RNA–Protein interactions for RNA: ENST00000574158.1

POLR2A-203, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 461 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-203ENST00000574158 NFE2L2Q16236 605 aa18.6■□□□□ 0.57
POLR2A-203ENST00000574158 NEFMP07197 916 aa18.59■□□□□ 0.57
POLR2A-203ENST00000574158 NLGN1Q8N2Q7 840 aa18.59■□□□□ 0.57
POLR2A-203ENST00000574158 FMNL2Q96PY5 1086 aa18.59■□□□□ 0.57
POLR2A-203ENST00000574158 BCORQ6W2J9 1755 aa18.59■□□□□ 0.57
POLR2A-203ENST00000574158 BRCA1P38398 1863 aaKnown RBP18.58■□□□□ 0.57
POLR2A-203ENST00000574158 N4BP2Q86UW6 1770 aaPredicted RBP18.58■□□□□ 0.57
POLR2A-203ENST00000574158 MAPK8IP3Q9UPT6 1336 aa18.58■□□□□ 0.57
POLR2A-203ENST00000574158 AFDNP55196 1824 aaKnown RBP18.58■□□□□ 0.56
POLR2A-203ENST00000574158 NRXN2Q9P2S2 1712 aa18.57■□□□□ 0.56
POLR2A-203ENST00000574158 PNNQ9H307 717 aaKnown RBP18.57■□□□□ 0.56
POLR2A-203ENST00000574158 STARD3NLO95772 234 aa18.56■□□□□ 0.56
POLR2A-203ENST00000574158 FKBP8Q14318 412 aa18.56■□□□□ 0.56
POLR2A-203ENST00000574158 PXDNLA1KZ92 1463 aa18.56■□□□□ 0.56
POLR2A-203ENST00000574158 TEX13AQ9BXU3 409 aaPredicted RBP18.55■□□□□ 0.56
POLR2A-203ENST00000574158 YBX3P16989 372 aaKnown RBP eCLIP18.54■□□□□ 0.56
POLR2A-203ENST00000574158 YY1P25490 414 aa18.54■□□□□ 0.56
POLR2A-203ENST00000574158 CANXP27824 592 aaKnown RBP18.54■□□□□ 0.56
POLR2A-203ENST00000574158 EIF5P55010 431 aaKnown RBP18.54■□□□□ 0.56
POLR2A-203ENST00000574158 DDR1Q08345 913 aa18.54■□□□□ 0.56
POLR2A-203ENST00000574158 GPR162Q16538 588 aa18.54■□□□□ 0.56
POLR2A-203ENST00000574158 THUMPD2Q9BTF0 503 aaKnown RBP18.54■□□□□ 0.56
POLR2A-203ENST00000574158 NARFQ9UHQ1 456 aa18.54■□□□□ 0.56
POLR2A-203ENST00000574158 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
POLR2A-203ENST00000574158 USPL1Q5W0Q7 1092 aa18.53■□□□□ 0.56
POLR2A-203ENST00000574158 PRAMEF22A3QJZ6 481 aa18.52■□□□□ 0.56
POLR2A-203ENST00000574158 ZPR1O75312 459 aa18.52■□□□□ 0.56
POLR2A-203ENST00000574158 PELP1Q8IZL8 1130 aaKnown RBP18.52■□□□□ 0.56
POLR2A-203ENST00000574158 BCL2L12Q9HB09 334 aa18.52■□□□□ 0.56
POLR2A-203ENST00000574158 UTRNP46939 3433 aa18.52■□□□□ 0.55
POLR2A-203ENST00000574158 PARP3Q9Y6F1 533 aa18.51■□□□□ 0.55
POLR2A-203ENST00000574158 DLEC1Q9Y238 1755 aa18.5■□□□□ 0.55
POLR2A-203ENST00000574158 ZNF316A6NFI3 1004 aaPredicted RBP18.5■□□□□ 0.55
POLR2A-203ENST00000574158 POLRMTO00411 1230 aaKnown RBP18.5■□□□□ 0.55
POLR2A-203ENST00000574158 A1BGP04217 495 aa18.5■□□□□ 0.55
POLR2A-203ENST00000574158 SNRPA1P09661 255 aaKnown RBP18.5■□□□□ 0.55
POLR2A-203ENST00000574158 IL6STP40189 918 aaPredicted RBP18.5■□□□□ 0.55
POLR2A-203ENST00000574158 TMPOP42166 694 aaKnown RBP18.5■□□□□ 0.55
POLR2A-203ENST00000574158 WDR43Q15061 677 aaKnown RBP eCLIP18.5■□□□□ 0.55
POLR2A-203ENST00000574158 CCDC146Q8IYE0 955 aa18.5■□□□□ 0.55
POLR2A-203ENST00000574158 MIS18AQ9NYP9 233 aa18.5■□□□□ 0.55
POLR2A-203ENST00000574158 USP16Q9Y5T5 823 aa18.5■□□□□ 0.55
POLR2A-203ENST00000574158 GOLGB1Q14789 3259 aaKnown RBP18.5■□□□□ 0.55
POLR2A-203ENST00000574158 ARFGEF1Q9Y6D6 1849 aa18.49■□□□□ 0.55
POLR2A-203ENST00000574158 TM4SF1P30408 202 aa18.49■□□□□ 0.55
POLR2A-203ENST00000574158 PNISRQ8TF01 805 aaKnown RBP18.49■□□□□ 0.55
POLR2A-203ENST00000574158 A0A087WZG4 1122 aa18.48■□□□□ 0.55
POLR2A-203ENST00000574158 RIPK4P57078 832 aa18.48■□□□□ 0.55
POLR2A-203ENST00000574158 NFIXQ14938 502 aa18.48■□□□□ 0.55
POLR2A-203ENST00000574158 ADAMTS8Q9UP79 889 aa18.48■□□□□ 0.55
POLR2A-203ENST00000574158 ANKRD31Q8N7Z5 1873 aa18.48■□□□□ 0.55
POLR2A-203ENST00000574158 RUNDC1Q96C34 613 aa18.47■□□□□ 0.55
POLR2A-203ENST00000574158 RRP7AQ9Y3A4 280 aaKnown RBP18.47■□□□□ 0.55
POLR2A-203ENST00000574158 PIP4K2AP48426 406 aaPredicted RBP18.46■□□□□ 0.55
POLR2A-203ENST00000574158 EIF4A1P60842 406 aaKnown RBP18.46■□□□□ 0.55
POLR2A-203ENST00000574158 TGFB2P61812 414 aa18.46■□□□□ 0.55
POLR2A-203ENST00000574158 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.55
POLR2A-203ENST00000574158 ZNF330Q9Y3S2 320 aaPredicted RBP18.46■□□□□ 0.55
POLR2A-203ENST00000574158 NBPF26B4DH59 902 aa18.45■□□□□ 0.54
POLR2A-203ENST00000574158 GRIN3BO60391 1043 aa18.45■□□□□ 0.54
POLR2A-203ENST00000574158 CAMTA2O94983 1202 aa18.45■□□□□ 0.54
POLR2A-203ENST00000574158 NBPF10Q6P3W6 841 aaKnown RBP18.45■□□□□ 0.54
POLR2A-203ENST00000574158 NBPF15Q8N660 670 aa18.45■□□□□ 0.54
POLR2A-203ENST00000574158 WWC3Q9ULE0 1092 aa18.45■□□□□ 0.54
POLR2A-203ENST00000574158 GIGYF1O75420 1035 aaPredicted RBP18.44■□□□□ 0.54
POLR2A-203ENST00000574158 TBC1D2BQ9UPU7 963 aa18.44■□□□□ 0.54
POLR2A-203ENST00000574158 CARMIL3Q8ND23 1372 aa18.43■□□□□ 0.54
POLR2A-203ENST00000574158 COL11A2P13942 1736 aaPredicted RBP18.43■□□□□ 0.54
POLR2A-203ENST00000574158 A0A0G2JLW4 131 aa18.43■□□□□ 0.54
POLR2A-203ENST00000574158 DPEP1P16444 411 aa18.43■□□□□ 0.54
POLR2A-203ENST00000574158 TRIM35Q9UPQ4 493 aa18.43■□□□□ 0.54
POLR2A-203ENST00000574158 CCDC184Q52MB2 194 aa18.42■□□□□ 0.54
POLR2A-203ENST00000574158 TBC1D9BQ66K14 1250 aa18.42■□□□□ 0.54
POLR2A-203ENST00000574158 DZIP3Q86Y13 1208 aaKnown RBP18.42■□□□□ 0.54
POLR2A-203ENST00000574158 TSPYL4Q9UJ04 414 aa18.42■□□□□ 0.54
POLR2A-203ENST00000574158 NUP98P52948 1817 aa18.42■□□□□ 0.54
POLR2A-203ENST00000574158 SERPINB2P05120 415 aa18.41■□□□□ 0.54
POLR2A-203ENST00000574158 KCNA3P22001 575 aa18.41■□□□□ 0.54
POLR2A-203ENST00000574158 NEUROD2Q15784 382 aa18.41■□□□□ 0.54
POLR2A-203ENST00000574158 BABAM1Q9NWV8 329 aa18.41■□□□□ 0.54
POLR2A-203ENST00000574158 BICDL1Q6ZP65 573 aa18.4■□□□□ 0.54
POLR2A-203ENST00000574158 NPM2Q86SE8 214 aaKnown RBP18.39■□□□□ 0.53
POLR2A-203ENST00000574158 ZNF784Q8NCA9 323 aaPredicted RBP18.39■□□□□ 0.53
POLR2A-203ENST00000574158 ADCY9O60503 1353 aa18.39■□□□□ 0.53
POLR2A-203ENST00000574158 RGL2O15211 777 aa18.37■□□□□ 0.53
POLR2A-203ENST00000574158 CHRNA5P30532 468 aa18.37■□□□□ 0.53
POLR2A-203ENST00000574158 BCS1LQ9Y276 419 aa18.37■□□□□ 0.53
POLR2A-203ENST00000574158 ERBB4Q15303 1308 aa18.37■□□□□ 0.53
POLR2A-203ENST00000574158 CHL1O00533 1208 aa18.36■□□□□ 0.53
POLR2A-203ENST00000574158 CLEC4GQ6UXB4 293 aa18.36■□□□□ 0.53
POLR2A-203ENST00000574158 ARFGEF2Q9Y6D5 1785 aa18.36■□□□□ 0.53
POLR2A-203ENST00000574158 CACNA1SQ13698 1873 aa18.35■□□□□ 0.53
POLR2A-203ENST00000574158 APAF1O14727 1248 aa18.35■□□□□ 0.53
POLR2A-203ENST00000574158 PRR5LQ6MZQ0 368 aa18.35■□□□□ 0.53
POLR2A-203ENST00000574158 PIM2Q9P1W9 311 aa18.35■□□□□ 0.53
POLR2A-203ENST00000574158 ZNF652Q9Y2D9 606 aa18.35■□□□□ 0.53
POLR2A-203ENST00000574158 ANKRD36CQ5JPF3 1778 aa18.35■□□□□ 0.53
POLR2A-203ENST00000574158 ANP32CO43423 234 aa18.34■□□□□ 0.53
POLR2A-203ENST00000574158 LRP10Q7Z4F1 713 aa18.34■□□□□ 0.53
POLR2A-203ENST00000574158 SETDB2Q96T68 719 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms