RNA–Protein interactions for RNA: ENST00000570569.1

TMEM256-PLSCR3-201, Transcript of TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 3

Gene TMEM256-PLSCR3, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3-201ENST00000570569 C4AP0C0L4 1744 aa22.55■■□□□ 1.2
TMEM256-PLSCR3-201ENST00000570569 YBX3P16989 372 aaKnown RBP eCLIP22.55■■□□□ 1.28e-10■■■■□ 20.6
TMEM256-PLSCR3-201ENST00000570569 FKBP8Q14318 412 aa22.55■■□□□ 1.2
TMEM256-PLSCR3-201ENST00000570569 PLEKHF1Q96S99 279 aa22.55■■□□□ 1.2
TMEM256-PLSCR3-201ENST00000570569 MAPK8IP3Q9UPT6 1336 aa22.55■■□□□ 1.2
TMEM256-PLSCR3-201ENST00000570569 KCNQ3O43525 872 aa22.54■■□□□ 1.2
TMEM256-PLSCR3-201ENST00000570569 USPL1Q5W0Q7 1092 aa22.54■■□□□ 1.2
TMEM256-PLSCR3-201ENST00000570569 CHD4Q14839 1912 aa22.54■■□□□ 1.2
TMEM256-PLSCR3-201ENST00000570569 TAF7Q15545 349 aaPredicted RBP22.53■■□□□ 1.2
TMEM256-PLSCR3-201ENST00000570569 NFE2L2Q16236 605 aa22.53■■□□□ 1.2
TMEM256-PLSCR3-201ENST00000570569 NARFQ9UHQ1 456 aa22.53■■□□□ 1.2
TMEM256-PLSCR3-201ENST00000570569 COL15A1P39059 1388 aa22.52■■□□□ 1.2
TMEM256-PLSCR3-201ENST00000570569 A0A087WZG4 1122 aa22.51■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 TGFB2P61812 414 aa22.51■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 UTRNP46939 3433 aa22.5■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 EIF5P55010 431 aaKnown RBP22.5■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 NPM2Q86SE8 214 aaKnown RBP22.5■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 SNRPA1P09661 255 aaKnown RBP22.49■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 TM4SF1P30408 202 aa22.49■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 WWC3Q9ULE0 1092 aa22.49■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 ZNF330Q9Y3S2 320 aaPredicted RBP22.49■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 A1BGP04217 495 aa22.48■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 IL6STP40189 918 aaPredicted RBP22.48■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 DDR1Q08345 913 aa22.48■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 PNISRQ8TF01 805 aaKnown RBP22.48■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 C10orf71Q711Q0 1435 aa22.48■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 A0A0G2JLW4 131 aa22.47■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 USP16Q9Y5T5 823 aa22.47■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 POLRMTO00411 1230 aaKnown RBP22.46■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 PRKRIP1Q9H875 184 aaPredicted RBP22.46■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 MIS18AQ9NYP9 233 aa22.46■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 DLG5Q8TDM6 1919 aa22.46■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 KIF13BQ9NQT8 1826 aa22.45■■□□□ 1.19
TMEM256-PLSCR3-201ENST00000570569 NFIXQ14938 502 aa22.45■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 WDR43Q15061 677 aaKnown RBP eCLIP22.45■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 ZNF784Q8NCA9 323 aaPredicted RBP22.45■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 BCL2L12Q9HB09 334 aa22.45■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 GOLGB1Q14789 3259 aaKnown RBP22.45■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 PXDNLA1KZ92 1463 aa22.44■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 DPEP1P16444 411 aa22.44■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 RIPK4P57078 832 aa22.44■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 THUMPD2Q9BTF0 503 aaKnown RBP22.44■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 TBC1D2BQ9UPU7 963 aa22.44■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 PRAMEF22A3QJZ6 481 aa22.43■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 SERPINB2P05120 415 aa22.41■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 BICDL1Q6ZP65 573 aa22.41■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 BCS1LQ9Y276 419 aa22.41■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 N4BP2Q86UW6 1770 aaPredicted RBP22.4■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 TMPOP42166 694 aaKnown RBP22.4■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 LMOD3Q0VAK6 560 aa22.4■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 CCDC146Q8IYE0 955 aa22.4■■□□□ 1.18
TMEM256-PLSCR3-201ENST00000570569 PIP4K2AP48426 406 aaPredicted RBP22.39■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 DZIP3Q86Y13 1208 aaKnown RBP22.39■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 RUNDC1Q96C34 613 aa22.39■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 PIM2Q9P1W9 311 aa22.38■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 ADAMTS8Q9UP79 889 aa22.38■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 KIAA1551Q9HCM1 1747 aa22.37■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 CAMTA2O94983 1202 aa22.37■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 KCNA3P22001 575 aa22.37■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 EIF4A1P60842 406 aaKnown RBP22.37■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 TBC1D9BQ66K14 1250 aa22.37■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 GIGYF1O75420 1035 aaPredicted RBP22.36■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 NEUROD2Q15784 382 aa22.36■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 RRP7AQ9Y3A4 280 aaKnown RBP22.36■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 NBPF26B4DH59 902 aa22.35■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 CHRNA5P30532 468 aa22.35■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 NBPF10Q6P3W6 841 aaKnown RBP22.35■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 NBPF15Q8N660 670 aa22.35■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 SETDB2Q96T68 719 aa22.35■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 TSPYL4Q9UJ04 414 aa22.35■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 AFDNP55196 1824 aaKnown RBP22.34■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 ZNF316A6NFI3 1004 aaPredicted RBP22.34■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 DALRD3Q5D0E6 543 aaKnown RBP22.34■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 ARHGAP27Q6ZUM4 889 aa22.34■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 BABAM1Q9NWV8 329 aa22.34■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 KDM3BQ7LBC6 1761 aa22.33■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 CLEC4GQ6UXB4 293 aa22.33■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 ZNF652Q9Y2D9 606 aa22.33■■□□□ 1.17
TMEM256-PLSCR3-201ENST00000570569 CARMIL3Q8ND23 1372 aa22.32■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 SCN7AQ01118 1682 aa22.31■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 NPHP1O15259 732 aa22.31■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 NRXN2Q9P2S2 1712 aa22.31■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 BRCA1P38398 1863 aaKnown RBP22.29■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 H0YIN7 160 aa22.29■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 PRR5LQ6MZQ0 368 aa22.29■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 C2CD5Q86YS7 1000 aa22.29■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 NGEFQ8N5V2 710 aa22.29■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 BRIP1Q9BX63 1249 aa22.29■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 RGL2O15211 777 aa22.28■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 CNBD1Q8NA66 436 aa22.28■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 TRIM35Q9UPQ4 493 aa22.28■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 PDZRN3Q9UPQ7 1066 aa22.28■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 LAMB4A4D0S4 1761 aa22.27■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 PDE6BP35913 854 aa22.27■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 ATP10DQ9P241 1426 aa22.27■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 LAS1LQ9Y4W2 734 aaKnown RBP22.27■■□□□ 1.16
TMEM256-PLSCR3-201ENST00000570569 MYL6BP14649 208 aa22.26■■□□□ 1.15
TMEM256-PLSCR3-201ENST00000570569 ST5P78524 1137 aa22.26■■□□□ 1.15
TMEM256-PLSCR3-201ENST00000570569 NBPF5PQ86XG9 351 aaPredicted RBP22.26■■□□□ 1.15
TMEM256-PLSCR3-201ENST00000570569 CCDC24Q8N4L8 307 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms