RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 SOS1Q07889 1333 aaPredicted RBP11.1□□□□□ -0.63
DDX42-204ENST00000577940 RALBP1Q15311 655 aa11.09□□□□□ -0.63
DDX42-204ENST00000577940 ZNF790Q6PG37 636 aa11.09□□□□□ -0.63
DDX42-204ENST00000577940 NPM2Q86SE8 214 aaKnown RBP11.09□□□□□ -0.63
DDX42-204ENST00000577940 NARFQ9UHQ1 456 aa11.09□□□□□ -0.63
DDX42-204ENST00000577940 BCS1LQ9Y276 419 aa11.09□□□□□ -0.63
DDX42-204ENST00000577940 NEFMP07197 916 aa11.09□□□□□ -0.63
DDX42-204ENST00000577940 DPEP1P16444 411 aa11.09□□□□□ -0.63
DDX42-204ENST00000577940 TM4SF1P30408 202 aa11.09□□□□□ -0.63
DDX42-204ENST00000577940 USPL1Q5W0Q7 1092 aa11.09□□□□□ -0.63
DDX42-204ENST00000577940 PHACTR3Q96KR7 559 aa11.09□□□□□ -0.63
DDX42-204ENST00000577940 FMNL2Q96PY5 1086 aa11.09□□□□□ -0.63
DDX42-204ENST00000577940 RSPH6AQ9H0K4 717 aa11.09□□□□□ -0.63
DDX42-204ENST00000577940 GPBP1L1Q9HC44 474 aaPredicted RBP11.09□□□□□ -0.63
DDX42-204ENST00000577940 PIM2Q9P1W9 311 aa11.09□□□□□ -0.63
DDX42-204ENST00000577940 WWC3Q9ULE0 1092 aa11.09□□□□□ -0.63
DDX42-204ENST00000577940 COL24A1Q17RW2 1714 aa11.08□□□□□ -0.64
DDX42-204ENST00000577940 BTBD11A6QL63 1104 aa11.08□□□□□ -0.64
DDX42-204ENST00000577940 HTATSF1O43719 755 aaKnown RBP11.08□□□□□ -0.64
DDX42-204ENST00000577940 CANXP27824 592 aaKnown RBP11.08□□□□□ -0.64
DDX42-204ENST00000577940 POLA2Q14181 598 aa11.08□□□□□ -0.64
DDX42-204ENST00000577940 ZNF496Q96IT1 587 aaPredicted RBP11.08□□□□□ -0.64
DDX42-204ENST00000577940 ITGB4P16144 1822 aa11.08□□□□□ -0.64
DDX42-204ENST00000577940 DALRD3Q5D0E6 543 aaKnown RBP11.07□□□□□ -0.64
DDX42-204ENST00000577940 ARHGAP27Q6ZUM4 889 aa11.07□□□□□ -0.64
DDX42-204ENST00000577940 PNNQ9H307 717 aaKnown RBP11.07□□□□□ -0.64
DDX42-204ENST00000577940 PRKRIP1Q9H875 184 aaPredicted RBP11.07□□□□□ -0.64
DDX42-204ENST00000577940 ZBTB1Q9Y2K1 713 aa11.07□□□□□ -0.64
DDX42-204ENST00000577940 C10orf71Q711Q0 1435 aa11.06□□□□□ -0.64
DDX42-204ENST00000577940 COL3A1P02461 1466 aaPredicted RBP11.06□□□□□ -0.64
DDX42-204ENST00000577940 CCER2I3L3R5 266 aa11.06□□□□□ -0.64
DDX42-204ENST00000577940 POLRMTO00411 1230 aaKnown RBP11.06□□□□□ -0.64
DDX42-204ENST00000577940 DDR1Q08345 913 aa11.06□□□□□ -0.64
DDX42-204ENST00000577940 MRC1P22897 1456 aa11.05□□□□□ -0.64
DDX42-204ENST00000577940 TUBGCP6Q96RT7 1819 aa11.05□□□□□ -0.64
DDX42-204ENST00000577940 CEMIPQ8WUJ3 1361 aa11.05□□□□□ -0.64
DDX42-204ENST00000577940 HEG1Q9ULI3 1381 aa11.05□□□□□ -0.64
DDX42-204ENST00000577940 IL6STP40189 918 aaPredicted RBP11.05□□□□□ -0.64
DDX42-204ENST00000577940 EIF5P55010 431 aaKnown RBP11.05□□□□□ -0.64
DDX42-204ENST00000577940 NFIXQ14938 502 aa11.05□□□□□ -0.64
DDX42-204ENST00000577940 ATP10DQ9P241 1426 aa11.05□□□□□ -0.64
DDX42-204ENST00000577940 ZNF831Q5JPB2 1677 aa11.05□□□□□ -0.64
DDX42-204ENST00000577940 PXDNLA1KZ92 1463 aa11.04□□□□□ -0.64
DDX42-204ENST00000577940 COL15A1P39059 1388 aa11.04□□□□□ -0.64
DDX42-204ENST00000577940 SENP3-EIF4A1A0A087X0R7 540 aa11.04□□□□□ -0.64
DDX42-204ENST00000577940 SERPINB2P05120 415 aa11.04□□□□□ -0.64
DDX42-204ENST00000577940 KCNA3P22001 575 aa11.04□□□□□ -0.64
DDX42-204ENST00000577940 TAF1LQ8IZX4 1826 aa11.04□□□□□ -0.64
DDX42-204ENST00000577940 UBR3Q6ZT12 1888 aa11.04□□□□□ -0.64
DDX42-204ENST00000577940 SNRPA1P09661 255 aaKnown RBP11.03□□□□□ -0.64
DDX42-204ENST00000577940 TAF7Q15545 349 aaPredicted RBP11.03□□□□□ -0.64
DDX42-204ENST00000577940 PDZRN3Q9UPQ7 1066 aa11.03□□□□□ -0.64
DDX42-204ENST00000577940 ZNF330Q9Y3S2 320 aaPredicted RBP11.03□□□□□ -0.64
DDX42-204ENST00000577940 GOLGB1Q14789 3259 aaKnown RBP11.02□□□□□ -0.64
DDX42-204ENST00000577940 MCM10Q7L590 875 aa11.02□□□□□ -0.64
DDX42-204ENST00000577940 ZNF526Q8TF50 670 aaPredicted RBP11.02□□□□□ -0.64
DDX42-204ENST00000577940 BCL2L12Q9HB09 334 aa11.02□□□□□ -0.64
DDX42-204ENST00000577940 CICQ96RK0 1608 aaPredicted RBP11.02□□□□□ -0.65
DDX42-204ENST00000577940 MYBBP1AQ9BQG0 1328 aaKnown RBP11.02□□□□□ -0.65
DDX42-204ENST00000577940 H0YIN7 160 aa11.01□□□□□ -0.65
DDX42-204ENST00000577940 A1BGP04217 495 aa11.01□□□□□ -0.65
DDX42-204ENST00000577940 CHRNA5P30532 468 aa11.01□□□□□ -0.65
DDX42-204ENST00000577940 BICDL1Q6ZP65 573 aa11.01□□□□□ -0.65
DDX42-204ENST00000577940 PNISRQ8TF01 805 aaKnown RBP11.01□□□□□ -0.65
DDX42-204ENST00000577940 SETDB2Q96T68 719 aa11.01□□□□□ -0.65
DDX42-204ENST00000577940 TBC1D2BQ9UPU7 963 aa11.01□□□□□ -0.65
DDX42-204ENST00000577940 KCPQ6ZWJ8 1503 aa11.01□□□□□ -0.65
DDX42-204ENST00000577940 ADCY9O60503 1353 aa11.01□□□□□ -0.65
DDX42-204ENST00000577940 NPHP1O15259 732 aa11.01□□□□□ -0.65
DDX42-204ENST00000577940 KCNQ3O43525 872 aa11.01□□□□□ -0.65
DDX42-204ENST00000577940 PDE6BP35913 854 aa11.01□□□□□ -0.65
DDX42-204ENST00000577940 C9orf131Q5VYM1 1079 aa11.01□□□□□ -0.65
DDX42-204ENST00000577940 TTLL6Q8N841 843 aa11.01□□□□□ -0.65
DDX42-204ENST00000577940 KCNA4P22459 653 aa11□□□□□ -0.65
DDX42-204ENST00000577940 CLEC4GQ6UXB4 293 aa11□□□□□ -0.65
DDX42-204ENST00000577940 C2CD5Q86YS7 1000 aa11□□□□□ -0.65
DDX42-204ENST00000577940 BRIP1Q9BX63 1249 aa11□□□□□ -0.65
DDX42-204ENST00000577940 ZNF652Q9Y2D9 606 aa11□□□□□ -0.65
DDX42-204ENST00000577940 USP16Q9Y5T5 823 aa11□□□□□ -0.65
DDX42-204ENST00000577940 MAPK8IP3Q9UPT6 1336 aa10.99□□□□□ -0.65
DDX42-204ENST00000577940 CAMTA2O94983 1202 aa10.99□□□□□ -0.65
DDX42-204ENST00000577940 DCTN1Q14203 1278 aa10.99□□□□□ -0.65
DDX42-204ENST00000577940 NFE2L2Q16236 605 aa10.99□□□□□ -0.65
DDX42-204ENST00000577940 TBC1D9BQ66K14 1250 aa10.99□□□□□ -0.65
DDX42-204ENST00000577940 DZIP3Q86Y13 1208 aaKnown RBP10.99□□□□□ -0.65
DDX42-204ENST00000577940 MRS2Q9HD23 443 aa10.99□□□□□ -0.65
DDX42-204ENST00000577940 RGL2O15211 777 aa10.98□□□□□ -0.65
DDX42-204ENST00000577940 ST5P78524 1137 aa10.98□□□□□ -0.65
DDX42-204ENST00000577940 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
DDX42-204ENST00000577940 PLEKHF1Q96S99 279 aa10.98□□□□□ -0.65
DDX42-204ENST00000577940 CARMIL3Q8ND23 1372 aa10.98□□□□□ -0.65
DDX42-204ENST00000577940 C4AP0C0L4 1744 aa10.97□□□□□ -0.65
DDX42-204ENST00000577940 CNBD1Q8NA66 436 aa10.97□□□□□ -0.65
DDX42-204ENST00000577940 MIS18AQ9NYP9 233 aa10.97□□□□□ -0.65
DDX42-204ENST00000577940 RNF181Q9P0P0 153 aa10.97□□□□□ -0.65
DDX42-204ENST00000577940 KDM2BQ8NHM5 1336 aa10.97□□□□□ -0.65
DDX42-204ENST00000577940 COL5A3P25940 1745 aaPredicted RBP10.96□□□□□ -0.65
DDX42-204ENST00000577940 KIF3CO14782 793 aa10.96□□□□□ -0.65
DDX42-204ENST00000577940 TOMM70O94826 608 aa10.96□□□□□ -0.65
DDX42-204ENST00000577940 LMNB1P20700 586 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms