RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 C1orf115Q9H7X2 142 aa7.72□□□□□ -1.17
TRAPPC1-204ENST00000571947 PHAXQ9H814 394 aaKnown RBP7.72□□□□□ -1.17
TRAPPC1-204ENST00000571947 CHPF2Q9P2E5 772 aa7.72□□□□□ -1.17
TRAPPC1-204ENST00000571947 DBF4Q9UBU7 674 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC1-204ENST00000571947 NUP98P52948 1817 aa7.72□□□□□ -1.17
TRAPPC1-204ENST00000571947 TJP1Q07157 1748 aa7.72□□□□□ -1.17
TRAPPC1-204ENST00000571947 PIP4K2BP78356 416 aa7.71□□□□□ -1.18
TRAPPC1-204ENST00000571947 FAM161AQ3B820 660 aa7.71□□□□□ -1.18
TRAPPC1-204ENST00000571947 SIRT2Q8IXJ6 389 aa7.71□□□□□ -1.18
TRAPPC1-204ENST00000571947 FMNL2Q96PY5 1086 aa7.71□□□□□ -1.18
TRAPPC1-204ENST00000571947 MEIS3Q99687 375 aa7.71□□□□□ -1.18
TRAPPC1-204ENST00000571947 HYPKQ9NX55 129 aa7.71□□□□□ -1.18
TRAPPC1-204ENST00000571947 MYH3P11055 1940 aa7.71□□□□□ -1.18
TRAPPC1-204ENST00000571947 SLIT2O94813 1529 aa7.71□□□□□ -1.18
TRAPPC1-204ENST00000571947 SBF2Q86WG5 1849 aa7.71□□□□□ -1.18
TRAPPC1-204ENST00000571947 ADCY9O60503 1353 aa7.71□□□□□ -1.18
TRAPPC1-204ENST00000571947 CICQ96RK0 1608 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC1-204ENST00000571947 TNS2Q63HR2 1409 aa7.7□□□□□ -1.18
TRAPPC1-204ENST00000571947 PRAMEF22A3QJZ6 481 aa7.7□□□□□ -1.18
TRAPPC1-204ENST00000571947 UBAP1LF5GYI3 381 aa7.7□□□□□ -1.18
TRAPPC1-204ENST00000571947 GNAI3P08754 354 aa7.7□□□□□ -1.18
TRAPPC1-204ENST00000571947 NUCB1Q02818 461 aa7.7□□□□□ -1.18
TRAPPC1-204ENST00000571947 CEP85Q6P2H3 762 aa7.7□□□□□ -1.18
TRAPPC1-204ENST00000571947 TTC5Q8N0Z6 440 aa7.7□□□□□ -1.18
TRAPPC1-204ENST00000571947 ZNF496Q96IT1 587 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC1-204ENST00000571947 DDX21Q9NR30 783 aaKnown RBP eCLIP7.7□□□□□ -1.18
TRAPPC1-204ENST00000571947 ZNF831Q5JPB2 1677 aa7.7□□□□□ -1.18
TRAPPC1-204ENST00000571947 ANXA1P04083 346 aa7.69□□□□□ -1.18
TRAPPC1-204ENST00000571947 GNAI2P04899 355 aa7.69□□□□□ -1.18
TRAPPC1-204ENST00000571947 SNRPA1P09661 255 aaKnown RBP7.69□□□□□ -1.18
TRAPPC1-204ENST00000571947 PDIA6Q15084 440 aa7.69□□□□□ -1.18
TRAPPC1-204ENST00000571947 PROSER3Q2NL68 480 aa7.69□□□□□ -1.18
TRAPPC1-204ENST00000571947 C8orf34Q49A92 452 aa7.69□□□□□ -1.18
TRAPPC1-204ENST00000571947 DDX54Q8TDD1 881 aaKnown RBP7.69□□□□□ -1.18
TRAPPC1-204ENST00000571947 DNAAF4Q8WXU2 420 aa7.69□□□□□ -1.18
TRAPPC1-204ENST00000571947 CDCA7Q9BWT1 371 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC1-204ENST00000571947 DCTPP1Q9H773 170 aa7.69□□□□□ -1.18
TRAPPC1-204ENST00000571947 USP35Q9P2H5 1018 aa7.69□□□□□ -1.18
TRAPPC1-204ENST00000571947 JCADQ9P266 1359 aa7.69□□□□□ -1.18
TRAPPC1-204ENST00000571947 IBTKQ9P2D0 1353 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC1-204ENST00000571947 RREB1Q92766 1687 aa7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 PI4KAP2A4QPH2 592 aa7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 HMMRO75330 724 aa7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 ALDH1L1O75891 902 aa7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 ADAMTS2O95450 1211 aa7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 DDX58O95786 925 aaKnown RBP7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 BEND3Q5T5X7 828 aa7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 KSR2Q6VAB6 950 aa7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 CHD1LQ86WJ1 897 aa7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 PI4KAP1Q8N8J0 262 aa7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 SRCIN1Q9C0H9 1055 aa7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 USP44Q9H0E7 712 aa7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 THRAP3Q9Y2W1 955 aaKnown RBP7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 USP16Q9Y5T5 823 aa7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 COL5A3P25940 1745 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 ERBB4Q15303 1308 aa7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 SPATA31A1Q5TZJ5 1347 aa7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 MYH14Q7Z406 1995 aaKnown RBP7.68□□□□□ -1.18
TRAPPC1-204ENST00000571947 CASZ1Q86V15 1759 aa7.67□□□□□ -1.18
TRAPPC1-204ENST00000571947 NUTM2BA6NNL0 878 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC1-204ENST00000571947 NUTM2EB1AL46 878 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC1-204ENST00000571947 EXOC5O00471 708 aa7.67□□□□□ -1.18
TRAPPC1-204ENST00000571947 ATP8B2P98198 1209 aa7.67□□□□□ -1.18
TRAPPC1-204ENST00000571947 ANKRD45Q5TZF3 282 aa7.67□□□□□ -1.18
TRAPPC1-204ENST00000571947 NUTM2AQ8IVF1 878 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC1-204ENST00000571947 LNPKQ9C0E8 428 aa7.67□□□□□ -1.18
TRAPPC1-204ENST00000571947 TMOD3Q9NYL9 352 aa7.67□□□□□ -1.18
TRAPPC1-204ENST00000571947 SPATA31A5Q5VU36 1347 aa7.67□□□□□ -1.18
TRAPPC1-204ENST00000571947 SPATA31A7Q8IWB4 1347 aa7.67□□□□□ -1.18
TRAPPC1-204ENST00000571947 THSD7AQ9UPZ6 1657 aa7.67□□□□□ -1.18
TRAPPC1-204ENST00000571947 BTAF1O14981 1849 aa7.66□□□□□ -1.18
TRAPPC1-204ENST00000571947 TAF1LQ8IZX4 1826 aa7.66□□□□□ -1.18
TRAPPC1-204ENST00000571947 UBTFL1P0CB47 393 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC1-204ENST00000571947 LRP10Q7Z4F1 713 aa7.66□□□□□ -1.18
TRAPPC1-204ENST00000571947 CERKQ8TCT0 537 aa7.66□□□□□ -1.18
TRAPPC1-204ENST00000571947 MAP3K2Q9Y2U5 619 aa7.66□□□□□ -1.18
TRAPPC1-204ENST00000571947 BCL9O00512 1426 aa7.66□□□□□ -1.18
TRAPPC1-204ENST00000571947 MYL6BP14649 208 aa7.65□□□□□ -1.18
TRAPPC1-204ENST00000571947 SPATA31A6Q5VVP1 1343 aa7.65□□□□□ -1.18
TRAPPC1-204ENST00000571947 BRWD3Q6RI45 1802 aa7.65□□□□□ -1.18
TRAPPC1-204ENST00000571947 NHSQ6T4R5 1651 aa7.65□□□□□ -1.18
TRAPPC1-204ENST00000571947 BARGINQ6ZT62 677 aa7.65□□□□□ -1.18
TRAPPC1-204ENST00000571947 COPS6Q7L5N1 327 aa7.65□□□□□ -1.18
TRAPPC1-204ENST00000571947 LINS1Q8NG48 757 aa7.65□□□□□ -1.18
TRAPPC1-204ENST00000571947 XAGE3Q8WTP9 111 aa7.65□□□□□ -1.18
TRAPPC1-204ENST00000571947 HDAC5Q9UQL6 1122 aa7.65□□□□□ -1.18
TRAPPC1-204ENST00000571947 LRRFIP2Q9Y608 721 aaKnown RBP7.65□□□□□ -1.18
TRAPPC1-204ENST00000571947 BCORQ6W2J9 1755 aa7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 LY75O60449 1722 aa7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 BCL9LQ86UU0 1499 aa7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 UTYO14607 1347 aa7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 ANP32AP39687 249 aaKnown RBP7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 AIMP1Q12904 312 aaKnown RBP7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 DDB1Q16531 1140 aa7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 ANKRD13DQ6ZTN6 518 aa7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 RIC3Q7Z5B4 369 aa7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 UNC5CLQ8IV45 518 aa7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 VSIG10Q8N0Z9 540 aa7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 SSH3Q8TE77 659 aa7.64□□□□□ -1.19
TRAPPC1-204ENST00000571947 PIGBQ92521 554 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms