RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 LOC102724428A0A0B4J2F2 783 aa19.7■□□□□ 0.74
HERPUD1-219ENST00000570273 SIK1P57059 783 aa19.7■□□□□ 0.74
HERPUD1-219ENST00000570273 SLC4A9Q96Q91 983 aa19.7■□□□□ 0.74
HERPUD1-219ENST00000570273 TEX13AQ9BXU3 409 aaPredicted RBP19.7■□□□□ 0.74
HERPUD1-219ENST00000570273 NOB1Q9ULX3 412 aaKnown RBP19.7■□□□□ 0.74
HERPUD1-219ENST00000570273 IPO8O15397 1037 aaKnown RBP19.69■□□□□ 0.74
HERPUD1-219ENST00000570273 IRX6P78412 446 aaPredicted RBP19.69■□□□□ 0.74
HERPUD1-219ENST00000570273 ZKSCAN2Q63HK3 967 aa19.69■□□□□ 0.74
HERPUD1-219ENST00000570273 DBF4Q9UBU7 674 aaPredicted RBP19.69■□□□□ 0.74
HERPUD1-219ENST00000570273 TJP1Q07157 1748 aa19.69■□□□□ 0.74
HERPUD1-219ENST00000570273 STARD3NLO95772 234 aa19.68■□□□□ 0.74
HERPUD1-219ENST00000570273 ANXA1P04083 346 aa19.68■□□□□ 0.74
HERPUD1-219ENST00000570273 ATP6V1AP38606 617 aa19.68■□□□□ 0.74
HERPUD1-219ENST00000570273 ERBB4Q15303 1308 aa19.67■□□□□ 0.74
HERPUD1-219ENST00000570273 PROSER3Q2NL68 480 aa19.67■□□□□ 0.74
HERPUD1-219ENST00000570273 G2E3Q7L622 706 aa19.67■□□□□ 0.74
HERPUD1-219ENST00000570273 CCDC125Q86Z20 511 aa19.67■□□□□ 0.74
HERPUD1-219ENST00000570273 DDX21Q9NR30 783 aaKnown RBP eCLIP19.67■□□□□ 0.74
HERPUD1-219ENST00000570273 CICQ96RK0 1608 aaPredicted RBP19.66■□□□□ 0.74
HERPUD1-219ENST00000570273 FLIIQ13045 1269 aa19.66■□□□□ 0.74
HERPUD1-219ENST00000570273 ATF7IPQ6VMQ6 1270 aa19.66■□□□□ 0.74
HERPUD1-219ENST00000570273 HYPKQ9NX55 129 aa19.66■□□□□ 0.74
HERPUD1-219ENST00000570273 PTPRCP08575 1304 aa19.66■□□□□ 0.74
HERPUD1-219ENST00000570273 TRIM27P14373 513 aa19.65■□□□□ 0.74
HERPUD1-219ENST00000570273 MYL6BP14649 208 aa19.65■□□□□ 0.74
HERPUD1-219ENST00000570273 C20orf194Q5TEA3 1177 aa19.65■□□□□ 0.74
HERPUD1-219ENST00000570273 FTSJ3Q8IY81 847 aaKnown RBP19.65■□□□□ 0.74
HERPUD1-219ENST00000570273 ARHGAP45Q92619 1136 aa19.65■□□□□ 0.74
HERPUD1-219ENST00000570273 API5Q9BZZ5 524 aaKnown RBP19.65■□□□□ 0.74
HERPUD1-219ENST00000570273 TNNQ9UQP3 1299 aa19.65■□□□□ 0.74
HERPUD1-219ENST00000570273 A1BGP04217 495 aa19.64■□□□□ 0.73
HERPUD1-219ENST00000570273 CYP19A1P11511 503 aaPredicted RBP19.64■□□□□ 0.73
HERPUD1-219ENST00000570273 MS4A1P11836 297 aa19.64■□□□□ 0.73
HERPUD1-219ENST00000570273 PIP4K2AP48426 406 aaPredicted RBP19.64■□□□□ 0.73
HERPUD1-219ENST00000570273 ITPK1Q13572 414 aa19.64■□□□□ 0.73
HERPUD1-219ENST00000570273 PDIA6Q15084 440 aa19.64■□□□□ 0.73
HERPUD1-219ENST00000570273 PHAXQ9H814 394 aaKnown RBP19.64■□□□□ 0.73
HERPUD1-219ENST00000570273 CCNL1Q9UK58 526 aaPredicted RBP19.64■□□□□ 0.73
HERPUD1-219ENST00000570273 ZNF831Q5JPB2 1677 aa19.64■□□□□ 0.73
HERPUD1-219ENST00000570273 FKBP5Q13451 457 aaPredicted RBP19.63■□□□□ 0.73
HERPUD1-219ENST00000570273 DZIP1LQ8IYY4 767 aaKnown RBP19.63■□□□□ 0.73
HERPUD1-219ENST00000570273 CLUAP1Q96AJ1 413 aa19.63■□□□□ 0.73
HERPUD1-219ENST00000570273 NBPF26B4DH59 902 aa19.62■□□□□ 0.73
HERPUD1-219ENST00000570273 LY75O60449 1722 aa19.62■□□□□ 0.73
HERPUD1-219ENST00000570273 FKBP8Q14318 412 aa19.62■□□□□ 0.73
HERPUD1-219ENST00000570273 PDE3AQ14432 1141 aa19.62■□□□□ 0.73
HERPUD1-219ENST00000570273 NBPF14Q5TI25 921 aa19.62■□□□□ 0.73
HERPUD1-219ENST00000570273 NBPF10Q6P3W6 841 aaKnown RBP19.62■□□□□ 0.73
HERPUD1-219ENST00000570273 NBPF15Q8N660 670 aa19.62■□□□□ 0.73
HERPUD1-219ENST00000570273 PANK1Q8TE04 598 aa19.62■□□□□ 0.73
HERPUD1-219ENST00000570273 RGPD3A6NKT7 1758 aaPredicted RBP19.61■□□□□ 0.73
HERPUD1-219ENST00000570273 RGPD4Q7Z3J3 1758 aa19.61■□□□□ 0.73
HERPUD1-219ENST00000570273 CACNA1FO60840 1977 aa19.6■□□□□ 0.73
HERPUD1-219ENST00000570273 RLBP1P12271 317 aa19.6■□□□□ 0.73
HERPUD1-219ENST00000570273 KCNQ4P56696 695 aa19.6■□□□□ 0.73
HERPUD1-219ENST00000570273 LINC00116Q8NCU8 138 aa19.6■□□□□ 0.73
HERPUD1-219ENST00000570273 XAGE3Q8WTP9 111 aa19.6■□□□□ 0.73
HERPUD1-219ENST00000570273 CCDC87Q9NVE4 849 aa19.6■□□□□ 0.73
HERPUD1-219ENST00000570273 ABCC4O15439 1325 aa19.6■□□□□ 0.73
HERPUD1-219ENST00000570273 APBA3O96018 575 aa19.59■□□□□ 0.73
HERPUD1-219ENST00000570273 CRKLP46109 303 aaKnown RBP19.59■□□□□ 0.73
HERPUD1-219ENST00000570273 AIMP1Q12904 312 aaKnown RBP19.59■□□□□ 0.73
HERPUD1-219ENST00000570273 CRBNQ96SW2 442 aa19.59■□□□□ 0.73
HERPUD1-219ENST00000570273 ZBTB1Q9Y2K1 713 aa19.59■□□□□ 0.73
HERPUD1-219ENST00000570273 COL5A3P25940 1745 aaPredicted RBP19.59■□□□□ 0.73
HERPUD1-219ENST00000570273 LRP10Q7Z4F1 713 aa19.59■□□□□ 0.73
HERPUD1-219ENST00000570273 ZNF330Q9Y3S2 320 aaPredicted RBP19.59■□□□□ 0.73
HERPUD1-219ENST00000570273 DDX58O95786 925 aaKnown RBP19.58■□□□□ 0.72
HERPUD1-219ENST00000570273 COPS6Q7L5N1 327 aa19.58■□□□□ 0.72
HERPUD1-219ENST00000570273 COG6Q9Y2V7 657 aa19.58■□□□□ 0.72
HERPUD1-219ENST00000570273 GTF3C3Q9Y5Q9 886 aa19.58■□□□□ 0.72
HERPUD1-219ENST00000570273 RREB1Q92766 1687 aa19.57■□□□□ 0.72
HERPUD1-219ENST00000570273 CNTNAP4Q9C0A0 1308 aa19.57■□□□□ 0.72
HERPUD1-219ENST00000570273 F6X3S4 739 aa19.57■□□□□ 0.72
HERPUD1-219ENST00000570273 SLC27A3Q5K4L6 730 aa19.57■□□□□ 0.72
HERPUD1-219ENST00000570273 TMEM57Q8N5G2 664 aa19.57■□□□□ 0.72
HERPUD1-219ENST00000570273 INTS5Q6P9B9 1019 aaKnown RBP19.56■□□□□ 0.72
HERPUD1-219ENST00000570273 ITPRIPQ8IWB1 547 aa19.56■□□□□ 0.72
HERPUD1-219ENST00000570273 EXOC6Q8TAG9 804 aa19.56■□□□□ 0.72
HERPUD1-219ENST00000570273 ADCY9O60503 1353 aa19.56■□□□□ 0.72
HERPUD1-219ENST00000570273 PXDNLA1KZ92 1463 aa19.55■□□□□ 0.72
HERPUD1-219ENST00000570273 PLSCR1O15162 318 aa19.55■□□□□ 0.72
HERPUD1-219ENST00000570273 IL6STP40189 918 aaPredicted RBP19.55■□□□□ 0.72
HERPUD1-219ENST00000570273 SLC4A10Q6U841 1118 aa19.55■□□□□ 0.72
HERPUD1-219ENST00000570273 PI4KAP2A4QPH2 592 aa19.54■□□□□ 0.72
HERPUD1-219ENST00000570273 MVPQ14764 893 aaKnown RBP19.54■□□□□ 0.72
HERPUD1-219ENST00000570273 TXNRD1Q16881 649 aa19.54■□□□□ 0.72
HERPUD1-219ENST00000570273 KSR2Q6VAB6 950 aa19.54■□□□□ 0.72
HERPUD1-219ENST00000570273 NPM2Q86SE8 214 aaKnown RBP19.54■□□□□ 0.72
HERPUD1-219ENST00000570273 PI4KAP1Q8N8J0 262 aa19.54■□□□□ 0.72
HERPUD1-219ENST00000570273 DNAAF4Q8WXU2 420 aa19.54■□□□□ 0.72
HERPUD1-219ENST00000570273 LRRC4BQ9NT99 713 aa19.54■□□□□ 0.72
HERPUD1-219ENST00000570273 SF3B2Q13435 895 aaKnown RBP19.53■□□□□ 0.72
HERPUD1-219ENST00000570273 RC3H1Q5TC82 1133 aaKnown RBP19.53■□□□□ 0.72
HERPUD1-219ENST00000570273 KIF6Q6ZMV9 814 aa19.53■□□□□ 0.72
HERPUD1-219ENST00000570273 TTLL7Q6ZT98 887 aa19.53■□□□□ 0.72
HERPUD1-219ENST00000570273 RIC3Q7Z5B4 369 aa19.53■□□□□ 0.72
HERPUD1-219ENST00000570273 DEFB132Q7Z7B7 95 aa19.53■□□□□ 0.72
HERPUD1-219ENST00000570273 MAP3K2Q9Y2U5 619 aa19.53■□□□□ 0.72
HERPUD1-219ENST00000570273 C4BP0C0L5 1744 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms