RNA–Protein interactions for RNA: ENST00000571245.5

ATP2A3-209, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 868 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-209ENST00000571245 CICQ96RK0 1608 aaPredicted RBP18.05■□□□□ 0.48
ATP2A3-209ENST00000571245 KCPQ6ZWJ8 1503 aa18.05■□□□□ 0.48
ATP2A3-209ENST00000571245 SRP68Q9UHB9 627 aaKnown RBP18.05■□□□□ 0.48
ATP2A3-209ENST00000571245 SOS1Q07889 1333 aaPredicted RBP18.04■□□□□ 0.48
ATP2A3-209ENST00000571245 USP42Q9H9J4 1324 aaKnown RBP18.04■□□□□ 0.48
ATP2A3-209ENST00000571245 DCTN1Q14203 1278 aa18.04■□□□□ 0.48
ATP2A3-209ENST00000571245 PNISRQ8TF01 805 aaKnown RBP18.04■□□□□ 0.48
ATP2A3-209ENST00000571245 ADAMTS8Q9UP79 889 aa18.04■□□□□ 0.48
ATP2A3-209ENST00000571245 ZBTB1Q9Y2K1 713 aa18.04■□□□□ 0.48
ATP2A3-209ENST00000571245 HEG1Q9ULI3 1381 aa18.04■□□□□ 0.48
ATP2A3-209ENST00000571245 TJP1Q07157 1748 aa18.03■□□□□ 0.48
ATP2A3-209ENST00000571245 A0A087WZG4 1122 aa18.02■□□□□ 0.48
ATP2A3-209ENST00000571245 C4AP0C0L4 1744 aa18.02■□□□□ 0.48
ATP2A3-209ENST00000571245 FKBP8Q14318 412 aa18.02■□□□□ 0.48
ATP2A3-209ENST00000571245 TAF7Q15545 349 aaPredicted RBP18.02■□□□□ 0.48
ATP2A3-209ENST00000571245 NFE2L2Q16236 605 aa18.02■□□□□ 0.48
ATP2A3-209ENST00000571245 USPL1Q5W0Q7 1092 aa18.02■□□□□ 0.48
ATP2A3-209ENST00000571245 FAM9BQ8IZU0 186 aa18.02■□□□□ 0.48
ATP2A3-209ENST00000571245 PLEKHF1Q96S99 279 aa18.02■□□□□ 0.48
ATP2A3-209ENST00000571245 ZNF330Q9Y3S2 320 aaPredicted RBP18.02■□□□□ 0.48
ATP2A3-209ENST00000571245 MYH14Q7Z406 1995 aaKnown RBP18.02■□□□□ 0.47
ATP2A3-209ENST00000571245 KCNQ3O43525 872 aa18.01■□□□□ 0.47
ATP2A3-209ENST00000571245 YBX3P16989 372 aaKnown RBP eCLIP18.01■□□□□ 0.47
ATP2A3-209ENST00000571245 NARFQ9UHQ1 456 aa18.01■□□□□ 0.47
ATP2A3-209ENST00000571245 COL15A1P39059 1388 aa18.01■□□□□ 0.47
ATP2A3-209ENST00000571245 UTRNP46939 3433 aa18.01■□□□□ 0.47
ATP2A3-209ENST00000571245 UBR2Q8IWV8 1755 aa18■□□□□ 0.47
ATP2A3-209ENST00000571245 SNRPA1P09661 255 aaKnown RBP18■□□□□ 0.47
ATP2A3-209ENST00000571245 TGFB2P61812 414 aa18■□□□□ 0.47
ATP2A3-209ENST00000571245 SIPA1L3O60292 1781 aaPredicted RBP17.99■□□□□ 0.47
ATP2A3-209ENST00000571245 CCDC146Q8IYE0 955 aa17.99■□□□□ 0.47
ATP2A3-209ENST00000571245 WWC3Q9ULE0 1092 aa17.99■□□□□ 0.47
ATP2A3-209ENST00000571245 EIF5P55010 431 aaKnown RBP17.98■□□□□ 0.47
ATP2A3-209ENST00000571245 A1BGP04217 495 aa17.97■□□□□ 0.47
ATP2A3-209ENST00000571245 IL6STP40189 918 aaPredicted RBP17.97■□□□□ 0.47
ATP2A3-209ENST00000571245 RIPK4P57078 832 aa17.97■□□□□ 0.47
ATP2A3-209ENST00000571245 MIS18AQ9NYP9 233 aa17.97■□□□□ 0.47
ATP2A3-209ENST00000571245 A0A0G2JLW4 131 aa17.96■□□□□ 0.47
ATP2A3-209ENST00000571245 TM4SF1P30408 202 aa17.96■□□□□ 0.47
ATP2A3-209ENST00000571245 RUNDC1Q96C34 613 aa17.96■□□□□ 0.47
ATP2A3-209ENST00000571245 USP16Q9Y5T5 823 aa17.96■□□□□ 0.47
ATP2A3-209ENST00000571245 DDR1Q08345 913 aa17.95■□□□□ 0.46
ATP2A3-209ENST00000571245 LMOD3Q0VAK6 560 aa17.95■□□□□ 0.46
ATP2A3-209ENST00000571245 NFIXQ14938 502 aa17.95■□□□□ 0.46
ATP2A3-209ENST00000571245 TBC1D2BQ9UPU7 963 aa17.95■□□□□ 0.46
ATP2A3-209ENST00000571245 POLRMTO00411 1230 aaKnown RBP17.94■□□□□ 0.46
ATP2A3-209ENST00000571245 BICDL1Q6ZP65 573 aa17.94■□□□□ 0.46
ATP2A3-209ENST00000571245 THUMPD2Q9BTF0 503 aaKnown RBP17.94■□□□□ 0.46
ATP2A3-209ENST00000571245 GOLGB1Q14789 3259 aaKnown RBP17.94■□□□□ 0.46
ATP2A3-209ENST00000571245 C10orf71Q711Q0 1435 aa17.94■□□□□ 0.46
ATP2A3-209ENST00000571245 KIF13BQ9NQT8 1826 aa17.93■□□□□ 0.46
ATP2A3-209ENST00000571245 DPEP1P16444 411 aa17.93■□□□□ 0.46
ATP2A3-209ENST00000571245 ZNF784Q8NCA9 323 aaPredicted RBP17.93■□□□□ 0.46
ATP2A3-209ENST00000571245 BCS1LQ9Y276 419 aa17.93■□□□□ 0.46
ATP2A3-209ENST00000571245 DLG5Q8TDM6 1919 aa17.93■□□□□ 0.46
ATP2A3-209ENST00000571245 PRAMEF22A3QJZ6 481 aa17.92■□□□□ 0.46
ATP2A3-209ENST00000571245 TMPOP42166 694 aaKnown RBP17.92■□□□□ 0.46
ATP2A3-209ENST00000571245 NEUROD2Q15784 382 aa17.92■□□□□ 0.46
ATP2A3-209ENST00000571245 BCL2L12Q9HB09 334 aa17.92■□□□□ 0.46
ATP2A3-209ENST00000571245 PXDNLA1KZ92 1463 aa17.91■□□□□ 0.46
ATP2A3-209ENST00000571245 SERPINB2P05120 415 aa17.91■□□□□ 0.46
ATP2A3-209ENST00000571245 DZIP3Q86Y13 1208 aaKnown RBP17.91■□□□□ 0.46
ATP2A3-209ENST00000571245 PIM2Q9P1W9 311 aa17.91■□□□□ 0.46
ATP2A3-209ENST00000571245 TSPYL4Q9UJ04 414 aa17.91■□□□□ 0.46
ATP2A3-209ENST00000571245 APAF1O14727 1248 aa17.9■□□□□ 0.46
ATP2A3-209ENST00000571245 NPHP1O15259 732 aa17.9■□□□□ 0.46
ATP2A3-209ENST00000571245 PIP4K2AP48426 406 aaPredicted RBP17.9■□□□□ 0.46
ATP2A3-209ENST00000571245 SETDB2Q96T68 719 aa17.9■□□□□ 0.46
ATP2A3-209ENST00000571245 RRP7AQ9Y3A4 280 aaKnown RBP17.9■□□□□ 0.46
ATP2A3-209ENST00000571245 EIF4A1P60842 406 aaKnown RBP17.89■□□□□ 0.45
ATP2A3-209ENST00000571245 ZNF652Q9Y2D9 606 aa17.89■□□□□ 0.45
ATP2A3-209ENST00000571245 N4BP2Q86UW6 1770 aaPredicted RBP17.89■□□□□ 0.45
ATP2A3-209ENST00000571245 GIGYF1O75420 1035 aaPredicted RBP17.88■□□□□ 0.45
ATP2A3-209ENST00000571245 DALRD3Q5D0E6 543 aaKnown RBP17.88■□□□□ 0.45
ATP2A3-209ENST00000571245 TBC1D9BQ66K14 1250 aa17.88■□□□□ 0.45
ATP2A3-209ENST00000571245 SENP3-EIF4A1A0A087X0R7 540 aa17.87■□□□□ 0.45
ATP2A3-209ENST00000571245 CAMTA2O94983 1202 aa17.87■□□□□ 0.45
ATP2A3-209ENST00000571245 CHRNA5P30532 468 aa17.87■□□□□ 0.45
ATP2A3-209ENST00000571245 ARHGAP27Q6ZUM4 889 aa17.87■□□□□ 0.45
ATP2A3-209ENST00000571245 BABAM1Q9NWV8 329 aa17.86■□□□□ 0.45
ATP2A3-209ENST00000571245 CARMIL3Q8ND23 1372 aa17.86■□□□□ 0.45
ATP2A3-209ENST00000571245 NBPF26B4DH59 902 aa17.85■□□□□ 0.45
ATP2A3-209ENST00000571245 H0YIN7 160 aa17.85■□□□□ 0.45
ATP2A3-209ENST00000571245 KCNA3P22001 575 aa17.85■□□□□ 0.45
ATP2A3-209ENST00000571245 NBPF10Q6P3W6 841 aaKnown RBP17.85■□□□□ 0.45
ATP2A3-209ENST00000571245 CLEC4GQ6UXB4 293 aa17.85■□□□□ 0.45
ATP2A3-209ENST00000571245 NGEFQ8N5V2 710 aa17.85■□□□□ 0.45
ATP2A3-209ENST00000571245 NBPF15Q8N660 670 aa17.85■□□□□ 0.45
ATP2A3-209ENST00000571245 LAS1LQ9Y4W2 734 aaKnown RBP17.85■□□□□ 0.45
ATP2A3-209ENST00000571245 KIAA1551Q9HCM1 1747 aa17.84■□□□□ 0.45
ATP2A3-209ENST00000571245 CNBD1Q8NA66 436 aa17.84■□□□□ 0.45
ATP2A3-209ENST00000571245 PDE6BP35913 854 aa17.83■□□□□ 0.44
ATP2A3-209ENST00000571245 ST5P78524 1137 aa17.83■□□□□ 0.44
ATP2A3-209ENST00000571245 C2CD5Q86YS7 1000 aa17.83■□□□□ 0.44
ATP2A3-209ENST00000571245 BRCA1P38398 1863 aaKnown RBP17.83■□□□□ 0.44
ATP2A3-209ENST00000571245 AFDNP55196 1824 aaKnown RBP17.83■□□□□ 0.44
ATP2A3-209ENST00000571245 MYL6BP14649 208 aa17.82■□□□□ 0.44
ATP2A3-209ENST00000571245 KIF6Q6ZMV9 814 aa17.82■□□□□ 0.44
ATP2A3-209ENST00000571245 NBPF5PQ86XG9 351 aaPredicted RBP17.82■□□□□ 0.44
ATP2A3-209ENST00000571245 BRIP1Q9BX63 1249 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms