RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 GZF1Q9H116 711 aaPredicted RBP17.28■□□□□ 0.36
RAB40B-211ENST00000576359 CRYBG1Q9Y4K1 1723 aa17.28■□□□□ 0.36
RAB40B-211ENST00000576359 ATF3P18847 181 aa17.27■□□□□ 0.36
RAB40B-211ENST00000576359 PPP1R42Q7Z4L9 355 aa17.27■□□□□ 0.36
RAB40B-211ENST00000576359 COL18A1P39060 1754 aa17.27■□□□□ 0.36
RAB40B-211ENST00000576359 DBF4Q9UBU7 674 aaPredicted RBP17.27■□□□□ 0.36
RAB40B-211ENST00000576359 STAP2Q9UGK3 403 aa17.26■□□□□ 0.35
RAB40B-211ENST00000576359 DCCP43146 1447 aa17.26■□□□□ 0.35
RAB40B-211ENST00000576359 ERC2O15083 957 aa17.26■□□□□ 0.35
RAB40B-211ENST00000576359 L1TD1Q5T7N2 865 aaKnown RBP17.26■□□□□ 0.35
RAB40B-211ENST00000576359 CHMP4AQ9BY43 222 aa17.25■□□□□ 0.35
RAB40B-211ENST00000576359 IL1RAPL2Q9NP60 686 aa17.25■□□□□ 0.35
RAB40B-211ENST00000576359 KDM6AO15550 1401 aaPredicted RBP17.25■□□□□ 0.35
RAB40B-211ENST00000576359 REC8O95072 547 aa17.24■□□□□ 0.35
RAB40B-211ENST00000576359 MEGF6O75095 1541 aa17.24■□□□□ 0.35
RAB40B-211ENST00000576359 SCN11AQ9UI33 1791 aa17.24■□□□□ 0.35
RAB40B-211ENST00000576359 UNC5CLQ8IV45 518 aa17.24■□□□□ 0.35
RAB40B-211ENST00000576359 CABLES1Q8TDN4 633 aa17.24■□□□□ 0.35
RAB40B-211ENST00000576359 GBP4Q96PP9 640 aa17.24■□□□□ 0.35
RAB40B-211ENST00000576359 SRGAP3O43295 1099 aa17.23■□□□□ 0.35
RAB40B-211ENST00000576359 SURF6O75683 361 aaKnown RBP17.23■□□□□ 0.35
RAB40B-211ENST00000576359 NLRP2Q9NX02 1062 aa17.23■□□□□ 0.35
RAB40B-211ENST00000576359 MAP3K2Q9Y2U5 619 aa17.23■□□□□ 0.35
RAB40B-211ENST00000576359 GOLGA6L3A6NEY3 463 aa17.22■□□□□ 0.35
RAB40B-211ENST00000576359 ARXQ96QS3 562 aa17.22■□□□□ 0.35
RAB40B-211ENST00000576359 ESYT1Q9BSJ8 1104 aa17.22■□□□□ 0.35
RAB40B-211ENST00000576359 C5P01031 1676 aa17.22■□□□□ 0.35
RAB40B-211ENST00000576359 FSD2A1L4K1 749 aa17.22■□□□□ 0.35
RAB40B-211ENST00000576359 RAB11FIP3O75154 756 aa17.22■□□□□ 0.35
RAB40B-211ENST00000576359 NUTM1Q86Y26 1132 aa17.22■□□□□ 0.35
RAB40B-211ENST00000576359 RAPGEF4Q8WZA2 1011 aa17.22■□□□□ 0.35
RAB40B-211ENST00000576359 AK9Q5TCS8 1911 aa17.22■□□□□ 0.35
RAB40B-211ENST00000576359 AOX1Q06278 1338 aa17.22■□□□□ 0.35
RAB40B-211ENST00000576359 CHMLP26374 656 aa17.21■□□□□ 0.35
RAB40B-211ENST00000576359 RHPN1Q8TCX5 695 aa17.21■□□□□ 0.35
RAB40B-211ENST00000576359 RILPL2Q969X0 211 aa17.21■□□□□ 0.35
RAB40B-211ENST00000576359 TNS3Q68CZ2 1445 aa17.21■□□□□ 0.35
RAB40B-211ENST00000576359 NPHP3Q7Z494 1330 aa17.21■□□□□ 0.35
RAB40B-211ENST00000576359 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
RAB40B-211ENST00000576359 SLC39A6Q13433 755 aa17.21■□□□□ 0.35
RAB40B-211ENST00000576359 KSR2Q6VAB6 950 aa17.21■□□□□ 0.35
RAB40B-211ENST00000576359 PDIA6Q15084 440 aa17.2■□□□□ 0.34
RAB40B-211ENST00000576359 CHRNA2Q15822 529 aa17.2■□□□□ 0.34
RAB40B-211ENST00000576359 PHKG2P15735 406 aa17.2■□□□□ 0.34
RAB40B-211ENST00000576359 SSFA2P28290 1259 aa17.2■□□□□ 0.34
RAB40B-211ENST00000576359 CWF19L2Q2TBE0 894 aaKnown RBP17.2■□□□□ 0.34
RAB40B-211ENST00000576359 SLC52A2Q9HAB3 445 aa17.2■□□□□ 0.34
RAB40B-211ENST00000576359 ZNF790Q6PG37 636 aa17.19■□□□□ 0.34
RAB40B-211ENST00000576359 ABCC6O95255 1503 aa17.19■□□□□ 0.34
RAB40B-211ENST00000576359 ALDH1L1O75891 902 aa17.19■□□□□ 0.34
RAB40B-211ENST00000576359 TATP17735 454 aaPredicted RBP17.19■□□□□ 0.34
RAB40B-211ENST00000576359 PI4K2BQ8TCG2 481 aa17.19■□□□□ 0.34
RAB40B-211ENST00000576359 XIRP1Q702N8 1843 aaKnown RBP17.18■□□□□ 0.34
RAB40B-211ENST00000576359 ST18O60284 1047 aa17.18■□□□□ 0.34
RAB40B-211ENST00000576359 XRCC6P12956 609 aaKnown RBP eCLIP17.18■□□□□ 0.34
RAB40B-211ENST00000576359 HSPA2P54652 639 aa17.18■□□□□ 0.34
RAB40B-211ENST00000576359 MTX1Q13505 466 aa17.18■□□□□ 0.34
RAB40B-211ENST00000576359 CADPS2Q86UW7 1296 aa17.18■□□□□ 0.34
RAB40B-211ENST00000576359 KIF1BPQ96EK5 621 aa17.18■□□□□ 0.34
RAB40B-211ENST00000576359 IL25Q9H293 177 aa17.18■□□□□ 0.34
RAB40B-211ENST00000576359 DDX21Q9NR30 783 aaKnown RBP eCLIP17.18■□□□□ 0.34
RAB40B-211ENST00000576359 HYPKQ9NX55 129 aa17.18■□□□□ 0.34
RAB40B-211ENST00000576359 NFATC2IPQ8NCF5 419 aa17.17■□□□□ 0.34
RAB40B-211ENST00000576359 SPATA31A3Q5VYP0 1347 aa17.17■□□□□ 0.34
RAB40B-211ENST00000576359 SPG7Q9UQ90 795 aa17.17■□□□□ 0.34
RAB40B-211ENST00000576359 CSB-PGBD3P0DP91 1061 aa17.16■□□□□ 0.34
RAB40B-211ENST00000576359 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.16■□□□□ 0.34
RAB40B-211ENST00000576359 C9orf78Q9NZ63 289 aaPredicted RBP17.16■□□□□ 0.34
RAB40B-211ENST00000576359 PALD1Q9ULE6 856 aa17.16■□□□□ 0.34
RAB40B-211ENST00000576359 PKD1L3Q7Z443 1732 aa17.16■□□□□ 0.34
RAB40B-211ENST00000576359 MAP4K4O95819 1239 aaPredicted RBP17.16■□□□□ 0.34
RAB40B-211ENST00000576359 AIMP1Q12904 312 aaKnown RBP17.16■□□□□ 0.34
RAB40B-211ENST00000576359 MRC1P22897 1456 aa17.16■□□□□ 0.34
RAB40B-211ENST00000576359 CYP27B1O15528 508 aa17.15■□□□□ 0.34
RAB40B-211ENST00000576359 CLEC17AQ6ZS10 378 aa17.15■□□□□ 0.34
RAB40B-211ENST00000576359 PTMSP20962 102 aa17.15■□□□□ 0.34
RAB40B-211ENST00000576359 SKOR2Q2VWA4 1001 aaPredicted RBP17.15■□□□□ 0.34
RAB40B-211ENST00000576359 IFNL2Q8IZJ0 200 aa17.15■□□□□ 0.34
RAB40B-211ENST00000576359 LINS1Q8NG48 757 aa17.15■□□□□ 0.34
RAB40B-211ENST00000576359 KAZALD1Q96I82 304 aa17.15■□□□□ 0.34
RAB40B-211ENST00000576359 ANO2Q9NQ90 1003 aa17.15■□□□□ 0.34
RAB40B-211ENST00000576359 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
RAB40B-211ENST00000576359 PA2G4Q9UQ80 394 aaKnown RBP17.14■□□□□ 0.33
RAB40B-211ENST00000576359 SUCLG2Q96I99 432 aa17.14■□□□□ 0.33
RAB40B-211ENST00000576359 UTYO14607 1347 aa17.14■□□□□ 0.33
RAB40B-211ENST00000576359 BAG4O95429 457 aaKnown RBP17.13■□□□□ 0.33
RAB40B-211ENST00000576359 IGKV5-2P06315 115 aa17.13■□□□□ 0.33
RAB40B-211ENST00000576359 NUCB2P80303 420 aa17.13■□□□□ 0.33
RAB40B-211ENST00000576359 HSP90AB4PQ58FF6 505 aa17.13■□□□□ 0.33
RAB40B-211ENST00000576359 PANK2Q9BZ23 570 aa17.13■□□□□ 0.33
RAB40B-211ENST00000576359 CPDO75976 1380 aa17.13■□□□□ 0.33
RAB40B-211ENST00000576359 GRM8O00222 908 aa17.13■□□□□ 0.33
RAB40B-211ENST00000576359 MYL6BP14649 208 aa17.13■□□□□ 0.33
RAB40B-211ENST00000576359 ZGPATQ8N5A5 531 aaKnown RBP17.13■□□□□ 0.33
RAB40B-211ENST00000576359 USP42Q9H9J4 1324 aaKnown RBP17.13■□□□□ 0.33
RAB40B-211ENST00000576359 GOLGA6L22H0YM25 854 aa17.12■□□□□ 0.33
RAB40B-211ENST00000576359 DDX58O95786 925 aaKnown RBP17.12■□□□□ 0.33
RAB40B-211ENST00000576359 CWC22Q9HCG8 908 aaKnown RBP17.12■□□□□ 0.33
RAB40B-211ENST00000576359 CYP2E1P05181 493 aaPredicted RBP17.12■□□□□ 0.33
RAB40B-211ENST00000576359 MRE11P49959 708 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms