27.08■■□□□ 1.93
LIMD2-202ENST00000578061 NRXN2Q9P2S2 1712 aa27.07■■□□□ 1.92
LIMD2-202ENST00000578061 SENP3-EIF4A1A0A087X0R7 540 aa27.07■■□□□ 1.92
LIMD2-202ENST00000578061 EIF2S2P20042 333 aaKnown RBP27.07■■□□□ 1.92
LIMD2-202ENST00000578061 BCORQ6W2J9 1755 aa27.07■■□□□ 1.92
LIMD2-202ENST00000578061 CHL1O00533 1208 aa27.06■■□□□ 1.92
LIMD2-202ENST00000578061 KRT24Q2M2I5 525 aa27.05■■□□□ 1.92
LIMD2-202ENST00000578061 DALRD3Q5D0E6 543 aaKnown RBP27.05■■□□□ 1.92
LIMD2-202ENST00000578061 PRR5LQ6MZQ0 368 aa27.05■■□□□ 1.92
LIMD2-202ENST00000578061 HLFQ16534 295 aa27.04■■□□□ 1.92
LIMD2-202ENST00000578061 ARHGAP27Q6ZUM4 889 aa27.04■■□□□ 1.92
LIMD2-202ENST00000578061 NECTIN2Q92692 538 aa27.04■■□□□ 1.92
LIMD2-202ENST00000578061 MRS2Q9HD23 443 aa27.04■■□□□ 1.92
LIMD2-202ENST00000578061 ZNF652Q9Y2D9 606 aa27.04■■□□□ 1.92
LIMD2-202ENST00000578061 NPHP1O15259 732 aa27.03■■□□□ 1.92
LIMD2-202ENST00000578061 CLEC4GQ6UXB4 293 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms