RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 PRDM10Q9NQV6 1147 aa7.63□□□□□ -1.19
TRIM25-208ENST00000574234 RGS19P49795 217 aa7.62□□□□□ -1.19
TRIM25-208ENST00000574234 MLLT1Q03111 559 aaPredicted RBP7.62□□□□□ -1.19
TRIM25-208ENST00000574234 SH3D19Q5HYK7 790 aa7.62□□□□□ -1.19
TRIM25-208ENST00000574234 DPY19L2Q6NUT2 758 aa7.62□□□□□ -1.19
TRIM25-208ENST00000574234 COL23A1Q86Y22 540 aaPredicted RBP7.62□□□□□ -1.19
TRIM25-208ENST00000574234 MICALL2Q8IY33 904 aa7.62□□□□□ -1.19
TRIM25-208ENST00000574234 SMC1BQ8NDV3 1235 aa7.62□□□□□ -1.19
TRIM25-208ENST00000574234 REPIN1Q9BWE0 567 aaKnown RBP7.62□□□□□ -1.19
TRIM25-208ENST00000574234 CD44P16070 742 aaKnown RBP7.61□□□□□ -1.19
TRIM25-208ENST00000574234 MS4A3Q96HJ5 214 aa7.61□□□□□ -1.19
TRIM25-208ENST00000574234 AXIN2Q9Y2T1 843 aa7.61□□□□□ -1.19
TRIM25-208ENST00000574234 CCDC88AQ3V6T2 1871 aa7.61□□□□□ -1.19
TRIM25-208ENST00000574234 KCPQ6ZWJ8 1503 aa7.61□□□□□ -1.19
TRIM25-208ENST00000574234 C4BP0C0L5 1744 aa7.61□□□□□ -1.19
TRIM25-208ENST00000574234 KDM2BQ8NHM5 1336 aa7.6□□□□□ -1.19
TRIM25-208ENST00000574234 OXER1Q8TDS5 423 aa7.6□□□□□ -1.19
TRIM25-208ENST00000574234 TRAIPQ9BWF2 469 aa7.6□□□□□ -1.19
TRIM25-208ENST00000574234 NFAT5O94916 1531 aa7.6□□□□□ -1.19
TRIM25-208ENST00000574234 TIAM2Q8IVF5 1701 aa7.59□□□□□ -1.19
TRIM25-208ENST00000574234 TTLL13PA6NNM8 815 aa7.59□□□□□ -1.19
TRIM25-208ENST00000574234 HMGB2P26583 209 aaKnown RBP7.59□□□□□ -1.19
TRIM25-208ENST00000574234 TIE1P35590 1138 aa7.59□□□□□ -1.19
TRIM25-208ENST00000574234 ITGAEP38570 1179 aa7.59□□□□□ -1.19
TRIM25-208ENST00000574234 PRIM1P49642 420 aaKnown RBP7.59□□□□□ -1.19
TRIM25-208ENST00000574234 PTGDRQ13258 359 aa7.59□□□□□ -1.19
TRIM25-208ENST00000574234 MSL1Q68DK7 614 aa7.59□□□□□ -1.19
TRIM25-208ENST00000574234 FLAD1Q8NFF5 587 aa7.59□□□□□ -1.19
TRIM25-208ENST00000574234 TMUB1Q9BVT8 246 aa7.59□□□□□ -1.19
TRIM25-208ENST00000574234 TRAK1Q9UPV9 953 aa7.59□□□□□ -1.19
TRIM25-208ENST00000574234 ANKRD36BQ8N2N9 1353 aa7.59□□□□□ -1.2
TRIM25-208ENST00000574234 C2orf72A6NCS6 295 aa7.58□□□□□ -1.2
TRIM25-208ENST00000574234 ARHGEF25Q86VW2 580 aa7.58□□□□□ -1.2
TRIM25-208ENST00000574234 NSD2O96028 1365 aa7.58□□□□□ -1.2
TRIM25-208ENST00000574234 PDE4DIPQ5VU43 2346 aa7.57□□□□□ -1.2
TRIM25-208ENST00000574234 ITGB4P16144 1822 aa7.57□□□□□ -1.2
TRIM25-208ENST00000574234 CSB-PGBD3P0DP91 1061 aa7.57□□□□□ -1.2
TRIM25-208ENST00000574234 SKIV2LQ15477 1246 aaKnown RBP7.57□□□□□ -1.2
TRIM25-208ENST00000574234 PIP4P2Q8N4L2 257 aa7.57□□□□□ -1.2
TRIM25-208ENST00000574234 DDX12PQ92771 950 aa7.57□□□□□ -1.2
TRIM25-208ENST00000574234 ABHD8Q96I13 439 aa7.57□□□□□ -1.2
TRIM25-208ENST00000574234 DICER1Q9UPY3 1922 aaKnown RBP7.56□□□□□ -1.2
TRIM25-208ENST00000574234 NSD3Q9BZ95 1437 aa7.56□□□□□ -1.2
TRIM25-208ENST00000574234 FOXN1O15353 648 aa7.56□□□□□ -1.2
TRIM25-208ENST00000574234 IL2RBP14784 551 aa7.56□□□□□ -1.2
TRIM25-208ENST00000574234 KCNH5Q8NCM2 988 aa7.56□□□□□ -1.2
TRIM25-208ENST00000574234 CDK19Q9BWU1 502 aa7.56□□□□□ -1.2
TRIM25-208ENST00000574234 TMEM121BQ9BXQ6 578 aaPredicted RBP7.56□□□□□ -1.2
TRIM25-208ENST00000574234 SERPINA10Q9UK55 444 aa7.56□□□□□ -1.2
TRIM25-208ENST00000574234 CCNL1Q9UK58 526 aaPredicted RBP7.56□□□□□ -1.2
TRIM25-208ENST00000574234 MAP2P11137 1827 aaKnown RBP7.55□□□□□ -1.2
TRIM25-208ENST00000574234 CTCFP49711 727 aaPredicted RBP7.55□□□□□ -1.2
TRIM25-208ENST00000574234 KCNQ4P56696 695 aa7.55□□□□□ -1.2
TRIM25-208ENST00000574234 POM121Q96HA1 1249 aa7.55□□□□□ -1.2
TRIM25-208ENST00000574234 RRAGCQ9HB90 399 aa7.55□□□□□ -1.2
TRIM25-208ENST00000574234 C4AP0C0L4 1744 aa7.55□□□□□ -1.2
TRIM25-208ENST00000574234 MON2Q7Z3U7 1717 aa7.55□□□□□ -1.2
TRIM25-208ENST00000574234 ERBB3P21860 1342 aa7.54□□□□□ -1.2
TRIM25-208ENST00000574234 ZC3H4Q9UPT8 1303 aaKnown RBP7.54□□□□□ -1.2
TRIM25-208ENST00000574234 RGPD2P0DJD1 1756 aa7.54□□□□□ -1.2
TRIM25-208ENST00000574234 CLCN1P35523 988 aa7.54□□□□□ -1.2
TRIM25-208ENST00000574234 TGFB2P61812 414 aa7.54□□□□□ -1.2
TRIM25-208ENST00000574234 KCTD17Q8N5Z5 321 aa7.54□□□□□ -1.2
TRIM25-208ENST00000574234 PDCD7Q8N8D1 485 aaKnown RBP7.54□□□□□ -1.2
TRIM25-208ENST00000574234 BMP2KQ9NSY1 1161 aaPredicted RBP7.54□□□□□ -1.2
TRIM25-208ENST00000574234 DLEC1Q9Y238 1755 aa7.54□□□□□ -1.2
TRIM25-208ENST00000574234 THSD7BQ9C0I4 1608 aa7.53□□□□□ -1.2
TRIM25-208ENST00000574234 C9orf131Q5VYM1 1079 aa7.53□□□□□ -1.2
TRIM25-208ENST00000574234 ARHGAP27Q6ZUM4 889 aa7.53□□□□□ -1.2
TRIM25-208ENST00000574234 AIDAQ96BJ3 306 aa7.53□□□□□ -1.2
TRIM25-208ENST00000574234 CCDC97Q96F63 343 aaPredicted RBP7.53□□□□□ -1.2
TRIM25-208ENST00000574234 USP47Q96K76 1375 aa7.53□□□□□ -1.2
TRIM25-208ENST00000574234 RAD21O60216 631 aa7.52□□□□□ -1.21
TRIM25-208ENST00000574234 PROCA1Q8NCQ7 364 aaPredicted RBP7.52□□□□□ -1.21
TRIM25-208ENST00000574234 GPCPD1Q9NPB8 672 aa7.52□□□□□ -1.21
TRIM25-208ENST00000574234 TRIM35Q9UPQ4 493 aa7.52□□□□□ -1.21
TRIM25-208ENST00000574234 BCS1LQ9Y276 419 aa7.52□□□□□ -1.21
TRIM25-208ENST00000574234 KDM6AO15550 1401 aaPredicted RBP7.52□□□□□ -1.21
TRIM25-208ENST00000574234 CNTNAP1P78357 1384 aa7.51□□□□□ -1.21
TRIM25-208ENST00000574234 SSTR3P32745 418 aaPredicted RBP7.51□□□□□ -1.21
TRIM25-208ENST00000574234 LOC105371045A0A1W2PR82 267 aa7.5□□□□□ -1.21
TRIM25-208ENST00000574234 TBC1D12O60347 775 aa7.5□□□□□ -1.21
TRIM25-208ENST00000574234 EVI5O60447 810 aa7.5□□□□□ -1.21
TRIM25-208ENST00000574234 VEGFAP15692 232 aaPredicted RBP7.5□□□□□ -1.21
TRIM25-208ENST00000574234 MDM2Q00987 491 aaPredicted RBP7.5□□□□□ -1.21
TRIM25-208ENST00000574234 SYTL4Q96C24 671 aaPredicted RBP7.5□□□□□ -1.21
TRIM25-208ENST00000574234 NPDC1Q9NQX5 325 aaPredicted RBP7.5□□□□□ -1.21
TRIM25-208ENST00000574234 PLSCR2Q9NRY7 297 aa7.5□□□□□ -1.21
TRIM25-208ENST00000574234 BOLA1Q9Y3E2 137 aa7.5□□□□□ -1.21
TRIM25-208ENST00000574234 ZNF831Q5JPB2 1677 aa7.5□□□□□ -1.21
TRIM25-208ENST00000574234 SCN4AP35499 1836 aa7.5□□□□□ -1.21
TRIM25-208ENST00000574234 SPDYE5A6NIY4 337 aa7.49□□□□□ -1.21
TRIM25-208ENST00000574234 CCDC85CA6NKD9 419 aa7.49□□□□□ -1.21
TRIM25-208ENST00000574234 SSFA2P28290 1259 aa7.49□□□□□ -1.21
TRIM25-208ENST00000574234 LBX1P52954 281 aa7.49□□□□□ -1.21
TRIM25-208ENST00000574234 CHRDL2Q6WN34 429 aa7.49□□□□□ -1.21
TRIM25-208ENST00000574234 STAC3Q96MF2 364 aa7.49□□□□□ -1.21
TRIM25-208ENST00000574234 PHOX2BQ99453 314 aa7.49□□□□□ -1.21
TRIM25-208ENST00000574234 BEGAINQ9BUH8 593 aa7.49□□□□□ -1.21
TRIM25-208ENST00000574234 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms