RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 HDGFL1Q5TGJ6 251 aa17.42■□□□□ 0.38
LINC01996-201ENST00000573270 DEFB132Q7Z7B7 95 aa17.42■□□□□ 0.38
LINC01996-201ENST00000573270 LINC00116Q8NCU8 138 aa17.42■□□□□ 0.38
LINC01996-201ENST00000573270 QSER1Q2KHR3 1735 aa17.41■□□□□ 0.38
LINC01996-201ENST00000573270 CACNA1FO60840 1977 aa17.41■□□□□ 0.38
LINC01996-201ENST00000573270 TCERG1O14776 1098 aaKnown RBP17.41■□□□□ 0.38
LINC01996-201ENST00000573270 PLSCR1O15162 318 aa17.41■□□□□ 0.38
LINC01996-201ENST00000573270 EIF2S2P20042 333 aaKnown RBP17.41■□□□□ 0.38
LINC01996-201ENST00000573270 BAG6P46379 1132 aa17.41■□□□□ 0.38
LINC01996-201ENST00000573270 EN1Q05925 392 aaPredicted RBP17.41■□□□□ 0.38
LINC01996-201ENST00000573270 TXNRD1Q16881 649 aa17.41■□□□□ 0.38
LINC01996-201ENST00000573270 LRRC4BQ9NT99 713 aa17.41■□□□□ 0.38
LINC01996-201ENST00000573270 USP16Q9Y5T5 823 aa17.41■□□□□ 0.38
LINC01996-201ENST00000573270 SOS1Q07889 1333 aaPredicted RBP17.41■□□□□ 0.38
LINC01996-201ENST00000573270 ARFGEF2Q9Y6D5 1785 aa17.4■□□□□ 0.38
LINC01996-201ENST00000573270 VAMP4O75379 141 aa17.4■□□□□ 0.38
LINC01996-201ENST00000573270 PIP4K2AP48426 406 aaPredicted RBP17.4■□□□□ 0.38
LINC01996-201ENST00000573270 EZH2Q15910 746 aaKnown RBP17.4■□□□□ 0.38
LINC01996-201ENST00000573270 BCL2L13Q9BXK5 485 aa17.4■□□□□ 0.38
LINC01996-201ENST00000573270 N4BP2Q86UW6 1770 aaPredicted RBP17.39■□□□□ 0.37
LINC01996-201ENST00000573270 CYP19A1P11511 503 aaPredicted RBP17.39■□□□□ 0.37
LINC01996-201ENST00000573270 SLC27A3Q5K4L6 730 aa17.39■□□□□ 0.37
LINC01996-201ENST00000573270 CHPF2Q9P2E5 772 aa17.39■□□□□ 0.37
LINC01996-201ENST00000573270 CT47B1P0C2W7 299 aaPredicted RBP17.38■□□□□ 0.37
LINC01996-201ENST00000573270 PROM2Q8N271 834 aa17.38■□□□□ 0.37
LINC01996-201ENST00000573270 CAMKK2Q96RR4 588 aa17.38■□□□□ 0.37
LINC01996-201ENST00000573270 ZBTB1Q9Y2K1 713 aa17.38■□□□□ 0.37
LINC01996-201ENST00000573270 CNTNAP4Q9C0A0 1308 aa17.38■□□□□ 0.37
LINC01996-201ENST00000573270 ANXA1P04083 346 aa17.37■□□□□ 0.37
LINC01996-201ENST00000573270 CRKLP46109 303 aaKnown RBP17.37■□□□□ 0.37
LINC01996-201ENST00000573270 PROSER3Q2NL68 480 aa17.37■□□□□ 0.37
LINC01996-201ENST00000573270 A1BGP04217 495 aa17.36■□□□□ 0.37
LINC01996-201ENST00000573270 CCDC30Q5VVM6 783 aa17.36■□□□□ 0.37
LINC01996-201ENST00000573270 TEX13AQ9BXU3 409 aaPredicted RBP17.36■□□□□ 0.37
LINC01996-201ENST00000573270 SMC4Q9NTJ3 1288 aa17.36■□□□□ 0.37
LINC01996-201ENST00000573270 CCDC87Q9NVE4 849 aa17.36■□□□□ 0.37
LINC01996-201ENST00000573270 ANKRD36CQ5JPF3 1778 aa17.35■□□□□ 0.37
LINC01996-201ENST00000573270 STARD3NLO95772 234 aa17.35■□□□□ 0.37
LINC01996-201ENST00000573270 MYL6BP14649 208 aa17.35■□□□□ 0.37
LINC01996-201ENST00000573270 RARSP54136 660 aaKnown RBP17.35■□□□□ 0.37
LINC01996-201ENST00000573270 SSH1Q8WYL5 1049 aa17.35■□□□□ 0.37
LINC01996-201ENST00000573270 STK31Q9BXU1 1019 aa17.35■□□□□ 0.37
LINC01996-201ENST00000573270 RCAN3Q9UKA8 241 aa17.35■□□□□ 0.37
LINC01996-201ENST00000573270 ERBB4Q15303 1308 aa17.35■□□□□ 0.37
LINC01996-201ENST00000573270 NBPF26B4DH59 902 aa17.34■□□□□ 0.37
LINC01996-201ENST00000573270 COL15A1P39059 1388 aa17.34■□□□□ 0.37
LINC01996-201ENST00000573270 ZNF827Q17R98 1081 aa17.34■□□□□ 0.37
LINC01996-201ENST00000573270 NBPF14Q5TI25 921 aa17.34■□□□□ 0.37
LINC01996-201ENST00000573270 NBPF10Q6P3W6 841 aaKnown RBP17.34■□□□□ 0.37
LINC01996-201ENST00000573270 NBPF15Q8N660 670 aa17.34■□□□□ 0.37
LINC01996-201ENST00000573270 ANO8Q9HCE9 1232 aaPredicted RBP17.34■□□□□ 0.37
LINC01996-201ENST00000573270 ZNF330Q9Y3S2 320 aaPredicted RBP17.34■□□□□ 0.37
LINC01996-201ENST00000573270 GNPATO15228 680 aa17.33■□□□□ 0.36
LINC01996-201ENST00000573270 CANXP27824 592 aaKnown RBP17.33■□□□□ 0.36
LINC01996-201ENST00000573270 PDIA6Q15084 440 aa17.33■□□□□ 0.36
LINC01996-201ENST00000573270 INTS5Q6P9B9 1019 aaKnown RBP17.33■□□□□ 0.36
LINC01996-201ENST00000573270 ZNF428Q96B54 188 aa17.33■□□□□ 0.36
LINC01996-201ENST00000573270 AK7Q96M32 723 aa17.33■□□□□ 0.36
LINC01996-201ENST00000573270 BCAR3O75815 825 aa17.32■□□□□ 0.36
LINC01996-201ENST00000573270 ALDH1L2Q3SY69 923 aa17.32■□□□□ 0.36
LINC01996-201ENST00000573270 MRPL50Q8N5N7 158 aaKnown RBP17.32■□□□□ 0.36
LINC01996-201ENST00000573270 DDX21Q9NR30 783 aaKnown RBP eCLIP17.32■□□□□ 0.36
LINC01996-201ENST00000573270 DBF4Q9UBU7 674 aaPredicted RBP17.32■□□□□ 0.36
LINC01996-201ENST00000573270 AFDNP55196 1824 aaKnown RBP17.32■□□□□ 0.36
LINC01996-201ENST00000573270 SMIM5Q71RC9 77 aa17.31■□□□□ 0.36
LINC01996-201ENST00000573270 G2E3Q7L622 706 aa17.31■□□□□ 0.36
LINC01996-201ENST00000573270 LRP10Q7Z4F1 713 aa17.31■□□□□ 0.36
LINC01996-201ENST00000573270 AMIGO3Q86WK7 504 aa17.31■□□□□ 0.36
LINC01996-201ENST00000573270 CASZ1Q86V15 1759 aa17.3■□□□□ 0.36
LINC01996-201ENST00000573270 KIF16BQ96L93 1317 aa17.3■□□□□ 0.36
LINC01996-201ENST00000573270 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
LINC01996-201ENST00000573270 AKT1S1Q96B36 256 aa17.3■□□□□ 0.36
LINC01996-201ENST00000573270 PHAXQ9H814 394 aaKnown RBP17.3■□□□□ 0.36
LINC01996-201ENST00000573270 NUP98P52948 1817 aa17.29■□□□□ 0.36
LINC01996-201ENST00000573270 PHF14O94880 888 aa17.29■□□□□ 0.36
LINC01996-201ENST00000573270 RC3H1Q5TC82 1133 aaKnown RBP17.29■□□□□ 0.36
LINC01996-201ENST00000573270 CHMP4AQ9BY43 222 aa17.29■□□□□ 0.36
LINC01996-201ENST00000573270 FLIIQ13045 1269 aa17.28■□□□□ 0.36
LINC01996-201ENST00000573270 XAGE3Q8WTP9 111 aa17.28■□□□□ 0.36
LINC01996-201ENST00000573270 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
LINC01996-201ENST00000573270 COL24A1Q17RW2 1714 aa17.27■□□□□ 0.36
LINC01996-201ENST00000573270 PXDNLA1KZ92 1463 aa17.27■□□□□ 0.36
LINC01996-201ENST00000573270 IL6STP40189 918 aaPredicted RBP17.27■□□□□ 0.36
LINC01996-201ENST00000573270 AIMP1Q12904 312 aaKnown RBP17.27■□□□□ 0.36
LINC01996-201ENST00000573270 FRAT1Q92837 279 aaPredicted RBP17.27■□□□□ 0.36
LINC01996-201ENST00000573270 ADCY9O60503 1353 aa17.27■□□□□ 0.35
LINC01996-201ENST00000573270 RPS6KA4O75676 772 aa17.26■□□□□ 0.35
LINC01996-201ENST00000573270 EIF5P55010 431 aaKnown RBP17.26■□□□□ 0.35
LINC01996-201ENST00000573270 TTLL7Q6ZT98 887 aa17.26■□□□□ 0.35
LINC01996-201ENST00000573270 STK32BQ9NY57 414 aa17.26■□□□□ 0.35
LINC01996-201ENST00000573270 RTCBQ9Y3I0 505 aaKnown RBP17.26■□□□□ 0.35
LINC01996-201ENST00000573270 FKBP5Q13451 457 aaPredicted RBP17.25■□□□□ 0.35
LINC01996-201ENST00000573270 COPS6Q7L5N1 327 aa17.25■□□□□ 0.35
LINC01996-201ENST00000573270 NOB1Q9ULX3 412 aaKnown RBP17.25■□□□□ 0.35
LINC01996-201ENST00000573270 TNNQ9UQP3 1299 aa17.25■□□□□ 0.35
LINC01996-201ENST00000573270 PNPLA7Q6ZV29 1317 aa17.24■□□□□ 0.35
LINC01996-201ENST00000573270 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.24■□□□□ 0.35
LINC01996-201ENST00000573270 SSFA2P28290 1259 aa17.24■□□□□ 0.35
LINC01996-201ENST00000573270 BRPF1P55201 1214 aaPredicted RBP17.24■□□□□ 0.35
LINC01996-201ENST00000573270 RRP1P56182 461 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms