RNA–Protein interactions for RNA: ENST00000574744.1

TOM1L1-219, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-219ENST00000574744 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
TOM1L1-219ENST00000574744 SHANK3Q9BYB0 1731 aa11.75□□□□□ -0.53
TOM1L1-219ENST00000574744 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
TOM1L1-219ENST00000574744 ZCRB1Q8TBF4 217 aaKnown RBP11.75□□□□□ -0.53
TOM1L1-219ENST00000574744 IBTKQ9P2D0 1353 aaPredicted RBP11.75□□□□□ -0.53
TOM1L1-219ENST00000574744 ERVV-2B6SEH9 535 aa11.74□□□□□ -0.53
TOM1L1-219ENST00000574744 CYP27B1O15528 508 aa11.74□□□□□ -0.53
TOM1L1-219ENST00000574744 EVA1CP58658 441 aa11.74□□□□□ -0.53
TOM1L1-219ENST00000574744 FLIIQ13045 1269 aa11.74□□□□□ -0.53
TOM1L1-219ENST00000574744 SMC5Q8IY18 1101 aa11.74□□□□□ -0.53
TOM1L1-219ENST00000574744 DISP2A7MBM2 1401 aa11.74□□□□□ -0.53
TOM1L1-219ENST00000574744 NWD2Q9ULI1 1742 aa11.74□□□□□ -0.53
TOM1L1-219ENST00000574744 WNK3Q9BYP7 1800 aa11.74□□□□□ -0.53
TOM1L1-219ENST00000574744 GIGYF1O75420 1035 aaPredicted RBP11.73□□□□□ -0.53
TOM1L1-219ENST00000574744 LRP6O75581 1613 aa11.73□□□□□ -0.53
TOM1L1-219ENST00000574744 PAPPAQ13219 1627 aa11.73□□□□□ -0.53
TOM1L1-219ENST00000574744 NRAPQ86VF7 1730 aa11.73□□□□□ -0.53
TOM1L1-219ENST00000574744 RBM19Q9Y4C8 960 aaKnown RBP11.73□□□□□ -0.53
TOM1L1-219ENST00000574744 ATP10DQ9P241 1426 aa11.72□□□□□ -0.53
TOM1L1-219ENST00000574744 RIOK3O14730 519 aaKnown RBP11.72□□□□□ -0.53
TOM1L1-219ENST00000574744 ZNF790Q6PG37 636 aa11.72□□□□□ -0.53
TOM1L1-219ENST00000574744 LARP1Q6PKG0 1096 aaKnown RBP11.72□□□□□ -0.53
TOM1L1-219ENST00000574744 RPAP2Q8IXW5 612 aaPredicted RBP11.72□□□□□ -0.53
TOM1L1-219ENST00000574744 GCC1Q96CN9 775 aa11.72□□□□□ -0.53
TOM1L1-219ENST00000574744 CDCA7Q9BWT1 371 aaPredicted RBP11.72□□□□□ -0.53
TOM1L1-219ENST00000574744 DBF4Q9UBU7 674 aaPredicted RBP11.72□□□□□ -0.53
TOM1L1-219ENST00000574744 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
TOM1L1-219ENST00000574744 UBR2Q8IWV8 1755 aa11.72□□□□□ -0.53
TOM1L1-219ENST00000574744 G2E3Q7L622 706 aa11.71□□□□□ -0.53
TOM1L1-219ENST00000574744 KIF12Q96FN5 646 aa11.71□□□□□ -0.53
TOM1L1-219ENST00000574744 BTG4Q9NY30 223 aa11.71□□□□□ -0.53
TOM1L1-219ENST00000574744 ERBB4Q15303 1308 aa11.7□□□□□ -0.54
TOM1L1-219ENST00000574744 KCNQ3O43525 872 aa11.7□□□□□ -0.54
TOM1L1-219ENST00000574744 CABP4P57796 275 aa11.7□□□□□ -0.54
TOM1L1-219ENST00000574744 FKBP5Q13451 457 aaPredicted RBP11.7□□□□□ -0.54
TOM1L1-219ENST00000574744 BACH2Q9BYV9 841 aa11.7□□□□□ -0.54
TOM1L1-219ENST00000574744 HYPKQ9NX55 129 aa11.7□□□□□ -0.54
TOM1L1-219ENST00000574744 THRAP3Q9Y2W1 955 aaKnown RBP11.7□□□□□ -0.54
TOM1L1-219ENST00000574744 GLI3P10071 1580 aa11.7□□□□□ -0.54
TOM1L1-219ENST00000574744 TNS2Q63HR2 1409 aa11.69□□□□□ -0.54
TOM1L1-219ENST00000574744 GNAI3P08754 354 aa11.69□□□□□ -0.54
TOM1L1-219ENST00000574744 EVX2Q03828 476 aa11.69□□□□□ -0.54
TOM1L1-219ENST00000574744 TTC5Q8N0Z6 440 aa11.69□□□□□ -0.54
TOM1L1-219ENST00000574744 ANKRD44Q8N8A2 993 aa11.69□□□□□ -0.54
TOM1L1-219ENST00000574744 NFATC2IPQ8NCF5 419 aa11.69□□□□□ -0.54
TOM1L1-219ENST00000574744 FMNL2Q96PY5 1086 aa11.69□□□□□ -0.54
TOM1L1-219ENST00000574744 DDX21Q9NR30 783 aaKnown RBP eCLIP11.69□□□□□ -0.54
TOM1L1-219ENST00000574744 STRN4Q9NRL3 753 aa11.69□□□□□ -0.54
TOM1L1-219ENST00000574744 PDZRN3Q9UPQ7 1066 aa11.69□□□□□ -0.54
TOM1L1-219ENST00000574744 C5P01031 1676 aa11.68□□□□□ -0.54
TOM1L1-219ENST00000574744 SNRPA1P09661 255 aaKnown RBP11.68□□□□□ -0.54
TOM1L1-219ENST00000574744 PDE4AP27815 886 aa11.68□□□□□ -0.54
TOM1L1-219ENST00000574744 FAM161AQ3B820 660 aa11.68□□□□□ -0.54
TOM1L1-219ENST00000574744 CHPF2Q9P2E5 772 aa11.68□□□□□ -0.54
TOM1L1-219ENST00000574744 SLIT2O94813 1529 aa11.68□□□□□ -0.54
TOM1L1-219ENST00000574744 JCADQ9P266 1359 aa11.67□□□□□ -0.54
TOM1L1-219ENST00000574744 MAP3K13O43283 966 aa11.67□□□□□ -0.54
TOM1L1-219ENST00000574744 HMMRO75330 724 aa11.67□□□□□ -0.54
TOM1L1-219ENST00000574744 NUCB1Q02818 461 aa11.67□□□□□ -0.54
TOM1L1-219ENST00000574744 TOGARAM1Q9Y4F4 1720 aa11.66□□□□□ -0.54
TOM1L1-219ENST00000574744 KCPQ6ZWJ8 1503 aa11.66□□□□□ -0.54
TOM1L1-219ENST00000574744 UBAP1LF5GYI3 381 aa11.66□□□□□ -0.54
TOM1L1-219ENST00000574744 HAX1O00165 279 aa11.66□□□□□ -0.54
TOM1L1-219ENST00000574744 ALDH1L1O75891 902 aa11.66□□□□□ -0.54
TOM1L1-219ENST00000574744 DDX58O95786 925 aaKnown RBP11.66□□□□□ -0.54
TOM1L1-219ENST00000574744 GNAI2P04899 355 aa11.66□□□□□ -0.54
TOM1L1-219ENST00000574744 EIF2S2P20042 333 aaKnown RBP11.66□□□□□ -0.54
TOM1L1-219ENST00000574744 CEP85Q6P2H3 762 aa11.66□□□□□ -0.54
TOM1L1-219ENST00000574744 POTEHQ6S545 545 aa11.66□□□□□ -0.54
TOM1L1-219ENST00000574744 DNAAF4Q8WXU2 420 aa11.66□□□□□ -0.54
TOM1L1-219ENST00000574744 PHF12Q96QT6 1004 aa11.66□□□□□ -0.54
TOM1L1-219ENST00000574744 DCTPP1Q9H773 170 aa11.66□□□□□ -0.54
TOM1L1-219ENST00000574744 HDAC5Q9UQL6 1122 aa11.66□□□□□ -0.54
TOM1L1-219ENST00000574744 F6X3S4 739 aa11.65□□□□□ -0.54
TOM1L1-219ENST00000574744 SIRT2Q8IXJ6 389 aa11.65□□□□□ -0.54
TOM1L1-219ENST00000574744 ZNF579Q8NAF0 562 aaKnown RBP11.65□□□□□ -0.54
TOM1L1-219ENST00000574744 ZNF496Q96IT1 587 aaPredicted RBP11.65□□□□□ -0.54
TOM1L1-219ENST00000574744 MEIS3Q99687 375 aa11.65□□□□□ -0.54
TOM1L1-219ENST00000574744 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
TOM1L1-219ENST00000574744 SRCIN1Q9C0H9 1055 aa11.65□□□□□ -0.54
TOM1L1-219ENST00000574744 PCDHB8Q9UN66 801 aa11.65□□□□□ -0.54
TOM1L1-219ENST00000574744 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.54
TOM1L1-219ENST00000574744 ADCY9O60503 1353 aa11.65□□□□□ -0.55
TOM1L1-219ENST00000574744 SPATA31A1Q5TZJ5 1347 aa11.64□□□□□ -0.55
TOM1L1-219ENST00000574744 RGS3P49796 1198 aa11.64□□□□□ -0.55
TOM1L1-219ENST00000574744 PDIA6Q15084 440 aa11.64□□□□□ -0.55
TOM1L1-219ENST00000574744 SLC4A10Q6U841 1118 aa11.64□□□□□ -0.55
TOM1L1-219ENST00000574744 KSR2Q6VAB6 950 aa11.64□□□□□ -0.55
TOM1L1-219ENST00000574744 BARGINQ6ZT62 677 aa11.64□□□□□ -0.55
TOM1L1-219ENST00000574744 CHD1LQ86WJ1 897 aa11.64□□□□□ -0.55
TOM1L1-219ENST00000574744 NECTIN2Q92692 538 aa11.64□□□□□ -0.55
TOM1L1-219ENST00000574744 PHAXQ9H814 394 aaKnown RBP11.64□□□□□ -0.55
TOM1L1-219ENST00000574744 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.63□□□□□ -0.55
TOM1L1-219ENST00000574744 SPATA31A6Q5VVP1 1343 aa11.63□□□□□ -0.55
TOM1L1-219ENST00000574744 SLC39A6Q13433 755 aa11.63□□□□□ -0.55
TOM1L1-219ENST00000574744 C8orf34Q49A92 452 aa11.63□□□□□ -0.55
TOM1L1-219ENST00000574744 BEND3Q5T5X7 828 aa11.63□□□□□ -0.55
TOM1L1-219ENST00000574744 VSIG10Q8N0Z9 540 aa11.63□□□□□ -0.55
TOM1L1-219ENST00000574744 C1orf115Q9H7X2 142 aa11.63□□□□□ -0.55
TOM1L1-219ENST00000574744 ITGB4P16144 1822 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms