RNA–Protein interactions for RNA: ENST00000577681.1

CCL13-202, Transcript of C-C motif chemokine ligand 13, humanhuman

TSL 1 (best)

Gene CCL13, Length 669 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-202ENST00000577681 NEUROD2Q15784 382 aa10.44□□□□□ -0.74
CCL13-202ENST00000577681 SLC27A3Q5K4L6 730 aa10.44□□□□□ -0.74
CCL13-202ENST00000577681 ZNF790Q6PG37 636 aa10.44□□□□□ -0.74
CCL13-202ENST00000577681 TRMT2AQ8IZ69 625 aaKnown RBP10.44□□□□□ -0.74
CCL13-202ENST00000577681 BTBD11A6QL63 1104 aa10.43□□□□□ -0.74
CCL13-202ENST00000577681 THUMPD2Q9BTF0 503 aaKnown RBP10.43□□□□□ -0.74
CCL13-202ENST00000577681 ASAP1Q9ULH1 1129 aa10.43□□□□□ -0.74
CCL13-202ENST00000577681 COL5A3P25940 1745 aaPredicted RBP10.43□□□□□ -0.74
CCL13-202ENST00000577681 CACNA1FO60840 1977 aa10.43□□□□□ -0.74
CCL13-202ENST00000577681 PALLDQ8WX93 1383 aa10.42□□□□□ -0.74
CCL13-202ENST00000577681 C5P01031 1676 aa10.42□□□□□ -0.74
CCL13-202ENST00000577681 HOXB7P09629 217 aa10.42□□□□□ -0.74
CCL13-202ENST00000577681 SYTL4Q96C24 671 aaPredicted RBP10.42□□□□□ -0.74
CCL13-202ENST00000577681 ANO8Q9HCE9 1232 aaPredicted RBP10.42□□□□□ -0.74
CCL13-202ENST00000577681 TJP1Q07157 1748 aa10.41□□□□□ -0.74
CCL13-202ENST00000577681 NUP188Q5SRE5 1749 aa10.41□□□□□ -0.74
CCL13-202ENST00000577681 LOC102724428A0A0B4J2F2 783 aa10.41□□□□□ -0.74
CCL13-202ENST00000577681 E9PSI1 815 aa10.41□□□□□ -0.74
CCL13-202ENST00000577681 SIK1P57059 783 aa10.41□□□□□ -0.74
CCL13-202ENST00000577681 C1QTNF8P60827 252 aa10.41□□□□□ -0.74
CCL13-202ENST00000577681 EIF4A1P60842 406 aaKnown RBP10.41□□□□□ -0.74
CCL13-202ENST00000577681 GOLGA2Q08379 1002 aa10.41□□□□□ -0.74
CCL13-202ENST00000577681 SLFN5Q08AF3 891 aa10.41□□□□□ -0.74
CCL13-202ENST00000577681 POTEHQ6S545 545 aa10.41□□□□□ -0.74
CCL13-202ENST00000577681 FMNL2Q96PY5 1086 aa10.41□□□□□ -0.74
CCL13-202ENST00000577681 TEX13AQ9BXU3 409 aaPredicted RBP10.41□□□□□ -0.74
CCL13-202ENST00000577681 CREBZFQ9NS37 354 aa10.41□□□□□ -0.74
CCL13-202ENST00000577681 LAMB4A4D0S4 1761 aa10.41□□□□□ -0.74
CCL13-202ENST00000577681 QSER1Q2KHR3 1735 aa10.41□□□□□ -0.74
CCL13-202ENST00000577681 PRKAR2AP13861 404 aaKnown RBP10.4□□□□□ -0.74
CCL13-202ENST00000577681 HNRNPUQ00839 825 aaKnown RBP eCLIP10.4□□□□□ -0.74
CCL13-202ENST00000577681 TXNRD1Q16881 649 aa10.4□□□□□ -0.74
CCL13-202ENST00000577681 IFFO2Q5TF58 517 aa10.4□□□□□ -0.74
CCL13-202ENST00000577681 TTC5Q8N0Z6 440 aa10.4□□□□□ -0.74
CCL13-202ENST00000577681 ZNF496Q96IT1 587 aaPredicted RBP10.4□□□□□ -0.74
CCL13-202ENST00000577681 SLC4A9Q96Q91 983 aa10.4□□□□□ -0.74
CCL13-202ENST00000577681 PDGFDQ9GZP0 370 aaPredicted RBP10.4□□□□□ -0.74
CCL13-202ENST00000577681 MYH16Q9H6N6 1097 aa10.4□□□□□ -0.74
CCL13-202ENST00000577681 MBIPQ9NS73 344 aa10.4□□□□□ -0.74
CCL13-202ENST00000577681 TSPYL4Q9UJ04 414 aa10.4□□□□□ -0.74
CCL13-202ENST00000577681 MYH14Q7Z406 1995 aaKnown RBP10.39□□□□□ -0.75
CCL13-202ENST00000577681 KCNQ3O43525 872 aa10.39□□□□□ -0.75
CCL13-202ENST00000577681 GIGYF1O75420 1035 aaPredicted RBP10.39□□□□□ -0.75
CCL13-202ENST00000577681 SLC39A6Q13433 755 aa10.39□□□□□ -0.75
CCL13-202ENST00000577681 RC3H1Q5TC82 1133 aaKnown RBP10.39□□□□□ -0.75
CCL13-202ENST00000577681 CHMP4AQ9BY43 222 aa10.39□□□□□ -0.75
CCL13-202ENST00000577681 FHDC1Q9C0D6 1143 aaPredicted RBP10.39□□□□□ -0.75
CCL13-202ENST00000577681 STK32BQ9NY57 414 aa10.39□□□□□ -0.75
CCL13-202ENST00000577681 SNRPA1P09661 255 aaKnown RBP10.38□□□□□ -0.75
CCL13-202ENST00000577681 PTGER2P43116 358 aa10.38□□□□□ -0.75
CCL13-202ENST00000577681 LRRC4BQ9NT99 713 aa10.38□□□□□ -0.75
CCL13-202ENST00000577681 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
CCL13-202ENST00000577681 CNTNAP4Q9C0A0 1308 aa10.37□□□□□ -0.75
CCL13-202ENST00000577681 FANCIQ9NVI1 1328 aa10.37□□□□□ -0.75
CCL13-202ENST00000577681 C4BP0C0L5 1744 aa10.37□□□□□ -0.75
CCL13-202ENST00000577681 CT47B1P0C2W7 299 aaPredicted RBP10.37□□□□□ -0.75
CCL13-202ENST00000577681 DUSP27Q5VZP5 1158 aa10.37□□□□□ -0.75
CCL13-202ENST00000577681 UBR3Q6ZT12 1888 aa10.37□□□□□ -0.75
CCL13-202ENST00000577681 ZNF428Q96B54 188 aa10.37□□□□□ -0.75
CCL13-202ENST00000577681 SYT17Q9BSW7 474 aa10.37□□□□□ -0.75
CCL13-202ENST00000577681 MIS18AQ9NYP9 233 aa10.37□□□□□ -0.75
CCL13-202ENST00000577681 CCNL1Q9UK58 526 aaPredicted RBP10.37□□□□□ -0.75
CCL13-202ENST00000577681 PTCD1O75127 700 aaKnown RBP10.36□□□□□ -0.75
CCL13-202ENST00000577681 CYP19A1P11511 503 aaPredicted RBP10.36□□□□□ -0.75
CCL13-202ENST00000577681 ATP6V1AP38606 617 aa10.36□□□□□ -0.75
CCL13-202ENST00000577681 ITPK1Q13572 414 aa10.36□□□□□ -0.75
CCL13-202ENST00000577681 SALL2Q9Y467 1007 aaPredicted RBP10.36□□□□□ -0.75
CCL13-202ENST00000577681 CEP350Q5VT06 3117 aa10.35□□□□□ -0.75
CCL13-202ENST00000577681 STARD3NLO95772 234 aa10.35□□□□□ -0.75
CCL13-202ENST00000577681 DNAJC10Q8IXB1 793 aa10.35□□□□□ -0.75
CCL13-202ENST00000577681 MTFR1LQ9H019 292 aa10.35□□□□□ -0.75
CCL13-202ENST00000577681 RGL2O15211 777 aa10.34□□□□□ -0.75
CCL13-202ENST00000577681 VAMP4O75379 141 aa10.34□□□□□ -0.75
CCL13-202ENST00000577681 SLC15A2Q16348 729 aa10.34□□□□□ -0.75
CCL13-202ENST00000577681 GPR162Q16538 588 aa10.34□□□□□ -0.75
CCL13-202ENST00000577681 INTS5Q6P9B9 1019 aaKnown RBP10.34□□□□□ -0.75
CCL13-202ENST00000577681 C8orf58Q8NAV2 365 aa10.34□□□□□ -0.75
CCL13-202ENST00000577681 LINC00116Q8NCU8 138 aa10.34□□□□□ -0.75
CCL13-202ENST00000577681 TSR2Q969E8 191 aaKnown RBP10.34□□□□□ -0.75
CCL13-202ENST00000577681 CDCA7LQ96GN5 454 aa10.34□□□□□ -0.75
CCL13-202ENST00000577681 LAS1LQ9Y4W2 734 aaKnown RBP10.34□□□□□ -0.75
CCL13-202ENST00000577681 USP16Q9Y5T5 823 aa10.34□□□□□ -0.75
CCL13-202ENST00000577681 TUBGCP6Q96RT7 1819 aa10.34□□□□□ -0.75
CCL13-202ENST00000577681 RPS6KA4O75676 772 aa10.33□□□□□ -0.76
CCL13-202ENST00000577681 PELP1Q8IZL8 1130 aaKnown RBP10.33□□□□□ -0.76
CCL13-202ENST00000577681 KLHL34Q8N239 644 aa10.33□□□□□ -0.76
CCL13-202ENST00000577681 ARXQ96QS3 562 aa10.33□□□□□ -0.76
CCL13-202ENST00000577681 FBXO3Q9UK99 471 aa10.33□□□□□ -0.76
CCL13-202ENST00000577681 COL24A1Q17RW2 1714 aa10.33□□□□□ -0.76
CCL13-202ENST00000577681 IL6STP40189 918 aaPredicted RBP10.32□□□□□ -0.76
CCL13-202ENST00000577681 CRKLP46109 303 aaKnown RBP10.32□□□□□ -0.76
CCL13-202ENST00000577681 MNX1P50219 401 aaPredicted RBP10.32□□□□□ -0.76
CCL13-202ENST00000577681 EIF5P55010 431 aaKnown RBP10.32□□□□□ -0.76
CCL13-202ENST00000577681 BRPF1P55201 1214 aaPredicted RBP10.32□□□□□ -0.76
CCL13-202ENST00000577681 EXOSC9Q06265 439 aaKnown RBP10.32□□□□□ -0.76
CCL13-202ENST00000577681 PDIA6Q15084 440 aa10.32□□□□□ -0.76
CCL13-202ENST00000577681 TWISTNBQ3B726 338 aaPredicted RBP10.32□□□□□ -0.76
CCL13-202ENST00000577681 LRP10Q7Z4F1 713 aa10.32□□□□□ -0.76
CCL13-202ENST00000577681 TSPYL6Q8N831 410 aa10.32□□□□□ -0.76
CCL13-202ENST00000577681 FLAD1Q8NFF5 587 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms