RNA–Protein interactions for RNA: ENST00000577561.1

NUP85-205, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-205ENST00000577561 KLHL34Q8N239 644 aa25.68■■□□□ 1.7
NUP85-205ENST00000577561 THUMPD2Q9BTF0 503 aaKnown RBP25.68■■□□□ 1.7
NUP85-205ENST00000577561 ANP32CO43423 234 aa25.67■■□□□ 1.7
NUP85-205ENST00000577561 PNISRQ8TF01 805 aaKnown RBP25.67■■□□□ 1.7
NUP85-205ENST00000577561 C4AP0C0L4 1744 aa25.66■■□□□ 1.7
NUP85-205ENST00000577561 LMOD3Q0VAK6 560 aa25.66■■□□□ 1.7
NUP85-205ENST00000577561 MIS18AQ9NYP9 233 aa25.66■■□□□ 1.7
NUP85-205ENST00000577561 USP42Q9H9J4 1324 aaKnown RBP25.65■■□□□ 1.7
NUP85-205ENST00000577561 DCAF8L1A6NGE4 600 aa25.65■■□□□ 1.7
NUP85-205ENST00000577561 CANXP27824 592 aaKnown RBP25.65■■□□□ 1.7
NUP85-205ENST00000577561 SRP68Q9UHB9 627 aaKnown RBP25.65■■□□□ 1.7
NUP85-205ENST00000577561 MMP10P09238 476 aa25.64■■□□□ 1.7
NUP85-205ENST00000577561 SNRPA1P09661 255 aaKnown RBP25.64■■□□□ 1.7
NUP85-205ENST00000577561 RRP7AQ9Y3A4 280 aaKnown RBP25.64■■□□□ 1.7
NUP85-205ENST00000577561 CCDC184Q52MB2 194 aa25.63■■□□□ 1.69
NUP85-205ENST00000577561 CD2APQ9Y5K6 639 aa25.63■■□□□ 1.69
NUP85-205ENST00000577561 COL15A1P39059 1388 aa25.63■■□□□ 1.69
NUP85-205ENST00000577561 ZPR1O75312 459 aa25.62■■□□□ 1.69
NUP85-205ENST00000577561 EIF5P55010 431 aaKnown RBP25.62■■□□□ 1.69
NUP85-205ENST00000577561 NEUROD2Q15784 382 aa25.62■■□□□ 1.69
NUP85-205ENST00000577561 USP16Q9Y5T5 823 aa25.62■■□□□ 1.69
NUP85-205ENST00000577561 PRAMEF22A3QJZ6 481 aa25.61■■□□□ 1.69
NUP85-205ENST00000577561 NLGN2Q8NFZ4 835 aa25.61■■□□□ 1.69
NUP85-205ENST00000577561 NARFQ9UHQ1 456 aa25.61■■□□□ 1.69
NUP85-205ENST00000577561 A1BGP04217 495 aa25.6■■□□□ 1.69
NUP85-205ENST00000577561 FKBP8Q14318 412 aa25.6■■□□□ 1.69
NUP85-205ENST00000577561 UTRNP46939 3433 aa25.6■■□□□ 1.69
NUP85-205ENST00000577561 GOLGB1Q14789 3259 aaKnown RBP25.59■■□□□ 1.69
NUP85-205ENST00000577561 IL6STP40189 918 aaPredicted RBP25.59■■□□□ 1.69
NUP85-205ENST00000577561 USPL1Q5W0Q7 1092 aa25.59■■□□□ 1.69
NUP85-205ENST00000577561 KDM3BQ7LBC6 1761 aa25.59■■□□□ 1.69
NUP85-205ENST00000577561 A0A087WZG4 1122 aa25.58■■□□□ 1.69
NUP85-205ENST00000577561 EIF4A1P60842 406 aaKnown RBP25.58■■□□□ 1.69
NUP85-205ENST00000577561 TRIM35Q9UPQ4 493 aa25.58■■□□□ 1.69
NUP85-205ENST00000577561 BABAM1Q9NWV8 329 aa25.57■■□□□ 1.68
NUP85-205ENST00000577561 PARP3Q9Y6F1 533 aa25.57■■□□□ 1.68
NUP85-205ENST00000577561 TSPYL4Q9UJ04 414 aa25.56■■□□□ 1.68
NUP85-205ENST00000577561 GIGYF1O75420 1035 aaPredicted RBP25.55■■□□□ 1.68
NUP85-205ENST00000577561 MRS2Q9HD23 443 aa25.55■■□□□ 1.68
NUP85-205ENST00000577561 APAF1O14727 1248 aa25.54■■□□□ 1.68
NUP85-205ENST00000577561 TM4SF1P30408 202 aa25.54■■□□□ 1.68
NUP85-205ENST00000577561 BCL2L12Q9HB09 334 aa25.54■■□□□ 1.68
NUP85-205ENST00000577561 ZNF330Q9Y3S2 320 aaPredicted RBP25.54■■□□□ 1.68
NUP85-205ENST00000577561 NPM2Q86SE8 214 aaKnown RBP25.53■■□□□ 1.68
NUP85-205ENST00000577561 DDR1Q08345 913 aa25.52■■□□□ 1.68
NUP85-205ENST00000577561 GPR162Q16538 588 aa25.52■■□□□ 1.68
NUP85-205ENST00000577561 PIP4K2AP48426 406 aaPredicted RBP25.51■■□□□ 1.67
NUP85-205ENST00000577561 TBC1D2BQ9UPU7 963 aa25.51■■□□□ 1.67
NUP85-205ENST00000577561 NBPF26B4DH59 902 aa25.5■■□□□ 1.67
NUP85-205ENST00000577561 POLRMTO00411 1230 aaKnown RBP25.5■■□□□ 1.67
NUP85-205ENST00000577561 CHL1O00533 1208 aa25.5■■□□□ 1.67
NUP85-205ENST00000577561 NBPF10Q6P3W6 841 aaKnown RBP25.5■■□□□ 1.67
NUP85-205ENST00000577561 NBPF15Q8N660 670 aa25.5■■□□□ 1.67
NUP85-205ENST00000577561 C10orf71Q711Q0 1435 aa25.49■■□□□ 1.67
NUP85-205ENST00000577561 NFIXQ14938 502 aa25.49■■□□□ 1.67
NUP85-205ENST00000577561 PELP1Q8IZL8 1130 aaKnown RBP25.48■■□□□ 1.67
NUP85-205ENST00000577561 LAMB4A4D0S4 1761 aa25.48■■□□□ 1.67
NUP85-205ENST00000577561 KIF13BQ9NQT8 1826 aa25.47■■□□□ 1.67
NUP85-205ENST00000577561 CAMTA2O94983 1202 aa25.47■■□□□ 1.67
NUP85-205ENST00000577561 DZIP3Q86Y13 1208 aaKnown RBP25.47■■□□□ 1.67
NUP85-205ENST00000577561 TGFB2P61812 414 aa25.46■■□□□ 1.67
NUP85-205ENST00000577561 LAS1LQ9Y4W2 734 aaKnown RBP25.46■■□□□ 1.67
NUP85-205ENST00000577561 SCN7AQ01118 1682 aa25.45■■□□□ 1.66
NUP85-205ENST00000577561 YBX3P16989 372 aaKnown RBP eCLIP25.44■■□□□ 1.66
NUP85-205ENST00000577561 TBC1D9BQ66K14 1250 aa25.44■■□□□ 1.66
NUP85-205ENST00000577561 CFAP44Q96MT7 982 aa25.44■■□□□ 1.66
NUP85-205ENST00000577561 PXDNLA1KZ92 1463 aa25.43■■□□□ 1.66
NUP85-205ENST00000577561 SERPINB2P05120 415 aa25.42■■□□□ 1.66
NUP85-205ENST00000577561 CALD1Q05682 793 aaKnown RBP25.42■■□□□ 1.66
NUP85-205ENST00000577561 BICDL1Q6ZP65 573 aa25.42■■□□□ 1.66
NUP85-205ENST00000577561 ERBB4Q15303 1308 aa25.41■■□□□ 1.66
NUP85-205ENST00000577561 GRIN3BO60391 1043 aa25.41■■□□□ 1.66
NUP85-205ENST00000577561 CLEC4GQ6UXB4 293 aa25.41■■□□□ 1.66
NUP85-205ENST00000577561 A0A0G2JLW4 131 aa25.4■■□□□ 1.66
NUP85-205ENST00000577561 RGL2O15211 777 aa25.4■■□□□ 1.66
NUP85-205ENST00000577561 ZNF853P0CG23 659 aa25.4■■□□□ 1.66
NUP85-205ENST00000577561 KIAA1551Q9HCM1 1747 aa25.4■■□□□ 1.66
NUP85-205ENST00000577561 BCORQ6W2J9 1755 aa25.39■■□□□ 1.66
NUP85-205ENST00000577561 DPEP1P16444 411 aa25.39■■□□□ 1.66
NUP85-205ENST00000577561 YY1P25490 414 aa25.39■■□□□ 1.66
NUP85-205ENST00000577561 IFT57Q9NWB7 429 aa25.39■■□□□ 1.66
NUP85-205ENST00000577561 ZNF652Q9Y2D9 606 aa25.39■■□□□ 1.66
NUP85-205ENST00000577561 NRXN2Q9P2S2 1712 aa25.39■■□□□ 1.65
NUP85-205ENST00000577561 AFDNP55196 1824 aaKnown RBP25.39■■□□□ 1.65
NUP85-205ENST00000577561 MYL6BP14649 208 aa25.38■■□□□ 1.65
NUP85-205ENST00000577561 EIF2S2P20042 333 aaKnown RBP25.38■■□□□ 1.65
NUP85-205ENST00000577561 GNAI1P63096 354 aa25.38■■□□□ 1.65
NUP85-205ENST00000577561 CCDC27Q2M243 656 aa25.38■■□□□ 1.65
NUP85-205ENST00000577561 KRT24Q2M2I5 525 aa25.38■■□□□ 1.65
NUP85-205ENST00000577561 SETDB2Q96T68 719 aa25.38■■□□□ 1.65
NUP85-205ENST00000577561 MBIPQ9NS73 344 aa25.38■■□□□ 1.65
NUP85-205ENST00000577561 CARMIL3Q8ND23 1372 aa25.38■■□□□ 1.65
NUP85-205ENST00000577561 N4BP2Q86UW6 1770 aaPredicted RBP25.37■■□□□ 1.65
NUP85-205ENST00000577561 NCBP3Q53F19 620 aaKnown RBP25.37■■□□□ 1.65
NUP85-205ENST00000577561 NGEFQ8N5V2 710 aa25.37■■□□□ 1.65
NUP85-205ENST00000577561 WWC3Q9ULE0 1092 aa25.37■■□□□ 1.65
NUP85-205ENST00000577561 KCNA3P22001 575 aa25.36■■□□□ 1.65
NUP85-205ENST00000577561 PDIA6Q15084 440 aa25.36■■□□□ 1.65
NUP85-205ENST00000577561 HOXB7P09629 217 aa25.35■■□□□ 1.65
NUP85-205ENST00000577561 SENP3-EIF4A1A0A087X0R7 540 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms