RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 COL24A1Q17RW2 1714 aa17.5■□□□□ 0.39
RPAIN-216ENST00000575599 ZNF496Q96IT1 587 aaPredicted RBP17.5■□□□□ 0.39
RPAIN-216ENST00000575599 ADAMTS8Q9UP79 889 aa17.5■□□□□ 0.39
RPAIN-216ENST00000575599 KCNQ3O43525 872 aa17.49■□□□□ 0.39
RPAIN-216ENST00000575599 ARXQ96QS3 562 aa17.49■□□□□ 0.39
RPAIN-216ENST00000575599 THUMPD2Q9BTF0 503 aaKnown RBP17.49■□□□□ 0.39
RPAIN-216ENST00000575599 HEG1Q9ULI3 1381 aa17.48■□□□□ 0.39
RPAIN-216ENST00000575599 RPS6KA4O75676 772 aa17.48■□□□□ 0.39
RPAIN-216ENST00000575599 RIPK4P57078 832 aa17.48■□□□□ 0.39
RPAIN-216ENST00000575599 TRAPPC3LQ5T215 181 aa17.48■□□□□ 0.39
RPAIN-216ENST00000575599 VSIG10Q8N0Z9 540 aa17.48■□□□□ 0.39
RPAIN-216ENST00000575599 KLHL34Q8N239 644 aa17.48■□□□□ 0.39
RPAIN-216ENST00000575599 RRP7AQ9Y3A4 280 aaKnown RBP17.48■□□□□ 0.39
RPAIN-216ENST00000575599 C4AP0C0L4 1744 aa17.47■□□□□ 0.39
RPAIN-216ENST00000575599 CCDC184Q52MB2 194 aa17.47■□□□□ 0.39
RPAIN-216ENST00000575599 RUNDC1Q96C34 613 aa17.47■□□□□ 0.39
RPAIN-216ENST00000575599 FMNL2Q96PY5 1086 aa17.47■□□□□ 0.39
RPAIN-216ENST00000575599 FHDC1Q9C0D6 1143 aaPredicted RBP17.47■□□□□ 0.39
RPAIN-216ENST00000575599 CCDC87Q9NVE4 849 aa17.47■□□□□ 0.39
RPAIN-216ENST00000575599 CYP19A1P11511 503 aaPredicted RBP17.46■□□□□ 0.39
RPAIN-216ENST00000575599 TMPOP42166 694 aaKnown RBP17.46■□□□□ 0.39
RPAIN-216ENST00000575599 POLA2Q14181 598 aa17.46■□□□□ 0.39
RPAIN-216ENST00000575599 NEUROD2Q15784 382 aa17.46■□□□□ 0.39
RPAIN-216ENST00000575599 INTS5Q6P9B9 1019 aaKnown RBP17.46■□□□□ 0.39
RPAIN-216ENST00000575599 ARHGEF1Q92888 912 aaKnown RBP17.46■□□□□ 0.39
RPAIN-216ENST00000575599 MIS18AQ9NYP9 233 aa17.46■□□□□ 0.39
RPAIN-216ENST00000575599 RFC4P35249 363 aa17.45■□□□□ 0.38
RPAIN-216ENST00000575599 TAF7Q15545 349 aaPredicted RBP17.45■□□□□ 0.38
RPAIN-216ENST00000575599 ZBTB1Q9Y2K1 713 aa17.44■□□□□ 0.38
RPAIN-216ENST00000575599 HAX1O00165 279 aa17.43■□□□□ 0.38
RPAIN-216ENST00000575599 STARD3NLO95772 234 aa17.43■□□□□ 0.38
RPAIN-216ENST00000575599 LMOD3Q0VAK6 560 aa17.43■□□□□ 0.38
RPAIN-216ENST00000575599 KDM3BQ7LBC6 1761 aa17.43■□□□□ 0.38
RPAIN-216ENST00000575599 SOS1Q07889 1333 aaPredicted RBP17.43■□□□□ 0.38
RPAIN-216ENST00000575599 CANXP27824 592 aaKnown RBP17.42■□□□□ 0.38
RPAIN-216ENST00000575599 PNISRQ8TF01 805 aaKnown RBP17.42■□□□□ 0.38
RPAIN-216ENST00000575599 SYT17Q9BSW7 474 aa17.42■□□□□ 0.38
RPAIN-216ENST00000575599 MRS2Q9HD23 443 aa17.42■□□□□ 0.38
RPAIN-216ENST00000575599 TEX13AQ9BXU3 409 aaPredicted RBP17.41■□□□□ 0.38
RPAIN-216ENST00000575599 SRP68Q9UHB9 627 aaKnown RBP17.41■□□□□ 0.38
RPAIN-216ENST00000575599 COL15A1P39059 1388 aa17.41■□□□□ 0.38
RPAIN-216ENST00000575599 PRAMEF22A3QJZ6 481 aa17.4■□□□□ 0.38
RPAIN-216ENST00000575599 ZNF330Q9Y3S2 320 aaPredicted RBP17.4■□□□□ 0.38
RPAIN-216ENST00000575599 USP42Q9H9J4 1324 aaKnown RBP17.4■□□□□ 0.38
RPAIN-216ENST00000575599 SNRPA1P09661 255 aaKnown RBP17.4■□□□□ 0.38
RPAIN-216ENST00000575599 GYS1P13807 737 aa17.4■□□□□ 0.38
RPAIN-216ENST00000575599 MMP10P09238 476 aa17.39■□□□□ 0.37
RPAIN-216ENST00000575599 PIP4P2Q8N4L2 257 aa17.39■□□□□ 0.37
RPAIN-216ENST00000575599 TSPYL4Q9UJ04 414 aa17.39■□□□□ 0.37
RPAIN-216ENST00000575599 USP16Q9Y5T5 823 aa17.39■□□□□ 0.37
RPAIN-216ENST00000575599 APAF1O14727 1248 aa17.38■□□□□ 0.37
RPAIN-216ENST00000575599 ZPR1O75312 459 aa17.38■□□□□ 0.37
RPAIN-216ENST00000575599 A1BGP04217 495 aa17.38■□□□□ 0.37
RPAIN-216ENST00000575599 NLGN1Q8N2Q7 840 aa17.38■□□□□ 0.37
RPAIN-216ENST00000575599 TRIM35Q9UPQ4 493 aa17.38■□□□□ 0.37
RPAIN-216ENST00000575599 LAMB4A4D0S4 1761 aa17.37■□□□□ 0.37
RPAIN-216ENST00000575599 PIP4K2AP48426 406 aaPredicted RBP17.37■□□□□ 0.37
RPAIN-216ENST00000575599 USPL1Q5W0Q7 1092 aa17.37■□□□□ 0.37
RPAIN-216ENST00000575599 EIF4A1P60842 406 aaKnown RBP17.36■□□□□ 0.37
RPAIN-216ENST00000575599 FKBP8Q14318 412 aa17.36■□□□□ 0.37
RPAIN-216ENST00000575599 NLGN2Q8NFZ4 835 aa17.36■□□□□ 0.37
RPAIN-216ENST00000575599 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
RPAIN-216ENST00000575599 SENP3-EIF4A1A0A087X0R7 540 aa17.35■□□□□ 0.37
RPAIN-216ENST00000575599 IL6STP40189 918 aaPredicted RBP17.35■□□□□ 0.37
RPAIN-216ENST00000575599 EIF5P55010 431 aaKnown RBP17.35■□□□□ 0.37
RPAIN-216ENST00000575599 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
RPAIN-216ENST00000575599 NARFQ9UHQ1 456 aa17.35■□□□□ 0.37
RPAIN-216ENST00000575599 A0A087WZG4 1122 aa17.34■□□□□ 0.37
RPAIN-216ENST00000575599 GIGYF1O75420 1035 aaPredicted RBP17.33■□□□□ 0.36
RPAIN-216ENST00000575599 PARP3Q9Y6F1 533 aa17.33■□□□□ 0.36
RPAIN-216ENST00000575599 SCN7AQ01118 1682 aa17.33■□□□□ 0.36
RPAIN-216ENST00000575599 PELP1Q8IZL8 1130 aaKnown RBP17.32■□□□□ 0.36
RPAIN-216ENST00000575599 BABAM1Q9NWV8 329 aa17.32■□□□□ 0.36
RPAIN-216ENST00000575599 TBC1D2BQ9UPU7 963 aa17.32■□□□□ 0.36
RPAIN-216ENST00000575599 CD2APQ9Y5K6 639 aa17.32■□□□□ 0.36
RPAIN-216ENST00000575599 BCL2L12Q9HB09 334 aa17.31■□□□□ 0.36
RPAIN-216ENST00000575599 DDR1Q08345 913 aa17.3■□□□□ 0.36
RPAIN-216ENST00000575599 MIER1Q8N108 512 aa17.3■□□□□ 0.36
RPAIN-216ENST00000575599 NBPF26B4DH59 902 aa17.29■□□□□ 0.36
RPAIN-216ENST00000575599 CHL1O00533 1208 aa17.29■□□□□ 0.36
RPAIN-216ENST00000575599 NBPF10Q6P3W6 841 aaKnown RBP17.29■□□□□ 0.36
RPAIN-216ENST00000575599 DZIP3Q86Y13 1208 aaKnown RBP17.29■□□□□ 0.36
RPAIN-216ENST00000575599 FAM9BQ8IZU0 186 aa17.29■□□□□ 0.36
RPAIN-216ENST00000575599 NBPF15Q8N660 670 aa17.29■□□□□ 0.36
RPAIN-216ENST00000575599 BCORQ6W2J9 1755 aa17.29■□□□□ 0.36
RPAIN-216ENST00000575599 NFIXQ14938 502 aa17.28■□□□□ 0.36
RPAIN-216ENST00000575599 GPR162Q16538 588 aa17.28■□□□□ 0.36
RPAIN-216ENST00000575599 BICDL1Q6ZP65 573 aa17.28■□□□□ 0.36
RPAIN-216ENST00000575599 C10orf71Q711Q0 1435 aa17.28■□□□□ 0.36
RPAIN-216ENST00000575599 KIF13BQ9NQT8 1826 aa17.28■□□□□ 0.36
RPAIN-216ENST00000575599 POLRMTO00411 1230 aaKnown RBP17.28■□□□□ 0.36
RPAIN-216ENST00000575599 EIF2S2P20042 333 aaKnown RBP17.28■□□□□ 0.36
RPAIN-216ENST00000575599 TM4SF1P30408 202 aa17.28■□□□□ 0.36
RPAIN-216ENST00000575599 CALD1Q05682 793 aaKnown RBP17.28■□□□□ 0.36
RPAIN-216ENST00000575599 KRT24Q2M2I5 525 aa17.28■□□□□ 0.36
RPAIN-216ENST00000575599 NGEFQ8N5V2 710 aa17.28■□□□□ 0.36
RPAIN-216ENST00000575599 CFAP44Q96MT7 982 aa17.28■□□□□ 0.36
RPAIN-216ENST00000575599 WWC3Q9ULE0 1092 aa17.28■□□□□ 0.36
RPAIN-216ENST00000575599 CAMTA2O94983 1202 aa17.27■□□□□ 0.35
RPAIN-216ENST00000575599 MYL6BP14649 208 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms