RNA–Protein interactions for RNA: ENST00000573992.5

EDC4-207, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 1 (best)

Gene EDC4, Length 3,934 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-207ENST00000573992 CAPN2P17655 700 aa13.51□□□□□ -0.25
EDC4-207ENST00000573992 STK3Q13188 491 aa13.51□□□□□ -0.25
EDC4-207ENST00000573992 ANKRD1Q15327 319 aa13.51□□□□□ -0.25
EDC4-207ENST00000573992 ERCC6LQ2NKX8 1250 aa13.51□□□□□ -0.25
EDC4-207ENST00000573992 PPIP5K1Q6PFW1 1433 aa13.51□□□□□ -0.25
EDC4-207ENST00000573992 NUP153P49790 1475 aaKnown RBP13.51□□□□□ -0.25
EDC4-207ENST00000573992 TUBB4AP04350 444 aa13.51□□□□□ -0.25
EDC4-207ENST00000573992 UBTFL1P0CB47 393 aaPredicted RBP13.51□□□□□ -0.25
EDC4-207ENST00000573992 ME1P48163 572 aa13.51□□□□□ -0.25
EDC4-207ENST00000573992 SLC26A8Q96RN1 970 aa13.51□□□□□ -0.25
EDC4-207ENST00000573992 SRRTQ9BXP5 876 aaKnown RBP13.51□□□□□ -0.25
EDC4-207ENST00000573992 SERPINC1P01008 464 aa13.51□□□□□ -0.25
EDC4-207ENST00000573992 ZSCAN12O43309 604 aa13.5□□□□□ -0.25
EDC4-207ENST00000573992 IFIT2P09913 472 aaKnown RBP13.5□□□□□ -0.25
EDC4-207ENST00000573992 CUL4AQ13619 759 aa13.5□□□□□ -0.25
EDC4-207ENST00000573992 FBXO38Q6PIJ6 1188 aa13.5□□□□□ -0.25
EDC4-207ENST00000573992 TMC6Q7Z403 805 aa13.5□□□□□ -0.25
EDC4-207ENST00000573992 TSPYL6Q8N831 410 aa13.5□□□□□ -0.25
EDC4-207ENST00000573992 CCDC34Q96HJ3 373 aa13.5□□□□□ -0.25
EDC4-207ENST00000573992 NPHP3Q7Z494 1330 aa13.5□□□□□ -0.25
EDC4-207ENST00000573992 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
EDC4-207ENST00000573992 PLB1Q6P1J6 1458 aa13.5□□□□□ -0.25
EDC4-207ENST00000573992 HSP90AB4PQ58FF6 505 aa13.5□□□□□ -0.25
EDC4-207ENST00000573992 CEP85Q6P2H3 762 aa13.5□□□□□ -0.25
EDC4-207ENST00000573992 CCDC150Q8NCX0 1101 aa13.5□□□□□ -0.25
EDC4-207ENST00000573992 MBIPQ9NS73 344 aa13.5□□□□□ -0.25
EDC4-207ENST00000573992 NRBP1Q9UHY1 535 aa13.5□□□□□ -0.25
EDC4-207ENST00000573992 ITSN2Q9NZM3 1697 aa13.5□□□□□ -0.25
EDC4-207ENST00000573992 NSD2O96028 1365 aa13.49□□□□□ -0.25
EDC4-207ENST00000573992 ADGRF5Q8IZF2 1346 aa13.49□□□□□ -0.25
EDC4-207ENST00000573992 BLOC1S2Q6QNY1 142 aa13.49□□□□□ -0.25
EDC4-207ENST00000573992 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
EDC4-207ENST00000573992 MEIS3Q99687 375 aa13.49□□□□□ -0.25
EDC4-207ENST00000573992 AK2P54819 239 aa13.49□□□□□ -0.25
EDC4-207ENST00000573992 DDX54Q8TDD1 881 aaKnown RBP13.49□□□□□ -0.25
EDC4-207ENST00000573992 CEP170Q5SW79 1584 aa13.49□□□□□ -0.25
EDC4-207ENST00000573992 KMT5BQ4FZB7 885 aa13.49□□□□□ -0.25
EDC4-207ENST00000573992 JAKMIP3Q5VZ66 844 aa13.49□□□□□ -0.25
EDC4-207ENST00000573992 ZNF396Q96N95 335 aaPredicted RBP13.49□□□□□ -0.25
EDC4-207ENST00000573992 CHMLP26374 656 aa13.48□□□□□ -0.25
EDC4-207ENST00000573992 PRPF40BQ6NWY9 871 aaKnown RBP13.48□□□□□ -0.25
EDC4-207ENST00000573992 NUTM1Q86Y26 1132 aa13.48□□□□□ -0.25
EDC4-207ENST00000573992 DNAAF4Q8WXU2 420 aa13.48□□□□□ -0.25
EDC4-207ENST00000573992 CASQ1P31415 396 aa13.48□□□□□ -0.25
EDC4-207ENST00000573992 DRC1Q96MC2 740 aa13.48□□□□□ -0.25
EDC4-207ENST00000573992 MYCBPQ99417 103 aaPredicted RBP13.48□□□□□ -0.25
EDC4-207ENST00000573992 TSPYL4Q9UJ04 414 aa13.48□□□□□ -0.25
EDC4-207ENST00000573992 MNAT1P51948 309 aa13.48□□□□□ -0.25
EDC4-207ENST00000573992 RAD51AP2Q09MP3 1159 aa13.48□□□□□ -0.25
EDC4-207ENST00000573992 CHMP4CQ96CF2 233 aa13.48□□□□□ -0.25
EDC4-207ENST00000573992 FAM107BQ9H098 131 aa13.48□□□□□ -0.25
EDC4-207ENST00000573992 USP16Q9Y5T5 823 aa13.48□□□□□ -0.25
EDC4-207ENST00000573992 OAS2P29728 719 aaKnown RBP13.47□□□□□ -0.25
EDC4-207ENST00000573992 CLASRPQ8N2M8 674 aaKnown RBP13.47□□□□□ -0.25
EDC4-207ENST00000573992 CACTINQ8WUQ7 758 aaKnown RBP13.47□□□□□ -0.25
EDC4-207ENST00000573992 PHF23Q9BUL5 403 aaPredicted RBP13.47□□□□□ -0.25
EDC4-207ENST00000573992 HDAC5Q9UQL6 1122 aa13.47□□□□□ -0.25
EDC4-207ENST00000573992 ATAD2Q6PL18 1390 aa13.47□□□□□ -0.25
EDC4-207ENST00000573992 ARHGAP5Q13017 1502 aa13.47□□□□□ -0.25
EDC4-207ENST00000573992 CBFA2T2O43439 604 aa13.47□□□□□ -0.25
EDC4-207ENST00000573992 RAB11FIP3O75154 756 aa13.47□□□□□ -0.25
EDC4-207ENST00000573992 MCM6Q14566 821 aa13.47□□□□□ -0.25
EDC4-207ENST00000573992 NECAB1Q8N987 351 aa13.47□□□□□ -0.25
EDC4-207ENST00000573992 KCNF1Q9H3M0 494 aa13.47□□□□□ -0.25
EDC4-207ENST00000573992 SPG7Q9UQ90 795 aa13.47□□□□□ -0.25
EDC4-207ENST00000573992 SHANK2Q9UPX8 1470 aa13.47□□□□□ -0.25
EDC4-207ENST00000573992 AXDND1Q5T1B0 1012 aaPredicted RBP13.46□□□□□ -0.25
EDC4-207ENST00000573992 ZBTB9Q96C00 473 aa13.46□□□□□ -0.25
EDC4-207ENST00000573992 COG3Q96JB2 828 aa13.46□□□□□ -0.25
EDC4-207ENST00000573992 PALD1Q9ULE6 856 aa13.46□□□□□ -0.25
EDC4-207ENST00000573992 PRDM15P57071 1507 aaPredicted RBP13.46□□□□□ -0.25
EDC4-207ENST00000573992 CLGNO14967 610 aa13.46□□□□□ -0.25
EDC4-207ENST00000573992 OLFM4Q6UX06 510 aa13.46□□□□□ -0.25
EDC4-207ENST00000573992 GBP3Q9H0R5 595 aa13.46□□□□□ -0.25
EDC4-207ENST00000573992 CFAP100Q494V2 611 aa13.46□□□□□ -0.26
EDC4-207ENST00000573992 CCDC91Q7Z6B0 441 aa13.46□□□□□ -0.26
EDC4-207ENST00000573992 C8orf58Q8NAV2 365 aa13.46□□□□□ -0.26
EDC4-207ENST00000573992 EVCP57679 992 aa13.45□□□□□ -0.26
EDC4-207ENST00000573992 DCTN1Q14203 1278 aa13.45□□□□□ -0.26
EDC4-207ENST00000573992 CCDC70Q6NSX1 233 aa13.45□□□□□ -0.26
EDC4-207ENST00000573992 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
EDC4-207ENST00000573992 GIMAP7Q8NHV1 300 aa13.45□□□□□ -0.26
EDC4-207ENST00000573992 PTPRGP23470 1445 aa13.45□□□□□ -0.26
EDC4-207ENST00000573992 RAD50Q92878 1312 aa13.45□□□□□ -0.26
EDC4-207ENST00000573992 GNG11P61952 73 aa13.45□□□□□ -0.26
EDC4-207ENST00000573992 SIRT2Q8IXJ6 389 aa13.45□□□□□ -0.26
EDC4-207ENST00000573992 VPS18Q9P253 973 aa13.45□□□□□ -0.26
EDC4-207ENST00000573992 SMC1AQ14683 1233 aaKnown RBP13.45□□□□□ -0.26
EDC4-207ENST00000573992 STK38Q15208 465 aa13.45□□□□□ -0.26
EDC4-207ENST00000573992 SYNE3Q6ZMZ3 975 aa13.45□□□□□ -0.26
EDC4-207ENST00000573992 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.45□□□□□ -0.261e-6■■□□□ 11.6
EDC4-207ENST00000573992 SYNMO15061 1565 aa13.44□□□□□ -0.26
EDC4-207ENST00000573992 TTLL5Q6EMB2 1281 aa13.44□□□□□ -0.26
EDC4-207ENST00000573992 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
EDC4-207ENST00000573992 F6X3S4 739 aa13.44□□□□□ -0.26
EDC4-207ENST00000573992 TMEM87AQ8NBN3 555 aa13.44□□□□□ -0.26
EDC4-207ENST00000573992 NOC3LQ8WTT2 800 aaKnown RBP13.44□□□□□ -0.26
EDC4-207ENST00000573992 DDX11Q96FC9 970 aa13.44□□□□□ -0.26
EDC4-207ENST00000573992 ELP1O95163 1332 aa13.44□□□□□ -0.26
EDC4-207ENST00000573992 PTPRCP08575 1304 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms