RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 FCHSD1Q86WN1 690 aa7.96□□□□□ -1.14
ERCC4-204ENST00000573018 PHTF2Q8N3S3 785 aa7.96□□□□□ -1.14
ERCC4-204ENST00000573018 PSMG3-AS1Q96PY0 264 aa7.96□□□□□ -1.14
ERCC4-204ENST00000573018 APBB1O00213 710 aa7.95□□□□□ -1.14
ERCC4-204ENST00000573018 SOCS7O14512 581 aa7.95□□□□□ -1.14
ERCC4-204ENST00000573018 KHNYNO15037 678 aaKnown RBP7.95□□□□□ -1.14
ERCC4-204ENST00000573018 MAPTP10636 758 aaKnown RBP7.95□□□□□ -1.14
ERCC4-204ENST00000573018 ADH6P28332 368 aa7.95□□□□□ -1.14
ERCC4-204ENST00000573018 SCNN1DP51172 638 aa7.95□□□□□ -1.14
ERCC4-204ENST00000573018 GDF10P55107 478 aa7.95□□□□□ -1.14
ERCC4-204ENST00000573018 ARSJQ5FYB0 599 aaPredicted RBP7.95□□□□□ -1.14
ERCC4-204ENST00000573018 NLRP8Q86W28 1048 aa7.95□□□□□ -1.14
ERCC4-204ENST00000573018 TBC1D2BQ9UPU7 963 aa7.95□□□□□ -1.14
ERCC4-204ENST00000573018 A0A1W2PNR3 127 aa7.94□□□□□ -1.14
ERCC4-204ENST00000573018 INHAP05111 366 aa7.94□□□□□ -1.14
ERCC4-204ENST00000573018 PCBP4P57723 403 aaKnown RBP7.94□□□□□ -1.14
ERCC4-204ENST00000573018 EIF4G2P78344 907 aaKnown RBP eCLIP7.94□□□□□ -1.14
ERCC4-204ENST00000573018 TRIM11Q96F44 468 aa7.94□□□□□ -1.14
ERCC4-204ENST00000573018 NIFKQ9BYG3 293 aaKnown RBP7.94□□□□□ -1.14
ERCC4-204ENST00000573018 TNP2Q05952 138 aa7.93□□□□□ -1.14
ERCC4-204ENST00000573018 C1orf216Q8TAB5 229 aa7.93□□□□□ -1.14
ERCC4-204ENST00000573018 PLVAPQ9BX97 442 aa7.93□□□□□ -1.14
ERCC4-204ENST00000573018 SERTAD1Q9UHV2 236 aa7.93□□□□□ -1.14
ERCC4-204ENST00000573018 GATA4P43694 442 aa7.92□□□□□ -1.14
ERCC4-204ENST00000573018 ZMYM1Q5SVZ6 1142 aa7.92□□□□□ -1.14
ERCC4-204ENST00000573018 SMTNP53814 917 aa7.91□□□□□ -1.14
ERCC4-204ENST00000573018 FAM182BQ5T319 152 aa7.91□□□□□ -1.14
ERCC4-204ENST00000573018 SIRT1Q96EB6 747 aa7.91□□□□□ -1.14
ERCC4-204ENST00000573018 PRR12Q9ULL5 1215 aa7.91□□□□□ -1.14
ERCC4-204ENST00000573018 VAC14Q08AM6 782 aa7.9□□□□□ -1.14
ERCC4-204ENST00000573018 IRF5Q13568 498 aa7.9□□□□□ -1.14
ERCC4-204ENST00000573018 NBPF1Q3BBV0 1214 aa7.9□□□□□ -1.14
ERCC4-204ENST00000573018 GJA3Q9Y6H8 435 aa7.9□□□□□ -1.14
ERCC4-204ENST00000573018 USP3Q9Y6I4 520 aa7.9□□□□□ -1.14
ERCC4-204ENST00000573018 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.89□□□□□ -1.15
ERCC4-204ENST00000573018 TATP17735 454 aaPredicted RBP7.89□□□□□ -1.15
ERCC4-204ENST00000573018 ZNF468Q5VIY5 522 aaPredicted RBP7.89□□□□□ -1.15
ERCC4-204ENST00000573018 ZIC5Q96T25 663 aa7.89□□□□□ -1.15
ERCC4-204ENST00000573018 AVENQ9NQS1 362 aaPredicted RBP7.89□□□□□ -1.15
ERCC4-204ENST00000573018 STRN4Q9NRL3 753 aa7.89□□□□□ -1.15
ERCC4-204ENST00000573018 SPATA31C1P0DKV0 1188 aa7.88□□□□□ -1.15
ERCC4-204ENST00000573018 KRTAP9-2Q9BYQ4 174 aa7.88□□□□□ -1.15
ERCC4-204ENST00000573018 CABP1Q9NZU7 370 aa7.88□□□□□ -1.15
ERCC4-204ENST00000573018 CHIC2Q9UKJ5 165 aa7.88□□□□□ -1.15
ERCC4-204ENST00000573018 PARP3Q9Y6F1 533 aa7.88□□□□□ -1.15
ERCC4-204ENST00000573018 FAM157BP0CG42 384 aa7.87□□□□□ -1.15
ERCC4-204ENST00000573018 BICDL1Q6ZP65 573 aa7.87□□□□□ -1.15
ERCC4-204ENST00000573018 ZNF295-AS1Q8N0V1 137 aa7.87□□□□□ -1.15
ERCC4-204ENST00000573018 BCANQ96GW7 911 aa7.87□□□□□ -1.15
ERCC4-204ENST00000573018 MARK1Q9P0L2 795 aa7.87□□□□□ -1.15
ERCC4-204ENST00000573018 SCO2A0A1W2PP80 73 aa7.86□□□□□ -1.15
ERCC4-204ENST00000573018 TMEM229AB2RXF0 380 aa7.86□□□□□ -1.15
ERCC4-204ENST00000573018 RSPO4Q2I0M5 234 aaPredicted RBP7.86□□□□□ -1.15
ERCC4-204ENST00000573018 PLPP7Q8NBV4 271 aa7.86□□□□□ -1.15
ERCC4-204ENST00000573018 IQSEC3Q9UPP2 1182 aaPredicted RBP7.86□□□□□ -1.15
ERCC4-204ENST00000573018 KRTAP9-6A0A140TA67 174 aa7.85□□□□□ -1.15
ERCC4-204ENST00000573018 A6NJY4 79 aa7.85□□□□□ -1.15
ERCC4-204ENST00000573018 FAM229AH3BQW9 127 aa7.85□□□□□ -1.15
ERCC4-204ENST00000573018 BRPF1P55201 1214 aaPredicted RBP7.85□□□□□ -1.15
ERCC4-204ENST00000573018 SYT9Q86SS6 491 aa7.85□□□□□ -1.15
ERCC4-204ENST00000573018 ZDHHC3Q9NYG2 299 aa7.85□□□□□ -1.15
ERCC4-204ENST00000573018 ELOA3CA0A087WX78 387 aaPredicted RBP7.84□□□□□ -1.15
ERCC4-204ENST00000573018 ELOA3DA6NLF2 546 aaPredicted RBP7.84□□□□□ -1.15
ERCC4-204ENST00000573018 CDK2AP1O14519 115 aa7.84□□□□□ -1.15
ERCC4-204ENST00000573018 TXLNAP40222 546 aa7.84□□□□□ -1.15
ERCC4-204ENST00000573018 MTFR1Q15390 333 aa7.84□□□□□ -1.15
ERCC4-204ENST00000573018 ELOA3BQ3SY89 546 aa7.84□□□□□ -1.15
ERCC4-204ENST00000573018 FOXD4L6Q3SYB3 417 aaPredicted RBP7.84□□□□□ -1.15
ERCC4-204ENST00000573018 FOXD4L3Q6VB84 417 aaPredicted RBP7.84□□□□□ -1.15
ERCC4-204ENST00000573018 ELOA3Q8NG57 546 aa7.84□□□□□ -1.15
ERCC4-204ENST00000573018 PRM3Q9NNZ6 103 aa7.84□□□□□ -1.15
ERCC4-204ENST00000573018 TPSG1Q9NRR2 321 aa7.84□□□□□ -1.15
ERCC4-204ENST00000573018 EFSO43281 561 aa7.83□□□□□ -1.16
ERCC4-204ENST00000573018 ALAS2P22557 587 aa7.83□□□□□ -1.16
ERCC4-204ENST00000573018 MAP7D1Q3KQU3 841 aa7.83□□□□□ -1.16
ERCC4-204ENST00000573018 PRRT3Q5FWE3 981 aa7.83□□□□□ -1.16
ERCC4-204ENST00000573018 SLC4A9Q96Q91 983 aa7.83□□□□□ -1.16
ERCC4-204ENST00000573018 NKAPLQ5M9Q1 402 aa7.82□□□□□ -1.16
ERCC4-204ENST00000573018 SAMD5Q5TGI4 173 aa7.82□□□□□ -1.16
ERCC4-204ENST00000573018 SPDYE3A6NKU9 549 aa7.81□□□□□ -1.16
ERCC4-204ENST00000573018 M0R082 166 aa7.81□□□□□ -1.16
ERCC4-204ENST00000573018 APBA3O96018 575 aa7.81□□□□□ -1.16
ERCC4-204ENST00000573018 ABL2P42684 1182 aa7.81□□□□□ -1.16
ERCC4-204ENST00000573018 LRRC69Q6ZNQ3 347 aa7.81□□□□□ -1.16
ERCC4-204ENST00000573018 C8orf86Q6ZUL3 223 aa7.81□□□□□ -1.16
ERCC4-204ENST00000573018 ZNF417Q8TAU3 575 aa7.81□□□□□ -1.16
ERCC4-204ENST00000573018 ZNF587Q96SQ5 575 aaPredicted RBP7.81□□□□□ -1.16
ERCC4-204ENST00000573018 GDPD2Q9HCC8 539 aa7.81□□□□□ -1.16
ERCC4-204ENST00000573018 SEMA3FQ13275 785 aa7.8□□□□□ -1.16
ERCC4-204ENST00000573018 LAMC2Q13753 1193 aa7.8□□□□□ -1.16
ERCC4-204ENST00000573018 ZDHHC1Q8WTX9 485 aa7.8□□□□□ -1.16
ERCC4-204ENST00000573018 PIK3CDO00329 1044 aa7.79□□□□□ -1.16
ERCC4-204ENST00000573018 DYRK3O43781 588 aa7.79□□□□□ -1.16
ERCC4-204ENST00000573018 SFSWAPQ12872 951 aaKnown RBP7.79□□□□□ -1.16
ERCC4-204ENST00000573018 SLC30A3Q99726 388 aa7.79□□□□□ -1.16
ERCC4-204ENST00000573018 MDFIQ99750 246 aa7.79□□□□□ -1.16
ERCC4-204ENST00000573018 PCDHGA11Q9Y5H2 935 aa7.79□□□□□ -1.16
ERCC4-204ENST00000573018 COL9A3Q14050 684 aaPredicted RBP7.78□□□□□ -1.16
ERCC4-204ENST00000573018 GRIK4Q16099 956 aa7.78□□□□□ -1.16
ERCC4-204ENST00000573018 TBCELQ5QJ74 424 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms