RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-212ENST00000577721 TFCP2L1Q9NZI6 479 aa9.73□□□□□ -0.85
SMARCE1-212ENST00000577721 HPS5Q9UPZ3 1129 aa9.73□□□□□ -0.85
SMARCE1-212ENST00000577721 KIAA1210Q9ULL0 1709 aa9.73□□□□□ -0.85
SMARCE1-212ENST00000577721 COL9A1P20849 921 aa9.72□□□□□ -0.85
SMARCE1-212ENST00000577721 SLC16A10Q8TF71 515 aa9.72□□□□□ -0.85
SMARCE1-212ENST00000577721 LRCH3Q96II8 777 aa9.72□□□□□ -0.85
SMARCE1-212ENST00000577721 TNS2Q63HR2 1409 aa9.72□□□□□ -0.85
SMARCE1-212ENST00000577721 KCNQ4P56696 695 aa9.71□□□□□ -0.86
SMARCE1-212ENST00000577721 SLC27A3Q5K4L6 730 aa9.71□□□□□ -0.86
SMARCE1-212ENST00000577721 SLC12A5Q9H2X9 1139 aa9.71□□□□□ -0.86
SMARCE1-212ENST00000577721 TERF2IPQ9NYB0 399 aa9.71□□□□□ -0.86
SMARCE1-212ENST00000577721 PDZRN3Q9UPQ7 1066 aa9.71□□□□□ -0.86
SMARCE1-212ENST00000577721 QRICH2Q9H0J4 1663 aa9.71□□□□□ -0.86
SMARCE1-212ENST00000577721 GIGYF1O75420 1035 aaPredicted RBP9.7□□□□□ -0.86
SMARCE1-212ENST00000577721 PRIM1P49642 420 aaKnown RBP9.7□□□□□ -0.86
SMARCE1-212ENST00000577721 MAP3K9P80192 1104 aa9.7□□□□□ -0.86
SMARCE1-212ENST00000577721 CARD11Q9BXL7 1154 aa9.7□□□□□ -0.86
SMARCE1-212ENST00000577721 SEPT9Q9UHD8 586 aaPredicted RBP9.7□□□□□ -0.86
SMARCE1-212ENST00000577721 PIK3C2AO00443 1686 aa9.7□□□□□ -0.86
SMARCE1-212ENST00000577721 MYOM1P52179 1685 aa9.7□□□□□ -0.86
SMARCE1-212ENST00000577721 COL18A1P39060 1754 aa9.7□□□□□ -0.86
SMARCE1-212ENST00000577721 CASZ1Q86V15 1759 aa9.7□□□□□ -0.86
SMARCE1-212ENST00000577721 RGPD3A6NKT7 1758 aaPredicted RBP9.69□□□□□ -0.86
SMARCE1-212ENST00000577721 AMPHP49418 695 aa9.69□□□□□ -0.86
SMARCE1-212ENST00000577721 USP31Q70CQ4 1352 aa9.69□□□□□ -0.86
SMARCE1-212ENST00000577721 RGPD4Q7Z3J3 1758 aa9.69□□□□□ -0.86
SMARCE1-212ENST00000577721 IP6K1Q92551 441 aa9.69□□□□□ -0.86
SMARCE1-212ENST00000577721 FBXW7Q969H0 707 aa9.69□□□□□ -0.86
SMARCE1-212ENST00000577721 CRISPLD2Q9H0B8 497 aa9.69□□□□□ -0.86
SMARCE1-212ENST00000577721 SBF2Q86WG5 1849 aa9.68□□□□□ -0.86
SMARCE1-212ENST00000577721 TRPM1Q7Z4N2 1603 aa9.67□□□□□ -0.86
SMARCE1-212ENST00000577721 NFAT5O94916 1531 aa9.67□□□□□ -0.86
SMARCE1-212ENST00000577721 MAP3K5Q99683 1374 aa9.67□□□□□ -0.86
SMARCE1-212ENST00000577721 PNPLA7Q6ZV29 1317 aa9.67□□□□□ -0.86
SMARCE1-212ENST00000577721 ZCRB1Q8TBF4 217 aaKnown RBP9.67□□□□□ -0.86
SMARCE1-212ENST00000577721 COG3Q96JB2 828 aa9.67□□□□□ -0.86
SMARCE1-212ENST00000577721 PCDHGA10Q9Y5H3 936 aa9.67□□□□□ -0.86
SMARCE1-212ENST00000577721 SBNO2Q9Y2G9 1366 aa9.66□□□□□ -0.86
SMARCE1-212ENST00000577721 GRIN3BO60391 1043 aa9.66□□□□□ -0.86
SMARCE1-212ENST00000577721 TYW1BQ6NUM6 668 aa9.66□□□□□ -0.86
SMARCE1-212ENST00000577721 NLGN2Q8NFZ4 835 aa9.66□□□□□ -0.86
SMARCE1-212ENST00000577721 CCNL1Q9UK58 526 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-212ENST00000577721 FBLN1P23142 703 aa9.65□□□□□ -0.86
SMARCE1-212ENST00000577721 PDE4AP27815 886 aa9.65□□□□□ -0.86
SMARCE1-212ENST00000577721 PPP4CP60510 307 aa9.65□□□□□ -0.86
SMARCE1-212ENST00000577721 MSL1Q68DK7 614 aa9.65□□□□□ -0.86
SMARCE1-212ENST00000577721 PPP1R18Q6NYC8 613 aa9.65□□□□□ -0.86
SMARCE1-212ENST00000577721 AKAP12Q02952 1782 aa9.65□□□□□ -0.87
SMARCE1-212ENST00000577721 EDC4Q6P2E9 1401 aaKnown RBP9.65□□□□□ -0.87
SMARCE1-212ENST00000577721 HOXC9P31274 260 aa9.64□□□□□ -0.87
SMARCE1-212ENST00000577721 COL23A1Q86Y22 540 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-212ENST00000577721 ABCC6O95255 1503 aa9.64□□□□□ -0.87
SMARCE1-212ENST00000577721 ANKRD36BQ8N2N9 1353 aa9.63□□□□□ -0.87
SMARCE1-212ENST00000577721 USP47Q96K76 1375 aa9.63□□□□□ -0.87
SMARCE1-212ENST00000577721 RGPD5Q99666 1765 aa9.63□□□□□ -0.87
SMARCE1-212ENST00000577721 MAP3K19Q56UN5 1328 aa9.63□□□□□ -0.87
SMARCE1-212ENST00000577721 YBX3P16989 372 aaKnown RBP eCLIP9.63□□□□□ -0.872e-7■■□□□ 12.5
SMARCE1-212ENST00000577721 RAPGEF4Q8WZA2 1011 aa9.63□□□□□ -0.87
SMARCE1-212ENST00000577721 NHSQ6T4R5 1651 aa9.63□□□□□ -0.87
SMARCE1-212ENST00000577721 A0A1W2PP64 1363 aa9.63□□□□□ -0.87
SMARCE1-212ENST00000577721 CD163L1Q9NR16 1453 aa9.62□□□□□ -0.87
SMARCE1-212ENST00000577721 WNK3Q9BYP7 1800 aa9.62□□□□□ -0.87
SMARCE1-212ENST00000577721 PHF14O94880 888 aa9.62□□□□□ -0.87
SMARCE1-212ENST00000577721 TATP17735 454 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-212ENST00000577721 HMGB2P26583 209 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-212ENST00000577721 RRS1Q15050 365 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-212ENST00000577721 TJAP1Q5JTD0 557 aa9.62□□□□□ -0.87
SMARCE1-212ENST00000577721 USHBP1Q8N6Y0 703 aa9.62□□□□□ -0.87
SMARCE1-212ENST00000577721 PUS7Q96PZ0 661 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-212ENST00000577721 TRIM6-TRIM34B2RNG4 842 aa9.61□□□□□ -0.87
SMARCE1-212ENST00000577721 NBPF6Q5VWK0 638 aa9.61□□□□□ -0.87
SMARCE1-212ENST00000577721 FLAD1Q8NFF5 587 aa9.61□□□□□ -0.87
SMARCE1-212ENST00000577721 NBPF4Q96M43 638 aa9.61□□□□□ -0.87
SMARCE1-212ENST00000577721 IL21Q9HBE4 155 aa9.61□□□□□ -0.87
SMARCE1-212ENST00000577721 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-212ENST00000577721 RYDENQ9NUL5 291 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-212ENST00000577721 ST20-MTHFSA0A0A6YYL1 179 aa9.6□□□□□ -0.87
SMARCE1-212ENST00000577721 SLC24A1O60721 1099 aa9.6□□□□□ -0.87
SMARCE1-212ENST00000577721 MPRIPQ6WCQ1 1025 aa9.6□□□□□ -0.87
SMARCE1-212ENST00000577721 ZNF526Q8TF50 670 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-212ENST00000577721 GPBP1L1Q9HC44 474 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-212ENST00000577721 CD2APQ9Y5K6 639 aa9.6□□□□□ -0.87
SMARCE1-212ENST00000577721 CGNL1Q0VF96 1302 aa9.59□□□□□ -0.87
SMARCE1-212ENST00000577721 HS6ST3Q8IZP7 471 aa9.59□□□□□ -0.87
SMARCE1-212ENST00000577721 AK7Q96M32 723 aa9.59□□□□□ -0.87
SMARCE1-212ENST00000577721 GGNBP2Q9H3C7 697 aa9.59□□□□□ -0.87
SMARCE1-212ENST00000577721 WWC3Q9ULE0 1092 aa9.59□□□□□ -0.87
SMARCE1-212ENST00000577721 PAPPAQ13219 1627 aa9.59□□□□□ -0.87
SMARCE1-212ENST00000577721 TONSLQ96HA7 1378 aa9.59□□□□□ -0.87
SMARCE1-212ENST00000577721 BTAF1O14981 1849 aa9.59□□□□□ -0.88
SMARCE1-212ENST00000577721 NSD2O96028 1365 aa9.58□□□□□ -0.88
SMARCE1-212ENST00000577721 SMG6Q86US8 1419 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-212ENST00000577721 FYB1O15117 783 aa9.57□□□□□ -0.88
SMARCE1-212ENST00000577721 C6orf132Q5T0Z8 1188 aa9.57□□□□□ -0.88
SMARCE1-212ENST00000577721 SMARCC1Q92922 1105 aaPredicted RBP9.57□□□□□ -0.88
SMARCE1-212ENST00000577721 MTRQ99707 1265 aa9.57□□□□□ -0.88
SMARCE1-212ENST00000577721 PCDH11XQ9BZA7 1347 aa9.56□□□□□ -0.88
SMARCE1-212ENST00000577721 PCDH11YQ9BZA8 1340 aa9.56□□□□□ -0.88
SMARCE1-212ENST00000577721 ATP10DQ9P241 1426 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms