RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 GAS2L1Q99501 681 aaPredicted RBP9.24□□□□□ -0.93
CDC27-215ENST00000573550 CABP1Q9NZU7 370 aa9.24□□□□□ -0.93
CDC27-215ENST00000573550 F11P03951 625 aa9.23□□□□□ -0.93
CDC27-215ENST00000573550 ATP4AP20648 1035 aa9.23□□□□□ -0.93
CDC27-215ENST00000573550 TEAD4Q15561 434 aa9.23□□□□□ -0.93
CDC27-215ENST00000573550 POTEAQ6S8J7 498 aa9.23□□□□□ -0.93
CDC27-215ENST00000573550 FAM200AQ8TCP9 573 aa9.23□□□□□ -0.93
CDC27-215ENST00000573550 STK32AQ8WU08 396 aa9.23□□□□□ -0.93
CDC27-215ENST00000573550 GPAMQ9HCL2 828 aa9.23□□□□□ -0.93
CDC27-215ENST00000573550 THBS1P07996 1170 aa9.22□□□□□ -0.93
CDC27-215ENST00000573550 MSX1P28360 303 aa9.22□□□□□ -0.93
CDC27-215ENST00000573550 DBN1Q16643 649 aa9.22□□□□□ -0.93
CDC27-215ENST00000573550 TRIM22Q8IYM9 498 aa9.22□□□□□ -0.93
CDC27-215ENST00000573550 ZNF837Q96EG3 531 aaPredicted RBP9.22□□□□□ -0.93
CDC27-215ENST00000573550 PARP3Q9Y6F1 533 aa9.22□□□□□ -0.93
CDC27-215ENST00000573550 LGR5O75473 907 aa9.21□□□□□ -0.94
CDC27-215ENST00000573550 PSMA6P60900 246 aaKnown RBP9.21□□□□□ -0.94
CDC27-215ENST00000573550 FAM69CQ0P6D2 419 aa9.21□□□□□ -0.94
CDC27-215ENST00000573550 SH3PXD2AQ5TCZ1 1133 aa9.21□□□□□ -0.94
CDC27-215ENST00000573550 RIPOR1Q6ZS17 1223 aa9.21□□□□□ -0.94
CDC27-215ENST00000573550 L3MBTL2Q969R5 705 aa9.21□□□□□ -0.94
CDC27-215ENST00000573550 ZDHHC3Q9NYG2 299 aa9.21□□□□□ -0.94
CDC27-215ENST00000573550 CDC14CA4D256 554 aa9.2□□□□□ -0.94
CDC27-215ENST00000573550 EML1O00423 815 aa9.2□□□□□ -0.94
CDC27-215ENST00000573550 NOS2P35228 1153 aa9.2□□□□□ -0.94
CDC27-215ENST00000573550 VWA5B2Q8N398 1253 aa9.2□□□□□ -0.94
CDC27-215ENST00000573550 GPR161Q8N6U8 529 aaKnown RBP9.2□□□□□ -0.94
CDC27-215ENST00000573550 GMCL1Q96IK5 515 aa9.2□□□□□ -0.94
CDC27-215ENST00000573550 HINFPQ9BQA5 517 aa9.2□□□□□ -0.94
CDC27-215ENST00000573550 CRISPLD1Q9H336 500 aa9.2□□□□□ -0.94
CDC27-215ENST00000573550 ACIN1Q9UKV3 1341 aaKnown RBP9.2□□□□□ -0.94
CDC27-215ENST00000573550 PPP1R15AO75807 674 aaPredicted RBP9.19□□□□□ -0.94
CDC27-215ENST00000573550 GMPRP36959 345 aa9.19□□□□□ -0.94
CDC27-215ENST00000573550 TXLNAP40222 546 aa9.19□□□□□ -0.94
CDC27-215ENST00000573550 HIRAP54198 1017 aaPredicted RBP9.19□□□□□ -0.94
CDC27-215ENST00000573550 SWI5Q1ZZU3 235 aa9.19□□□□□ -0.94
CDC27-215ENST00000573550 NBPF1Q3BBV0 1214 aa9.19□□□□□ -0.94
CDC27-215ENST00000573550 TMEM164Q5U3C3 297 aa9.19□□□□□ -0.94
CDC27-215ENST00000573550 SV2AQ7L0J3 742 aa9.19□□□□□ -0.94
CDC27-215ENST00000573550 C1orf216Q8TAB5 229 aa9.19□□□□□ -0.94
CDC27-215ENST00000573550 SCG3Q8WXD2 468 aaKnown RBP9.19□□□□□ -0.94
CDC27-215ENST00000573550 AIDAQ96BJ3 306 aa9.19□□□□□ -0.94
CDC27-215ENST00000573550 RUBCNLQ9H714 662 aa9.19□□□□□ -0.94
CDC27-215ENST00000573550 ATAD2Q6PL18 1390 aa9.19□□□□□ -0.94
CDC27-215ENST00000573550 SERTM1A2A2V5 107 aa9.18□□□□□ -0.94
CDC27-215ENST00000573550 H7C1W4 665 aa9.18□□□□□ -0.94
CDC27-215ENST00000573550 WEE1P30291 646 aa9.18□□□□□ -0.94
CDC27-215ENST00000573550 STAG2Q8N3U4 1231 aa9.18□□□□□ -0.94
CDC27-215ENST00000573550 GAS2L2Q8NHY3 880 aa9.18□□□□□ -0.94
CDC27-215ENST00000573550 ARID3AQ99856 593 aa9.18□□□□□ -0.94
CDC27-215ENST00000573550 WIPF1O43516 503 aa9.17□□□□□ -0.94
CDC27-215ENST00000573550 PPP1R12BO60237 982 aaPredicted RBP9.17□□□□□ -0.94
CDC27-215ENST00000573550 IGFBP4P22692 258 aa9.17□□□□□ -0.94
CDC27-215ENST00000573550 UBAP2LQ14157 1087 aaKnown RBP9.17□□□□□ -0.94
CDC27-215ENST00000573550 C2orf49Q9BVC5 232 aaPredicted RBP9.17□□□□□ -0.94
CDC27-215ENST00000573550 NUCKS1Q9H1E3 243 aaKnown RBP9.17□□□□□ -0.94
CDC27-215ENST00000573550 ZNF232Q9UNY5 417 aa9.17□□□□□ -0.94
CDC27-215ENST00000573550 KRT76Q01546 638 aa9.16□□□□□ -0.94
CDC27-215ENST00000573550 LBRQ14739 615 aaKnown RBP9.16□□□□□ -0.94
CDC27-215ENST00000573550 CSB-PGBD3P0DP91 1061 aa9.15□□□□□ -0.94
CDC27-215ENST00000573550 TATP17735 454 aaPredicted RBP9.15□□□□□ -0.94
CDC27-215ENST00000573550 PGBD3Q8N328 593 aa9.15□□□□□ -0.94
CDC27-215ENST00000573550 C7orf43Q8WVR3 580 aa9.15□□□□□ -0.94
CDC27-215ENST00000573550 GTPBP3Q969Y2 492 aaKnown RBP9.15□□□□□ -0.94
CDC27-215ENST00000573550 CHMP3Q9Y3E7 222 aa9.15□□□□□ -0.94
CDC27-215ENST00000573550 GPR25O00155 361 aa9.14□□□□□ -0.95
CDC27-215ENST00000573550 OCLNQ16625 522 aa9.14□□□□□ -0.95
CDC27-215ENST00000573550 RNFT1Q5M7Z0 435 aa9.14□□□□□ -0.95
CDC27-215ENST00000573550 CHMP7Q8WUX9 453 aaPredicted RBP9.14□□□□□ -0.95
CDC27-215ENST00000573550 ZIC5Q96T25 663 aa9.14□□□□□ -0.95
CDC27-215ENST00000573550 COL25A1Q9BXS0 654 aaPredicted RBP9.14□□□□□ -0.95
CDC27-215ENST00000573550 A0A1W2PNR3 127 aa9.13□□□□□ -0.95
CDC27-215ENST00000573550 GAS6Q14393 721 aa9.13□□□□□ -0.95
CDC27-215ENST00000573550 ARSJQ5FYB0 599 aaPredicted RBP9.13□□□□□ -0.95
CDC27-215ENST00000573550 EFHC2Q5JST6 749 aa9.13□□□□□ -0.95
CDC27-215ENST00000573550 C1orf53Q5VUE5 145 aa9.13□□□□□ -0.95
CDC27-215ENST00000573550 KLRG1Q96E93 195 aa9.13□□□□□ -0.95
CDC27-215ENST00000573550 SLAIN2Q9P270 581 aa9.13□□□□□ -0.95
CDC27-215ENST00000573550 HCN4Q9Y3Q4 1203 aa9.13□□□□□ -0.95
CDC27-215ENST00000573550 FOXO3O43524 673 aa9.12□□□□□ -0.95
CDC27-215ENST00000573550 NLRP8Q86W28 1048 aa9.12□□□□□ -0.95
CDC27-215ENST00000573550 CLP1Q92989 425 aaKnown RBP9.12□□□□□ -0.95
CDC27-215ENST00000573550 PRIMPOLQ96LW4 560 aa9.12□□□□□ -0.95
CDC27-215ENST00000573550 PHACTR1Q9C0D0 580 aa9.12□□□□□ -0.95
CDC27-215ENST00000573550 TMEM88BA6NKF7 163 aa9.11□□□□□ -0.95
CDC27-215ENST00000573550 PRMT3O60678 531 aa9.11□□□□□ -0.95
CDC27-215ENST00000573550 ALDH16A1Q8IZ83 802 aa9.11□□□□□ -0.95
CDC27-215ENST00000573550 NDFIP2Q9NV92 336 aa9.11□□□□□ -0.95
CDC27-215ENST00000573550 GPC6Q9Y625 555 aaPredicted RBP9.11□□□□□ -0.95
CDC27-215ENST00000573550 FKBP5Q13451 457 aaPredicted RBP9.1□□□□□ -0.95
CDC27-215ENST00000573550 FOXR1Q6PIV2 292 aa9.1□□□□□ -0.95
CDC27-215ENST00000573550 BICDL1Q6ZP65 573 aa9.1□□□□□ -0.95
CDC27-215ENST00000573550 RHPN1Q8TCX5 695 aa9.1□□□□□ -0.95
CDC27-215ENST00000573550 CNTNAP3BQ96NU0 1288 aa9.09□□□□□ -0.95
CDC27-215ENST00000573550 TRERF1Q96PN7 1200 aa9.09□□□□□ -0.95
CDC27-215ENST00000573550 CNTNAP3Q9BZ76 1288 aa9.09□□□□□ -0.95
CDC27-215ENST00000573550 ZCCHC2Q9C0B9 1178 aaKnown RBP9.09□□□□□ -0.95
CDC27-215ENST00000573550 CXXC1Q9P0U4 656 aaPredicted RBP9.09□□□□□ -0.95
CDC27-215ENST00000573550 BNIP3LO60238 219 aa9.08□□□□□ -0.96
CDC27-215ENST00000573550 FIGNL1Q6PIW4 674 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms