RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 HSP90AB1P08238 724 aaKnown RBP28.72■■■□□ 2.19
UBFD1-210ENST00000571064 CRKLP46109 303 aaKnown RBP28.71■■■□□ 2.19
UBFD1-210ENST00000571064 AEBP1Q8IUX7 1158 aa28.71■■■□□ 2.19
UBFD1-210ENST00000571064 USP42Q9H9J4 1324 aaKnown RBP28.69■■■□□ 2.18
UBFD1-210ENST00000571064 PLEKHO1Q53GL0 409 aaPredicted RBP28.69■■■□□ 2.18
UBFD1-210ENST00000571064 ZNF530Q6P9A1 599 aaPredicted RBP28.69■■■□□ 2.18
UBFD1-210ENST00000571064 TNS4Q8IZW8 715 aa28.69■■■□□ 2.18
UBFD1-210ENST00000571064 U2SURPO15042 1029 aaKnown RBP28.67■■■□□ 2.18
UBFD1-210ENST00000571064 SULT6B1Q6IMI4 303 aa28.67■■■□□ 2.18
UBFD1-210ENST00000571064 SMC1BQ8NDV3 1235 aa28.67■■■□□ 2.18
UBFD1-210ENST00000571064 SBF1O95248 1867 aa28.67■■■□□ 2.18
UBFD1-210ENST00000571064 TNRC6CQ9HCJ0 1690 aaKnown RBP28.67■■■□□ 2.18
UBFD1-210ENST00000571064 HMOX1P09601 288 aa28.65■■■□□ 2.18
UBFD1-210ENST00000571064 PCNTO95613 3336 aa28.64■■■□□ 2.18
UBFD1-210ENST00000571064 POLRMTO00411 1230 aaKnown RBP28.64■■■□□ 2.18
UBFD1-210ENST00000571064 RASSF7Q02833 373 aa28.64■■■□□ 2.18
UBFD1-210ENST00000571064 NFATC2IPQ8NCF5 419 aa28.64■■■□□ 2.18
UBFD1-210ENST00000571064 NUDCQ9Y266 331 aa28.64■■■□□ 2.18
UBFD1-210ENST00000571064 TM4SF1P30408 202 aa28.63■■■□□ 2.17
UBFD1-210ENST00000571064 AMOTQ4VCS5 1084 aa28.62■■■□□ 2.17
UBFD1-210ENST00000571064 INTS5Q6P9B9 1019 aaKnown RBP28.62■■■□□ 2.17
UBFD1-210ENST00000571064 TJP1Q07157 1748 aa28.61■■■□□ 2.17
UBFD1-210ENST00000571064 PRELPP51888 382 aa28.61■■■□□ 2.17
UBFD1-210ENST00000571064 U2AF1L5P0DN76 240 aaPredicted RBP28.6■■■□□ 2.17
UBFD1-210ENST00000571064 U2AF1Q01081 240 aaKnown RBP eCLIP28.6■■■□□ 2.17
UBFD1-210ENST00000571064 C1orf141Q5JVX7 400 aa28.59■■■□□ 2.17
UBFD1-210ENST00000571064 ADAMTS7Q9UKP4 1686 aa28.58■■■□□ 2.17
UBFD1-210ENST00000571064 USPL1Q5W0Q7 1092 aa28.58■■■□□ 2.17
UBFD1-210ENST00000571064 MIER1Q8N108 512 aa28.58■■■□□ 2.17
UBFD1-210ENST00000571064 RSPH6AQ9H0K4 717 aa28.58■■■□□ 2.17
UBFD1-210ENST00000571064 MRS2Q9HD23 443 aa28.57■■■□□ 2.16
UBFD1-210ENST00000571064 ZPR1O75312 459 aa28.56■■■□□ 2.16
UBFD1-210ENST00000571064 HSPA1AP0DMV8 641 aaKnown RBP28.56■■■□□ 2.16
UBFD1-210ENST00000571064 HSPA1BP0DMV9 641 aaKnown RBP28.56■■■□□ 2.16
UBFD1-210ENST00000571064 VEGFAP15692 232 aaPredicted RBP28.56■■■□□ 2.16
UBFD1-210ENST00000571064 ZC3H4Q9UPT8 1303 aaKnown RBP28.56■■■□□ 2.16
UBFD1-210ENST00000571064 GLTPD2A6NH11 291 aa28.55■■■□□ 2.16
UBFD1-210ENST00000571064 LMNB1P20700 586 aa28.55■■■□□ 2.16
UBFD1-210ENST00000571064 DNAJC10Q8IXB1 793 aa28.55■■■□□ 2.16
UBFD1-210ENST00000571064 NFIXQ14938 502 aa28.53■■■□□ 2.16
UBFD1-210ENST00000571064 SOS1Q07889 1333 aaPredicted RBP28.52■■■□□ 2.16
UBFD1-210ENST00000571064 PRKAR2BP31323 418 aa28.52■■■□□ 2.16
UBFD1-210ENST00000571064 PNISRQ8TF01 805 aaKnown RBP28.52■■■□□ 2.16
UBFD1-210ENST00000571064 ADAMTS8Q9UP79 889 aa28.51■■■□□ 2.15
UBFD1-210ENST00000571064 AFDNP55196 1824 aaKnown RBP28.5■■■□□ 2.15
UBFD1-210ENST00000571064 PHACTR3Q96KR7 559 aa28.5■■■□□ 2.15
UBFD1-210ENST00000571064 WDR43Q15061 677 aaKnown RBP eCLIP28.49■■■□□ 2.15
UBFD1-210ENST00000571064 CCER2I3L3R5 266 aa28.48■■■□□ 2.15
UBFD1-210ENST00000571064 TTLL6Q8N841 843 aa28.48■■■□□ 2.15
UBFD1-210ENST00000571064 PLEKHF1Q96S99 279 aa28.48■■■□□ 2.15
UBFD1-210ENST00000571064 NARFQ9UHQ1 456 aa28.48■■■□□ 2.15
UBFD1-210ENST00000571064 SERPINB2P05120 415 aa28.47■■■□□ 2.15
UBFD1-210ENST00000571064 CYP19A1P11511 503 aaPredicted RBP28.47■■■□□ 2.15
UBFD1-210ENST00000571064 BCL2L12Q9HB09 334 aa28.47■■■□□ 2.15
UBFD1-210ENST00000571064 SCN11AQ9UI33 1791 aa28.47■■■□□ 2.15
UBFD1-210ENST00000571064 NRXN2Q9P2S2 1712 aa28.46■■■□□ 2.15
UBFD1-210ENST00000571064 POTECB2RU33 542 aa28.46■■■□□ 2.15
UBFD1-210ENST00000571064 NFKBIEO00221 500 aa28.46■■■□□ 2.15
UBFD1-210ENST00000571064 MTHFSDQ2M296 383 aaKnown RBP28.46■■■□□ 2.15
UBFD1-210ENST00000571064 C2CD5Q86YS7 1000 aa28.46■■■□□ 2.15
UBFD1-210ENST00000571064 CCDC88AQ3V6T2 1871 aa28.45■■■□□ 2.15
UBFD1-210ENST00000571064 SLC39A6Q13433 755 aa28.45■■■□□ 2.14
UBFD1-210ENST00000571064 LGR6Q9HBX8 967 aa28.45■■■□□ 2.14
UBFD1-210ENST00000571064 TIAM2Q8IVF5 1701 aa28.45■■■□□ 2.14
UBFD1-210ENST00000571064 COL15A1P39059 1388 aa28.45■■■□□ 2.14
UBFD1-210ENST00000571064 DLEC1Q9Y238 1755 aa28.45■■■□□ 2.14
UBFD1-210ENST00000571064 SLC52A2Q9HAB3 445 aa28.44■■■□□ 2.14
UBFD1-210ENST00000571064 ZBTB1Q9Y2K1 713 aa28.44■■■□□ 2.14
UBFD1-210ENST00000571064 CARMIL3Q8ND23 1372 aa28.43■■■□□ 2.14
UBFD1-210ENST00000571064 AKAP4Q5JQC9 854 aa28.42■■■□□ 2.14
UBFD1-210ENST00000571064 H0YIN7 160 aa28.41■■■□□ 2.14
UBFD1-210ENST00000571064 CCDC146Q8IYE0 955 aa28.41■■■□□ 2.14
UBFD1-210ENST00000571064 DPY19L2Q6NUT2 758 aa28.39■■■□□ 2.14
UBFD1-210ENST00000571064 BICDL1Q6ZP65 573 aa28.38■■■□□ 2.13
UBFD1-210ENST00000571064 RNMTO43148 476 aaKnown RBP28.37■■■□□ 2.13
UBFD1-210ENST00000571064 PNNQ9H307 717 aaKnown RBP28.37■■■□□ 2.13
UBFD1-210ENST00000571064 ZNF219Q9P2Y4 722 aaPredicted RBP28.37■■■□□ 2.13
UBFD1-210ENST00000571064 CANXP27824 592 aaKnown RBP28.36■■■□□ 2.13
UBFD1-210ENST00000571064 FAM9BQ8IZU0 186 aa28.36■■■□□ 2.13
UBFD1-210ENST00000571064 GAS2L2Q8NHY3 880 aa28.36■■■□□ 2.13
UBFD1-210ENST00000571064 ERFEQ4G0M1 354 aa28.35■■■□□ 2.13
UBFD1-210ENST00000571064 ZNF622Q969S3 477 aaKnown RBP eCLIP28.35■■■□□ 2.131e-6■■□□□ 12
UBFD1-210ENST00000571064 RUNDC1Q96C34 613 aa28.35■■■□□ 2.13
UBFD1-210ENST00000571064 MKRN1Q9UHC7 482 aaKnown RBP28.35■■■□□ 2.13
UBFD1-210ENST00000571064 MRC1P22897 1456 aa28.34■■■□□ 2.13
UBFD1-210ENST00000571064 C21orf2O43822 256 aa28.34■■■□□ 2.13
UBFD1-210ENST00000571064 CREBZFQ9NS37 354 aa28.33■■■□□ 2.13
UBFD1-210ENST00000571064 MAPK8IP3Q9UPT6 1336 aa28.33■■■□□ 2.13
UBFD1-210ENST00000571064 DLG5Q8TDM6 1919 aa28.33■■■□□ 2.13
UBFD1-210ENST00000571064 POTEIP0CG38 1075 aa28.32■■■□□ 2.12
UBFD1-210ENST00000571064 POTEJP0CG39 1038 aa28.32■■■□□ 2.12
UBFD1-210ENST00000571064 CHADLQ6NUI6 762 aa28.32■■■□□ 2.12
UBFD1-210ENST00000571064 CCDC24Q8N4L8 307 aa28.32■■■□□ 2.12
UBFD1-210ENST00000571064 NFE2L2Q16236 605 aa28.31■■■□□ 2.12
UBFD1-210ENST00000571064 TBC1D9BQ66K14 1250 aa28.31■■■□□ 2.12
UBFD1-210ENST00000571064 VSIG10Q8N0Z9 540 aa28.31■■■□□ 2.12
UBFD1-210ENST00000571064 VIRMAQ69YN4 1812 aaKnown RBP28.31■■■□□ 2.12
UBFD1-210ENST00000571064 ANKRD31Q8N7Z5 1873 aa28.3■■■□□ 2.12
UBFD1-210ENST00000571064 NEFMP07197 916 aa28.29■■■□□ 2.12
UBFD1-210ENST00000571064 EIF5P55010 431 aaKnown RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms