RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 SCN7AQ01118 1682 aa12.88□□□□□ -0.35
NDE1-210ENST00000574163 CYP19A1P11511 503 aaPredicted RBP12.87□□□□□ -0.35
NDE1-210ENST00000574163 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
NDE1-210ENST00000574163 TAF7Q15545 349 aaPredicted RBP12.87□□□□□ -0.35
NDE1-210ENST00000574163 DNAJC10Q8IXB1 793 aa12.87□□□□□ -0.35
NDE1-210ENST00000574163 PPP1R1BQ9UD71 204 aaPredicted RBP12.87□□□□□ -0.35
NDE1-210ENST00000574163 SOS1Q07889 1333 aaPredicted RBP12.87□□□□□ -0.35
NDE1-210ENST00000574163 PHF14O94880 888 aa12.86□□□□□ -0.35
NDE1-210ENST00000574163 STARD3NLO95772 234 aa12.86□□□□□ -0.35
NDE1-210ENST00000574163 POLD1P28340 1107 aa12.86□□□□□ -0.35
NDE1-210ENST00000574163 RIPK4P57078 832 aa12.86□□□□□ -0.35
NDE1-210ENST00000574163 CCDC146Q8IYE0 955 aa12.86□□□□□ -0.35
NDE1-210ENST00000574163 MRS2Q9HD23 443 aa12.86□□□□□ -0.35
NDE1-210ENST00000574163 BABAM1Q9NWV8 329 aa12.86□□□□□ -0.35
NDE1-210ENST00000574163 INTS5Q6P9B9 1019 aaKnown RBP12.85□□□□□ -0.35
NDE1-210ENST00000574163 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
NDE1-210ENST00000574163 COL15A1P39059 1388 aa12.84□□□□□ -0.35
NDE1-210ENST00000574163 CCDC184Q52MB2 194 aa12.84□□□□□ -0.35
NDE1-210ENST00000574163 TRAPPC3LQ5T215 181 aa12.84□□□□□ -0.35
NDE1-210ENST00000574163 ARXQ96QS3 562 aa12.84□□□□□ -0.35
NDE1-210ENST00000574163 KIF13BQ9NQT8 1826 aa12.83□□□□□ -0.35
NDE1-210ENST00000574163 KCNQ3O43525 872 aa12.83□□□□□ -0.36
NDE1-210ENST00000574163 SNRPA1P09661 255 aaKnown RBP12.83□□□□□ -0.36
NDE1-210ENST00000574163 THUMPD2Q9BTF0 503 aaKnown RBP12.83□□□□□ -0.36
NDE1-210ENST00000574163 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
NDE1-210ENST00000574163 USP42Q9H9J4 1324 aaKnown RBP12.83□□□□□ -0.36
NDE1-210ENST00000574163 RFC4P35249 363 aa12.82□□□□□ -0.36
NDE1-210ENST00000574163 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
NDE1-210ENST00000574163 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
NDE1-210ENST00000574163 ZBTB1Q9Y2K1 713 aa12.82□□□□□ -0.36
NDE1-210ENST00000574163 RRP7AQ9Y3A4 280 aaKnown RBP12.82□□□□□ -0.36
NDE1-210ENST00000574163 APAF1O14727 1248 aa12.81□□□□□ -0.36
NDE1-210ENST00000574163 CALD1Q05682 793 aaKnown RBP12.81□□□□□ -0.36
NDE1-210ENST00000574163 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
NDE1-210ENST00000574163 TSPYL4Q9UJ04 414 aa12.81□□□□□ -0.36
NDE1-210ENST00000574163 A0A087WZG4 1122 aa12.8□□□□□ -0.36
NDE1-210ENST00000574163 GYS1P13807 737 aa12.8□□□□□ -0.36
NDE1-210ENST00000574163 IL6STP40189 918 aaPredicted RBP12.8□□□□□ -0.36
NDE1-210ENST00000574163 EIF5P55010 431 aaKnown RBP12.8□□□□□ -0.36
NDE1-210ENST00000574163 EIF4A1P60842 406 aaKnown RBP12.8□□□□□ -0.36
NDE1-210ENST00000574163 SMIM5Q71RC9 77 aa12.8□□□□□ -0.36
NDE1-210ENST00000574163 NLGN1Q8N2Q7 840 aa12.8□□□□□ -0.36
NDE1-210ENST00000574163 NRXN2Q9P2S2 1712 aa12.79□□□□□ -0.36
NDE1-210ENST00000574163 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
NDE1-210ENST00000574163 CCDC27Q2M243 656 aa12.79□□□□□ -0.36
NDE1-210ENST00000574163 FHDC1Q9C0D6 1143 aaPredicted RBP12.79□□□□□ -0.36
NDE1-210ENST00000574163 ERBB4Q15303 1308 aa12.79□□□□□ -0.36
NDE1-210ENST00000574163 C10orf71Q711Q0 1435 aa12.79□□□□□ -0.36
NDE1-210ENST00000574163 CHL1O00533 1208 aa12.78□□□□□ -0.36
NDE1-210ENST00000574163 RGL2O15211 777 aa12.78□□□□□ -0.36
NDE1-210ENST00000574163 GIGYF1O75420 1035 aaPredicted RBP12.78□□□□□ -0.36
NDE1-210ENST00000574163 MIS18AQ9NYP9 233 aa12.78□□□□□ -0.36
NDE1-210ENST00000574163 NARFQ9UHQ1 456 aa12.78□□□□□ -0.36
NDE1-210ENST00000574163 KIAA1551Q9HCM1 1747 aa12.77□□□□□ -0.36
NDE1-210ENST00000574163 ZPR1O75312 459 aa12.77□□□□□ -0.37
NDE1-210ENST00000574163 MMP10P09238 476 aa12.77□□□□□ -0.37
NDE1-210ENST00000574163 CANXP27824 592 aaKnown RBP12.77□□□□□ -0.37
NDE1-210ENST00000574163 NGEFQ8N5V2 710 aa12.77□□□□□ -0.37
NDE1-210ENST00000574163 CFAP44Q96MT7 982 aa12.77□□□□□ -0.37
NDE1-210ENST00000574163 SYT17Q9BSW7 474 aa12.77□□□□□ -0.37
NDE1-210ENST00000574163 IFT57Q9NWB7 429 aa12.77□□□□□ -0.37
NDE1-210ENST00000574163 SRP68Q9UHB9 627 aaKnown RBP12.77□□□□□ -0.37
NDE1-210ENST00000574163 USP16Q9Y5T5 823 aa12.77□□□□□ -0.37
NDE1-210ENST00000574163 AFDNP55196 1824 aaKnown RBP12.76□□□□□ -0.37
NDE1-210ENST00000574163 PRAMEF22A3QJZ6 481 aa12.76□□□□□ -0.37
NDE1-210ENST00000574163 CCER2I3L3R5 266 aa12.76□□□□□ -0.37
NDE1-210ENST00000574163 A1BGP04217 495 aa12.76□□□□□ -0.37
NDE1-210ENST00000574163 HOXB7P09629 217 aa12.76□□□□□ -0.37
NDE1-210ENST00000574163 ZNF853P0CG23 659 aa12.76□□□□□ -0.37
NDE1-210ENST00000574163 CD2APQ9Y5K6 639 aa12.76□□□□□ -0.37
NDE1-210ENST00000574163 GNAI1P63096 354 aa12.75□□□□□ -0.37
NDE1-210ENST00000574163 IL16Q14005 1332 aa12.75□□□□□ -0.37
NDE1-210ENST00000574163 FKBP8Q14318 412 aa12.75□□□□□ -0.37
NDE1-210ENST00000574163 NPM2Q86SE8 214 aaKnown RBP12.75□□□□□ -0.37
NDE1-210ENST00000574163 NBPF26B4DH59 902 aa12.74□□□□□ -0.37
NDE1-210ENST00000574163 USPL1Q5W0Q7 1092 aa12.74□□□□□ -0.37
NDE1-210ENST00000574163 NBPF10Q6P3W6 841 aaKnown RBP12.74□□□□□ -0.37
NDE1-210ENST00000574163 NBPF15Q8N660 670 aa12.74□□□□□ -0.37
NDE1-210ENST00000574163 PARP3Q9Y6F1 533 aa12.74□□□□□ -0.37
NDE1-210ENST00000574163 BRCA1P38398 1863 aaKnown RBP12.74□□□□□ -0.37
NDE1-210ENST00000574163 CAMTA2O94983 1202 aa12.73□□□□□ -0.37
NDE1-210ENST00000574163 DZIP3Q86Y13 1208 aaKnown RBP12.73□□□□□ -0.37
NDE1-210ENST00000574163 WWC1Q8IX03 1113 aa12.73□□□□□ -0.37
NDE1-210ENST00000574163 BCL2L12Q9HB09 334 aa12.73□□□□□ -0.37
NDE1-210ENST00000574163 ZNF219Q9P2Y4 722 aaPredicted RBP12.73□□□□□ -0.37
NDE1-210ENST00000574163 DLEC1Q9Y238 1755 aa12.73□□□□□ -0.37
NDE1-210ENST00000574163 PXDNLA1KZ92 1463 aa12.72□□□□□ -0.37
NDE1-210ENST00000574163 CARMIL3Q8ND23 1372 aa12.72□□□□□ -0.37
NDE1-210ENST00000574163 NUP98P52948 1817 aa12.72□□□□□ -0.37
NDE1-210ENST00000574163 POLRMTO00411 1230 aaKnown RBP12.72□□□□□ -0.37
NDE1-210ENST00000574163 TM4SF1P30408 202 aa12.72□□□□□ -0.37
NDE1-210ENST00000574163 DDR1Q08345 913 aa12.72□□□□□ -0.37
NDE1-210ENST00000574163 CLEC4GQ6UXB4 293 aa12.72□□□□□ -0.37
NDE1-210ENST00000574163 MBIPQ9NS73 344 aa12.72□□□□□ -0.37
NDE1-210ENST00000574163 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
NDE1-210ENST00000574163 ZNF330Q9Y3S2 320 aaPredicted RBP12.72□□□□□ -0.37
NDE1-210ENST00000574163 ATP10DQ9P241 1426 aa12.71□□□□□ -0.37
NDE1-210ENST00000574163 ANKRD36CQ5JPF3 1778 aa12.71□□□□□ -0.37
NDE1-210ENST00000574163 NFIXQ14938 502 aa12.71□□□□□ -0.37
NDE1-210ENST00000574163 FAM9BQ8IZU0 186 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms