RNA–Protein interactions for RNA: ENST00000575643.1

PSMB6-204, Transcript of proteasome subunit beta 6, humanhuman

TSL 2

Gene PSMB6, Length 666 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-204ENST00000575643 TEFQ10587 303 aa17.76■□□□□ 0.43
PSMB6-204ENST00000575643 USPL1Q5W0Q7 1092 aa17.76■□□□□ 0.43
PSMB6-204ENST00000575643 U2AF1L5P0DN76 240 aaPredicted RBP17.75■□□□□ 0.43
PSMB6-204ENST00000575643 DPEP1P16444 411 aa17.75■□□□□ 0.43
PSMB6-204ENST00000575643 U2AF1Q01081 240 aaKnown RBP eCLIP17.75■□□□□ 0.43
PSMB6-204ENST00000575643 TTC5Q8N0Z6 440 aa17.75■□□□□ 0.43
PSMB6-204ENST00000575643 ZNF496Q96IT1 587 aaPredicted RBP17.75■□□□□ 0.43
PSMB6-204ENST00000575643 LAMB4A4D0S4 1761 aa17.75■□□□□ 0.43
PSMB6-204ENST00000575643 HEG1Q9ULI3 1381 aa17.75■□□□□ 0.43
PSMB6-204ENST00000575643 POLRMTO00411 1230 aaKnown RBP17.74■□□□□ 0.43
PSMB6-204ENST00000575643 ZNF790Q6PG37 636 aa17.74■□□□□ 0.43
PSMB6-204ENST00000575643 VSIG10Q8N0Z9 540 aa17.74■□□□□ 0.43
PSMB6-204ENST00000575643 COL11A2P13942 1736 aaPredicted RBP17.74■□□□□ 0.43
PSMB6-204ENST00000575643 ANKRD31Q8N7Z5 1873 aa17.73■□□□□ 0.43
PSMB6-204ENST00000575643 GIGYF1O75420 1035 aaPredicted RBP17.73■□□□□ 0.43
PSMB6-204ENST00000575643 TGFB2P61812 414 aa17.73■□□□□ 0.43
PSMB6-204ENST00000575643 BCL2L12Q9HB09 334 aa17.73■□□□□ 0.43
PSMB6-204ENST00000575643 BCS1LQ9Y276 419 aa17.73■□□□□ 0.43
PSMB6-204ENST00000575643 KDM3BQ7LBC6 1761 aa17.73■□□□□ 0.43
PSMB6-204ENST00000575643 CARMIL3Q8ND23 1372 aa17.72■□□□□ 0.43
PSMB6-204ENST00000575643 KCNQ3O43525 872 aa17.72■□□□□ 0.43
PSMB6-204ENST00000575643 CANXP27824 592 aaKnown RBP17.72■□□□□ 0.43
PSMB6-204ENST00000575643 NUDCQ9Y266 331 aa17.72■□□□□ 0.43
PSMB6-204ENST00000575643 ZPR1O75312 459 aa17.71■□□□□ 0.43
PSMB6-204ENST00000575643 C1QTNF8P60827 252 aa17.71■□□□□ 0.43
PSMB6-204ENST00000575643 MCM10Q7L590 875 aa17.71■□□□□ 0.43
PSMB6-204ENST00000575643 KCNA3P22001 575 aa17.7■□□□□ 0.42
PSMB6-204ENST00000575643 TM4SF1P30408 202 aa17.7■□□□□ 0.42
PSMB6-204ENST00000575643 NFIXQ14938 502 aa17.7■□□□□ 0.42
PSMB6-204ENST00000575643 ZNF526Q8TF50 670 aaPredicted RBP17.7■□□□□ 0.42
PSMB6-204ENST00000575643 NARFQ9UHQ1 456 aa17.7■□□□□ 0.42
PSMB6-204ENST00000575643 CHRNA5P30532 468 aa17.69■□□□□ 0.42
PSMB6-204ENST00000575643 DCTN1Q14203 1278 aa17.69■□□□□ 0.42
PSMB6-204ENST00000575643 PRAMEF22A3QJZ6 481 aa17.68■□□□□ 0.42
PSMB6-204ENST00000575643 BTBD11A6QL63 1104 aa17.68■□□□□ 0.42
PSMB6-204ENST00000575643 FCHSD2O94868 740 aa17.68■□□□□ 0.42
PSMB6-204ENST00000575643 EIF5P55010 431 aaKnown RBP17.68■□□□□ 0.42
PSMB6-204ENST00000575643 FMNL2Q96PY5 1086 aa17.68■□□□□ 0.42
PSMB6-204ENST00000575643 ZNF330Q9Y3S2 320 aaPredicted RBP17.68■□□□□ 0.42
PSMB6-204ENST00000575643 STARD3NLO95772 234 aa17.67■□□□□ 0.42
PSMB6-204ENST00000575643 CACNA1SQ13698 1873 aa17.67■□□□□ 0.42
PSMB6-204ENST00000575643 SENP3-EIF4A1A0A087X0R7 540 aa17.66■□□□□ 0.42
PSMB6-204ENST00000575643 PIP4K2AP48426 406 aaPredicted RBP17.66■□□□□ 0.42
PSMB6-204ENST00000575643 SBF1O95248 1867 aa17.65■□□□□ 0.42
PSMB6-204ENST00000575643 TIAM2Q8IVF5 1701 aa17.65■□□□□ 0.42
PSMB6-204ENST00000575643 A1BGP04217 495 aa17.65■□□□□ 0.42
PSMB6-204ENST00000575643 GPBP1L1Q9HC44 474 aaPredicted RBP17.65■□□□□ 0.42
PSMB6-204ENST00000575643 TBC1D9BQ66K14 1250 aa17.64■□□□□ 0.41
PSMB6-204ENST00000575643 BICDL1Q6ZP65 573 aa17.64■□□□□ 0.41
PSMB6-204ENST00000575643 RTF1Q92541 710 aaKnown RBP17.64■□□□□ 0.41
PSMB6-204ENST00000575643 SERPINB2P05120 415 aa17.63■□□□□ 0.41
PSMB6-204ENST00000575643 ARHGAP27Q6ZUM4 889 aa17.63■□□□□ 0.41
PSMB6-204ENST00000575643 PIM2Q9P1W9 311 aa17.63■□□□□ 0.41
PSMB6-204ENST00000575643 TBC1D2BQ9UPU7 963 aa17.63■□□□□ 0.41
PSMB6-204ENST00000575643 ARFGEF2Q9Y6D5 1785 aa17.62■□□□□ 0.41
PSMB6-204ENST00000575643 IL6STP40189 918 aaPredicted RBP17.62■□□□□ 0.41
PSMB6-204ENST00000575643 DALRD3Q5D0E6 543 aaKnown RBP17.62■□□□□ 0.41
PSMB6-204ENST00000575643 PLEKHF1Q96S99 279 aa17.62■□□□□ 0.41
PSMB6-204ENST00000575643 TEX13AQ9BXU3 409 aaPredicted RBP17.62■□□□□ 0.41
PSMB6-204ENST00000575643 USP16Q9Y5T5 823 aa17.62■□□□□ 0.41
PSMB6-204ENST00000575643 A0A087WZG4 1122 aa17.61■□□□□ 0.41
PSMB6-204ENST00000575643 CAMTA2O94983 1202 aa17.61■□□□□ 0.41
PSMB6-204ENST00000575643 THUMPD2Q9BTF0 503 aaKnown RBP17.6■□□□□ 0.41
PSMB6-204ENST00000575643 CEP350Q5VT06 3117 aa17.6■□□□□ 0.41
PSMB6-204ENST00000575643 TNRC6CQ9HCJ0 1690 aaKnown RBP17.59■□□□□ 0.41
PSMB6-204ENST00000575643 HTATSF1O43719 755 aaKnown RBP17.59■□□□□ 0.41
PSMB6-204ENST00000575643 CCDC24Q8N4L8 307 aa17.59■□□□□ 0.41
PSMB6-204ENST00000575643 MIS18AQ9NYP9 233 aa17.59■□□□□ 0.41
PSMB6-204ENST00000575643 CCDC88AQ3V6T2 1871 aa17.58■□□□□ 0.41
PSMB6-204ENST00000575643 RASSF7Q02833 373 aa17.58■□□□□ 0.4
PSMB6-204ENST00000575643 C9orf131Q5VYM1 1079 aa17.58■□□□□ 0.4
PSMB6-204ENST00000575643 DZIP3Q86Y13 1208 aaKnown RBP17.58■□□□□ 0.4
PSMB6-204ENST00000575643 NBPF26B4DH59 902 aa17.57■□□□□ 0.4
PSMB6-204ENST00000575643 KIF3CO14782 793 aa17.57■□□□□ 0.4
PSMB6-204ENST00000575643 SNRPA1P09661 255 aaKnown RBP17.57■□□□□ 0.4
PSMB6-204ENST00000575643 NFE2L2Q16236 605 aa17.57■□□□□ 0.4
PSMB6-204ENST00000575643 PRR5LQ6MZQ0 368 aa17.57■□□□□ 0.4
PSMB6-204ENST00000575643 NBPF10Q6P3W6 841 aaKnown RBP17.57■□□□□ 0.4
PSMB6-204ENST00000575643 C2CD5Q86YS7 1000 aa17.57■□□□□ 0.4
PSMB6-204ENST00000575643 NBPF15Q8N660 670 aa17.57■□□□□ 0.4
PSMB6-204ENST00000575643 FER1L6Q2WGJ9 1857 aa17.56■□□□□ 0.4
PSMB6-204ENST00000575643 MAPK8IP3Q9UPT6 1336 aa17.55■□□□□ 0.4
PSMB6-204ENST00000575643 DDX10Q13206 875 aaKnown RBP17.55■□□□□ 0.4
PSMB6-204ENST00000575643 TAF7Q15545 349 aaPredicted RBP17.55■□□□□ 0.4
PSMB6-204ENST00000575643 RNF181Q9P0P0 153 aa17.55■□□□□ 0.4
PSMB6-204ENST00000575643 SLX4Q8IY92 1834 aa17.55■□□□□ 0.4
PSMB6-204ENST00000575643 NUP98P52948 1817 aa17.54■□□□□ 0.4
PSMB6-204ENST00000575643 NEFMP07197 916 aa17.54■□□□□ 0.4
PSMB6-204ENST00000575643 PRELPP51888 382 aa17.54■□□□□ 0.4
PSMB6-204ENST00000575643 NMRK2Q9NPI5 230 aa17.54■□□□□ 0.4
PSMB6-204ENST00000575643 RALBP1Q15311 655 aa17.53■□□□□ 0.4
PSMB6-204ENST00000575643 CNBD1Q8NA66 436 aa17.53■□□□□ 0.4
PSMB6-204ENST00000575643 MYBBP1AQ9BQG0 1328 aaKnown RBP17.52■□□□□ 0.4
PSMB6-204ENST00000575643 NPM2Q86SE8 214 aaKnown RBP17.52■□□□□ 0.4
PSMB6-204ENST00000575643 TTLL6Q8N841 843 aa17.52■□□□□ 0.4
PSMB6-204ENST00000575643 DICER1Q9UPY3 1922 aaKnown RBP17.51■□□□□ 0.39
PSMB6-204ENST00000575643 H0YIN7 160 aa17.51■□□□□ 0.39
PSMB6-204ENST00000575643 NFKBIEO00221 500 aa17.51■□□□□ 0.39
PSMB6-204ENST00000575643 SETDB2Q96T68 719 aa17.51■□□□□ 0.39
PSMB6-204ENST00000575643 EIF4A1P60842 406 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms