RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 HTRA3P83110 453 aa18.28■□□□□ 0.52
RPAIN-209ENST00000571558 EIF4A2Q14240 407 aaKnown RBP18.28■□□□□ 0.52
RPAIN-209ENST00000571558 USP42Q9H9J4 1324 aaKnown RBP18.27■□□□□ 0.52
RPAIN-209ENST00000571558 TNRC6CQ9HCJ0 1690 aaKnown RBP18.27■□□□□ 0.51
RPAIN-209ENST00000571558 IL13P35225 146 aa18.26■□□□□ 0.51
RPAIN-209ENST00000571558 DIAPH1O60610 1272 aaKnown RBP18.25■□□□□ 0.51
RPAIN-209ENST00000571558 CRKLP46109 303 aaKnown RBP18.25■□□□□ 0.51
RPAIN-209ENST00000571558 VEGFAP15692 232 aaPredicted RBP18.24■□□□□ 0.51
RPAIN-209ENST00000571558 FKBP8Q14318 412 aa18.24■□□□□ 0.51
RPAIN-209ENST00000571558 PIAS4Q8N2W9 510 aaPredicted RBP18.24■□□□□ 0.51
RPAIN-209ENST00000571558 TM4SF1P30408 202 aa18.23■□□□□ 0.51
RPAIN-209ENST00000571558 DDR1Q08345 913 aa18.23■□□□□ 0.51
RPAIN-209ENST00000571558 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
RPAIN-209ENST00000571558 GLTPD2A6NH11 291 aa18.23■□□□□ 0.51
RPAIN-209ENST00000571558 PTCD1O75127 700 aaKnown RBP18.23■□□□□ 0.51
RPAIN-209ENST00000571558 LMNB1P20700 586 aa18.23■□□□□ 0.51
RPAIN-209ENST00000571558 ZNF530Q6P9A1 599 aaPredicted RBP18.23■□□□□ 0.51
RPAIN-209ENST00000571558 FAM9BQ8IZU0 186 aa18.23■□□□□ 0.51
RPAIN-209ENST00000571558 MYH14Q7Z406 1995 aaKnown RBP18.22■□□□□ 0.51
RPAIN-209ENST00000571558 POLRMTO00411 1230 aaKnown RBP18.22■□□□□ 0.51
RPAIN-209ENST00000571558 CHRNA5P30532 468 aa18.22■□□□□ 0.51
RPAIN-209ENST00000571558 SRP68Q9UHB9 627 aaKnown RBP18.22■□□□□ 0.51
RPAIN-209ENST00000571558 ADAMTS8Q9UP79 889 aa18.22■□□□□ 0.51
RPAIN-209ENST00000571558 ZPR1O75312 459 aa18.21■□□□□ 0.51
RPAIN-209ENST00000571558 WDR43Q15061 677 aaKnown RBP eCLIP18.21■□□□□ 0.51
RPAIN-209ENST00000571558 C1orf141Q5JVX7 400 aa18.21■□□□□ 0.51
RPAIN-209ENST00000571558 NFATC2IPQ8NCF5 419 aa18.21■□□□□ 0.51
RPAIN-209ENST00000571558 CAPN15O75808 1086 aa18.2■□□□□ 0.5
RPAIN-209ENST00000571558 NUDCQ9Y266 331 aa18.2■□□□□ 0.5
RPAIN-209ENST00000571558 SBF1O95248 1867 aa18.19■□□□□ 0.5
RPAIN-209ENST00000571558 INTS5Q6P9B9 1019 aaKnown RBP18.19■□□□□ 0.5
RPAIN-209ENST00000571558 HSPA1AP0DMV8 641 aaKnown RBP18.17■□□□□ 0.5
RPAIN-209ENST00000571558 HSPA1BP0DMV9 641 aaKnown RBP18.17■□□□□ 0.5
RPAIN-209ENST00000571558 U2SURPO15042 1029 aaKnown RBP18.16■□□□□ 0.5
RPAIN-209ENST00000571558 U2AF1L5P0DN76 240 aaPredicted RBP18.16■□□□□ 0.5
RPAIN-209ENST00000571558 U2AF1Q01081 240 aaKnown RBP eCLIP18.16■□□□□ 0.5
RPAIN-209ENST00000571558 TTLL6Q8N841 843 aa18.16■□□□□ 0.5
RPAIN-209ENST00000571558 USPL1Q5W0Q7 1092 aa18.15■□□□□ 0.5
RPAIN-209ENST00000571558 DPY19L2Q6NUT2 758 aa18.15■□□□□ 0.5
RPAIN-209ENST00000571558 NARFQ9UHQ1 456 aa18.15■□□□□ 0.5
RPAIN-209ENST00000571558 SOS1Q07889 1333 aaPredicted RBP18.15■□□□□ 0.5
RPAIN-209ENST00000571558 RASSF7Q02833 373 aa18.14■□□□□ 0.49
RPAIN-209ENST00000571558 NFIXQ14938 502 aa18.14■□□□□ 0.49
RPAIN-209ENST00000571558 POTEDQ86YR6 584 aa18.14■□□□□ 0.49
RPAIN-209ENST00000571558 RSPH6AQ9H0K4 717 aa18.14■□□□□ 0.49
RPAIN-209ENST00000571558 PDZRN3Q9UPQ7 1066 aa18.14■□□□□ 0.49
RPAIN-209ENST00000571558 ADAMTS7Q9UKP4 1686 aa18.13■□□□□ 0.49
RPAIN-209ENST00000571558 H0YIN7 160 aa18.13■□□□□ 0.49
RPAIN-209ENST00000571558 PLEKHF1Q96S99 279 aa18.13■□□□□ 0.49
RPAIN-209ENST00000571558 TJP1Q07157 1748 aa18.13■□□□□ 0.49
RPAIN-209ENST00000571558 SERPINB2P05120 415 aa18.12■□□□□ 0.49
RPAIN-209ENST00000571558 CYP19A1P11511 503 aaPredicted RBP18.12■□□□□ 0.49
RPAIN-209ENST00000571558 AEBP1Q8IUX7 1158 aa18.12■□□□□ 0.49
RPAIN-209ENST00000571558 HMOX1P09601 288 aa18.11■□□□□ 0.49
RPAIN-209ENST00000571558 AKAP4Q5JQC9 854 aa18.11■□□□□ 0.49
RPAIN-209ENST00000571558 SULT6B1Q6IMI4 303 aa18.11■□□□□ 0.49
RPAIN-209ENST00000571558 DNAJC10Q8IXB1 793 aa18.11■□□□□ 0.49
RPAIN-209ENST00000571558 VSIG10Q8N0Z9 540 aa18.11■□□□□ 0.49
RPAIN-209ENST00000571558 SLC52A2Q9HAB3 445 aa18.11■□□□□ 0.49
RPAIN-209ENST00000571558 NRXN2Q9P2S2 1712 aa18.11■□□□□ 0.49
RPAIN-209ENST00000571558 CREBZFQ9NS37 354 aa18.1■□□□□ 0.49
RPAIN-209ENST00000571558 COL15A1P39059 1388 aa18.1■□□□□ 0.49
RPAIN-209ENST00000571558 POTECB2RU33 542 aa18.09■□□□□ 0.49
RPAIN-209ENST00000571558 NFKBIEO00221 500 aa18.09■□□□□ 0.49
RPAIN-209ENST00000571558 C2CD5Q86YS7 1000 aa18.09■□□□□ 0.49
RPAIN-209ENST00000571558 CCDC146Q8IYE0 955 aa18.09■□□□□ 0.49
RPAIN-209ENST00000571558 RUNDC1Q96C34 613 aa18.09■□□□□ 0.49
RPAIN-209ENST00000571558 PRKAR2BP31323 418 aa18.08■□□□□ 0.49
RPAIN-209ENST00000571558 DLEC1Q9Y238 1755 aa18.08■□□□□ 0.48
RPAIN-209ENST00000571558 SCN11AQ9UI33 1791 aa18.07■□□□□ 0.48
RPAIN-209ENST00000571558 CHADLQ6NUI6 762 aa18.06■□□□□ 0.48
RPAIN-209ENST00000571558 PNNQ9H307 717 aaKnown RBP18.06■□□□□ 0.48
RPAIN-209ENST00000571558 BCL2L12Q9HB09 334 aa18.06■□□□□ 0.48
RPAIN-209ENST00000571558 LTBP3Q9NS15 1303 aa18.06■□□□□ 0.48
RPAIN-209ENST00000571558 AFDNP55196 1824 aaKnown RBP18.06■□□□□ 0.48
RPAIN-209ENST00000571558 A0A087WZG4 1122 aa18.06■□□□□ 0.48
RPAIN-209ENST00000571558 PDE6BP35913 854 aa18.06■□□□□ 0.48
RPAIN-209ENST00000571558 ERFEQ4G0M1 354 aa18.06■□□□□ 0.48
RPAIN-209ENST00000571558 PHACTR3Q96KR7 559 aa18.06■□□□□ 0.48
RPAIN-209ENST00000571558 BRIP1Q9BX63 1249 aa18.06■□□□□ 0.48
RPAIN-209ENST00000571558 ZBTB1Q9Y2K1 713 aa18.06■□□□□ 0.48
RPAIN-209ENST00000571558 TIAM2Q8IVF5 1701 aa18.05■□□□□ 0.48
RPAIN-209ENST00000571558 HNRNPUQ00839 825 aaKnown RBP eCLIP18.05■□□□□ 0.48
RPAIN-209ENST00000571558 YTHDC1Q96MU7 727 aaKnown RBP18.05■□□□□ 0.48
RPAIN-209ENST00000571558 PRDM10Q9NQV6 1147 aa18.05■□□□□ 0.48
RPAIN-209ENST00000571558 APAF1O14727 1248 aa18.04■□□□□ 0.48
RPAIN-209ENST00000571558 STARD3NLO95772 234 aa18.04■□□□□ 0.48
RPAIN-209ENST00000571558 MRC1P22897 1456 aa18.04■□□□□ 0.48
RPAIN-209ENST00000571558 RNMTO43148 476 aaKnown RBP18.03■□□□□ 0.48
RPAIN-209ENST00000571558 LGR6Q9HBX8 967 aa18.03■□□□□ 0.48
RPAIN-209ENST00000571558 IQCA1LA6NCM1 817 aa18.02■□□□□ 0.48
RPAIN-209ENST00000571558 EIF5P55010 431 aaKnown RBP18.02■□□□□ 0.48
RPAIN-209ENST00000571558 SOGA3Q5TF21 947 aa18.02■□□□□ 0.48
RPAIN-209ENST00000571558 MAPK8IP3Q9UPT6 1336 aa18.01■□□□□ 0.47
RPAIN-209ENST00000571558 SLC39A6Q13433 755 aa18.01■□□□□ 0.47
RPAIN-209ENST00000571558 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
RPAIN-209ENST00000571558 ZNF622Q969S3 477 aaKnown RBP eCLIP18.01■□□□□ 0.47
RPAIN-209ENST00000571558 TAOK3Q9H2K8 898 aa18.01■□□□□ 0.47
RPAIN-209ENST00000571558 CARMIL3Q8ND23 1372 aa18■□□□□ 0.47
RPAIN-209ENST00000571558 C21orf2O43822 256 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms