RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 PPFIA4O75335 1185 aa11.08□□□□□ -0.64
TVP23A-205ENST00000572428 HOXC9P31274 260 aa11.08□□□□□ -0.64
TVP23A-205ENST00000572428 DMTNQ08495 405 aa11.08□□□□□ -0.64
TVP23A-205ENST00000572428 IP6K1Q92551 441 aa11.08□□□□□ -0.64
TVP23A-205ENST00000572428 FAM117AQ9C073 453 aa11.08□□□□□ -0.64
TVP23A-205ENST00000572428 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
TVP23A-205ENST00000572428 WNK3Q9BYP7 1800 aa11.08□□□□□ -0.64
TVP23A-205ENST00000572428 CERKQ8TCT0 537 aa11.08□□□□□ -0.64
TVP23A-205ENST00000572428 NWD2Q9ULI1 1742 aa11.08□□□□□ -0.64
TVP23A-205ENST00000572428 PLEKHG2Q9H7P9 1386 aa11.08□□□□□ -0.64
TVP23A-205ENST00000572428 PLCH1Q4KWH8 1693 aa11.07□□□□□ -0.64
TVP23A-205ENST00000572428 NRAPQ86VF7 1730 aa11.07□□□□□ -0.64
TVP23A-205ENST00000572428 ZNF521Q96K83 1311 aa11.07□□□□□ -0.64
TVP23A-205ENST00000572428 FCHSD2O94868 740 aa11.06□□□□□ -0.64
TVP23A-205ENST00000572428 EIF4A2Q14240 407 aaKnown RBP11.06□□□□□ -0.64
TVP23A-205ENST00000572428 NKX1-1Q15270 411 aaPredicted RBP11.06□□□□□ -0.64
TVP23A-205ENST00000572428 NUTM2GQ5VZR2 741 aa11.06□□□□□ -0.64
TVP23A-205ENST00000572428 IGSF1Q8N6C5 1336 aa11.06□□□□□ -0.64
TVP23A-205ENST00000572428 CREBRFQ8IUR6 639 aa11.06□□□□□ -0.64
TVP23A-205ENST00000572428 KCNV2Q8TDN2 545 aa11.06□□□□□ -0.64
TVP23A-205ENST00000572428 LRRC59Q96AG4 307 aaKnown RBP11.06□□□□□ -0.64
TVP23A-205ENST00000572428 RUNDC1Q96C34 613 aa11.06□□□□□ -0.64
TVP23A-205ENST00000572428 PKD1L3Q7Z443 1732 aa11.06□□□□□ -0.64
TVP23A-205ENST00000572428 MTA1Q13330 715 aa11.05□□□□□ -0.64
TVP23A-205ENST00000572428 HSP90AB2PQ58FF8 381 aa11.05□□□□□ -0.64
TVP23A-205ENST00000572428 NBPF6Q5VWK0 638 aa11.05□□□□□ -0.64
TVP23A-205ENST00000572428 ANKRD23Q86SG2 305 aa11.05□□□□□ -0.64
TVP23A-205ENST00000572428 NBPF5PQ86XG9 351 aaPredicted RBP11.05□□□□□ -0.64
TVP23A-205ENST00000572428 NBPF4Q96M43 638 aa11.05□□□□□ -0.64
TVP23A-205ENST00000572428 PNNQ9H307 717 aaKnown RBP11.05□□□□□ -0.64
TVP23A-205ENST00000572428 YY1AP1Q9H869 796 aa11.05□□□□□ -0.64
TVP23A-205ENST00000572428 ADAMTS7Q9UKP4 1686 aa11.05□□□□□ -0.64
TVP23A-205ENST00000572428 PNMA2Q9UL42 364 aa11.05□□□□□ -0.64
TVP23A-205ENST00000572428 LRRC37A3O60309 1634 aa11.04□□□□□ -0.64
TVP23A-205ENST00000572428 PARP4Q9UKK3 1724 aaKnown RBP11.04□□□□□ -0.64
TVP23A-205ENST00000572428 B4GALNT3Q6L9W6 998 aa11.04□□□□□ -0.64
TVP23A-205ENST00000572428 PROCA1Q8NCQ7 364 aaPredicted RBP11.04□□□□□ -0.64
TVP23A-205ENST00000572428 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.04□□□□□ -0.64
TVP23A-205ENST00000572428 AMPHP49418 695 aa11.03□□□□□ -0.64
TVP23A-205ENST00000572428 VTI1AQ96AJ9 217 aa11.03□□□□□ -0.64
TVP23A-205ENST00000572428 RCAN3Q9UKA8 241 aa11.03□□□□□ -0.64
TVP23A-205ENST00000572428 MAP4K4O95819 1239 aaPredicted RBP11.03□□□□□ -0.64
TVP23A-205ENST00000572428 KRBA2Q6ZNG9 492 aa11.03□□□□□ -0.64
TVP23A-205ENST00000572428 TRAIPQ9BWF2 469 aa11.03□□□□□ -0.64
TVP23A-205ENST00000572428 KIF4AO95239 1232 aa11.02□□□□□ -0.65
TVP23A-205ENST00000572428 U2AF1L5P0DN76 240 aaPredicted RBP11.02□□□□□ -0.65
TVP23A-205ENST00000572428 U2AF1Q01081 240 aaKnown RBP eCLIP11.02□□□□□ -0.65
TVP23A-205ENST00000572428 SLC20A2Q08357 652 aa11.02□□□□□ -0.65
TVP23A-205ENST00000572428 ZNF280DQ6N043 979 aa11.02□□□□□ -0.65
TVP23A-205ENST00000572428 MAMSTRQ6ZN01 415 aa11.02□□□□□ -0.65
TVP23A-205ENST00000572428 SHANK3Q9BYB0 1731 aa11.02□□□□□ -0.65
TVP23A-205ENST00000572428 EPB41L2O43491 1005 aaKnown RBP11.02□□□□□ -0.65
TVP23A-205ENST00000572428 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.65
TVP23A-205ENST00000572428 IPO8O15397 1037 aaKnown RBP11.01□□□□□ -0.65
TVP23A-205ENST00000572428 PAX3P23760 479 aa11.01□□□□□ -0.65
TVP23A-205ENST00000572428 COL5A2P05997 1499 aaPredicted RBP11.01□□□□□ -0.65
TVP23A-205ENST00000572428 KIAA0232Q92628 1395 aa11.01□□□□□ -0.65
TVP23A-205ENST00000572428 RRP1P56182 461 aaKnown RBP11.01□□□□□ -0.65
TVP23A-205ENST00000572428 SATB1Q01826 763 aa11.01□□□□□ -0.65
TVP23A-205ENST00000572428 SIPA1L3O60292 1781 aaPredicted RBP11.01□□□□□ -0.65
TVP23A-205ENST00000572428 EYA1Q99502 592 aa11□□□□□ -0.65
TVP23A-205ENST00000572428 AXIN2Q9Y2T1 843 aa11□□□□□ -0.65
TVP23A-205ENST00000572428 UBAP1LF5GYI3 381 aa11□□□□□ -0.65
TVP23A-205ENST00000572428 MICAL1Q8TDZ2 1067 aa11□□□□□ -0.65
TVP23A-205ENST00000572428 CALR3Q96L12 384 aaKnown RBP10.99□□□□□ -0.65
TVP23A-205ENST00000572428 SPATA32Q96LK8 384 aa10.99□□□□□ -0.65
TVP23A-205ENST00000572428 RAI14Q9P0K7 980 aa10.99□□□□□ -0.65
TVP23A-205ENST00000572428 U2SURPO15042 1029 aaKnown RBP10.99□□□□□ -0.65
TVP23A-205ENST00000572428 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
TVP23A-205ENST00000572428 CT47A1Q5JQC4 288 aaPredicted RBP10.99□□□□□ -0.65
TVP23A-205ENST00000572428 SCN11AQ9UI33 1791 aa10.99□□□□□ -0.65
TVP23A-205ENST00000572428 CCDC181Q5TID7 509 aa10.99□□□□□ -0.65
TVP23A-205ENST00000572428 CCDC146Q8IYE0 955 aa10.99□□□□□ -0.65
TVP23A-205ENST00000572428 TRMT2AQ8IZ69 625 aaKnown RBP10.99□□□□□ -0.65
TVP23A-205ENST00000572428 TCP11L2Q8N4U5 519 aa10.99□□□□□ -0.65
TVP23A-205ENST00000572428 APAF1O14727 1248 aa10.98□□□□□ -0.65
TVP23A-205ENST00000572428 LMOD3Q0VAK6 560 aa10.98□□□□□ -0.65
TVP23A-205ENST00000572428 CABLES1Q8TDN4 633 aa10.98□□□□□ -0.65
TVP23A-205ENST00000572428 GORABQ5T7V8 394 aa10.98□□□□□ -0.65
TVP23A-205ENST00000572428 PRKAR2BP31323 418 aa10.97□□□□□ -0.65
TVP23A-205ENST00000572428 TMPOP42166 694 aaKnown RBP10.97□□□□□ -0.65
TVP23A-205ENST00000572428 GOLGA2Q08379 1002 aa10.97□□□□□ -0.65
TVP23A-205ENST00000572428 CDCA7LQ96GN5 454 aa10.97□□□□□ -0.65
TVP23A-205ENST00000572428 JCADQ9P266 1359 aa10.97□□□□□ -0.65
TVP23A-205ENST00000572428 KIF20AO95235 890 aa10.97□□□□□ -0.65
TVP23A-205ENST00000572428 PDE6BP35913 854 aa10.97□□□□□ -0.65
TVP23A-205ENST00000572428 IRX5P78411 483 aaPredicted RBP10.97□□□□□ -0.65
TVP23A-205ENST00000572428 TAF3Q5VWG9 929 aa10.97□□□□□ -0.65
TVP23A-205ENST00000572428 WDR63Q8IWG1 891 aa10.97□□□□□ -0.65
TVP23A-205ENST00000572428 ANKRD24Q8TF21 1146 aa10.97□□□□□ -0.65
TVP23A-205ENST00000572428 SULT6B1Q6IMI4 303 aa10.96□□□□□ -0.65
TVP23A-205ENST00000572428 TRIM35Q9UPQ4 493 aa10.96□□□□□ -0.65
TVP23A-205ENST00000572428 SLIT2O94813 1529 aa10.96□□□□□ -0.65
TVP23A-205ENST00000572428 RAB11FIP3O75154 756 aa10.96□□□□□ -0.66
TVP23A-205ENST00000572428 ZC3H6P61129 1189 aaKnown RBP10.96□□□□□ -0.66
TVP23A-205ENST00000572428 ANKRD13AQ8IZ07 590 aa10.96□□□□□ -0.66
TVP23A-205ENST00000572428 PHACTR3Q96KR7 559 aa10.96□□□□□ -0.66
TVP23A-205ENST00000572428 HDAC1Q13547 482 aaPredicted RBP10.96□□□□□ -0.66
TVP23A-205ENST00000572428 GSE1Q14687 1217 aa10.96□□□□□ -0.66
TVP23A-205ENST00000572428 NFE2L2Q16236 605 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms