RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 K7ELQ4 463 aaPredicted RBP11.11□□□□□ -0.63
CHD9-220ENST00000569794 GNB5O14775 395 aa11.11□□□□□ -0.63
CHD9-220ENST00000569794 ZNF295-AS1Q8N0V1 137 aa11.11□□□□□ -0.63
CHD9-220ENST00000569794 AIDAQ96BJ3 306 aa11.11□□□□□ -0.63
CHD9-220ENST00000569794 NEURL1BA8MQ27 555 aa11.1□□□□□ -0.63
CHD9-220ENST00000569794 ATXN7O15265 892 aaPredicted RBP11.1□□□□□ -0.63
CHD9-220ENST00000569794 ABL2P42684 1182 aa11.1□□□□□ -0.63
CHD9-220ENST00000569794 XP32Q5T750 250 aa11.1□□□□□ -0.63
CHD9-220ENST00000569794 HCN2Q9UL51 889 aa11.1□□□□□ -0.63
CHD9-220ENST00000569794 PIK3R2O00459 728 aa11.09□□□□□ -0.63
CHD9-220ENST00000569794 DGKGP49619 791 aa11.09□□□□□ -0.63
CHD9-220ENST00000569794 WASHC4Q2M389 1173 aa11.09□□□□□ -0.63
CHD9-220ENST00000569794 SLC4A9Q96Q91 983 aa11.09□□□□□ -0.63
CHD9-220ENST00000569794 IQSEC3Q9UPP2 1182 aaPredicted RBP11.09□□□□□ -0.63
CHD9-220ENST00000569794 A0A1W2PNR3 127 aa11.08□□□□□ -0.64
CHD9-220ENST00000569794 TMEM229AB2RXF0 380 aa11.08□□□□□ -0.64
CHD9-220ENST00000569794 TNP2Q05952 138 aa11.08□□□□□ -0.64
CHD9-220ENST00000569794 SERTAD1Q9UHV2 236 aa11.08□□□□□ -0.64
CHD9-220ENST00000569794 DCDC2BA2VCK2 349 aa11.07□□□□□ -0.64
CHD9-220ENST00000569794 CDK2AP1O14519 115 aa11.07□□□□□ -0.64
CHD9-220ENST00000569794 MAPTP10636 758 aaKnown RBP11.07□□□□□ -0.64
CHD9-220ENST00000569794 MTFR1Q15390 333 aa11.07□□□□□ -0.64
CHD9-220ENST00000569794 NBPF1Q3BBV0 1214 aa11.07□□□□□ -0.64
CHD9-220ENST00000569794 ARSJQ5FYB0 599 aaPredicted RBP11.07□□□□□ -0.64
CHD9-220ENST00000569794 FAM182BQ5T319 152 aa11.07□□□□□ -0.64
CHD9-220ENST00000569794 A6NJY4 79 aa11.06□□□□□ -0.64
CHD9-220ENST00000569794 CD33P20138 364 aa11.06□□□□□ -0.64
CHD9-220ENST00000569794 SEMA3FQ13275 785 aa11.06□□□□□ -0.64
CHD9-220ENST00000569794 KLF15Q9UIH9 416 aa11.06□□□□□ -0.64
CHD9-220ENST00000569794 FURINP09958 794 aa11.05□□□□□ -0.64
CHD9-220ENST00000569794 ADH6P28332 368 aa11.05□□□□□ -0.64
CHD9-220ENST00000569794 SOX11P35716 441 aa11.05□□□□□ -0.64
CHD9-220ENST00000569794 CHSY3Q70JA7 882 aa11.05□□□□□ -0.64
CHD9-220ENST00000569794 AVENQ9NQS1 362 aaPredicted RBP11.05□□□□□ -0.64
CHD9-220ENST00000569794 ZDHHC3Q9NYG2 299 aa11.05□□□□□ -0.64
CHD9-220ENST00000569794 USP3Q9Y6I4 520 aa11.05□□□□□ -0.64
CHD9-220ENST00000569794 C1QTNF9BB2RNN3 333 aa11.04□□□□□ -0.64
CHD9-220ENST00000569794 TATP17735 454 aaPredicted RBP11.04□□□□□ -0.64
CHD9-220ENST00000569794 NOP53Q9NZM5 478 aaKnown RBP11.04□□□□□ -0.64
CHD9-220ENST00000569794 KHNYNO15037 678 aaKnown RBP11.03□□□□□ -0.64
CHD9-220ENST00000569794 CD163Q86VB7 1156 aa11.03□□□□□ -0.64
CHD9-220ENST00000569794 FCHSD1Q86WN1 690 aa11.03□□□□□ -0.64
CHD9-220ENST00000569794 ZIC5Q96T25 663 aa11.03□□□□□ -0.64
CHD9-220ENST00000569794 PCDHGA11Q9Y5H2 935 aa11.03□□□□□ -0.64
CHD9-220ENST00000569794 FAM157BP0CG42 384 aa11.02□□□□□ -0.65
CHD9-220ENST00000569794 PIK3CDO00329 1044 aa11.01□□□□□ -0.65
CHD9-220ENST00000569794 CABP1Q9NZU7 370 aa11.01□□□□□ -0.65
CHD9-220ENST00000569794 MCM6Q14566 821 aa11□□□□□ -0.65
CHD9-220ENST00000569794 TPRNQ4KMQ1 711 aa11□□□□□ -0.65
CHD9-220ENST00000569794 SAMD5Q5TGI4 173 aa11□□□□□ -0.65
CHD9-220ENST00000569794 ZNF468Q5VIY5 522 aaPredicted RBP11□□□□□ -0.65
CHD9-220ENST00000569794 CHRNA4P43681 627 aa10.99□□□□□ -0.65
CHD9-220ENST00000569794 PCBP4P57723 403 aaKnown RBP10.99□□□□□ -0.65
CHD9-220ENST00000569794 GJA3Q9Y6H8 435 aa10.99□□□□□ -0.65
CHD9-220ENST00000569794 STRN4Q9NRL3 753 aa10.98□□□□□ -0.65
CHD9-220ENST00000569794 PARP3Q9Y6F1 533 aa10.98□□□□□ -0.65
CHD9-220ENST00000569794 BACH1O14867 736 aa10.97□□□□□ -0.65
CHD9-220ENST00000569794 EFSO43281 561 aa10.97□□□□□ -0.65
CHD9-220ENST00000569794 EML3Q32P44 896 aa10.97□□□□□ -0.65
CHD9-220ENST00000569794 BICDL1Q6ZP65 573 aa10.97□□□□□ -0.65
CHD9-220ENST00000569794 MARK1Q9P0L2 795 aa10.97□□□□□ -0.65
CHD9-220ENST00000569794 PRR12Q9ULL5 1215 aa10.97□□□□□ -0.65
CHD9-220ENST00000569794 LAMC2Q13753 1193 aa10.96□□□□□ -0.65
CHD9-220ENST00000569794 ZDHHC1Q8WTX9 485 aa10.96□□□□□ -0.65
CHD9-220ENST00000569794 TRIM11Q96F44 468 aa10.96□□□□□ -0.65
CHD9-220ENST00000569794 SCHIP1Q9P0W5 487 aaPredicted RBP10.96□□□□□ -0.65
CHD9-220ENST00000569794 NOD1Q9Y239 953 aa10.96□□□□□ -0.65
CHD9-220ENST00000569794 TXLNAP40222 546 aa10.95□□□□□ -0.66
CHD9-220ENST00000569794 GTF2IP78347 998 aa10.95□□□□□ -0.66
CHD9-220ENST00000569794 SKIP12755 728 aa10.94□□□□□ -0.66
CHD9-220ENST00000569794 ZNF358Q9NW07 568 aa10.94□□□□□ -0.66
CHD9-220ENST00000569794 LZTS3O60299 673 aaPredicted RBP10.93□□□□□ -0.66
CHD9-220ENST00000569794 Q8N3U1 123 aa10.93□□□□□ -0.66
CHD9-220ENST00000569794 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.93□□□□□ -0.66
CHD9-220ENST00000569794 NFATC2IPQ8NCF5 419 aa10.93□□□□□ -0.66
CHD9-220ENST00000569794 L3MBTL2Q969R5 705 aa10.93□□□□□ -0.66
CHD9-220ENST00000569794 ALG2Q9H553 416 aa10.93□□□□□ -0.66
CHD9-220ENST00000569794 COG6Q9Y2V7 657 aa10.93□□□□□ -0.66
CHD9-220ENST00000569794 EPHA4P54764 986 aa10.92□□□□□ -0.66
CHD9-220ENST00000569794 TEAD4Q15561 434 aa10.92□□□□□ -0.66
CHD9-220ENST00000569794 MDFIQ99750 246 aa10.92□□□□□ -0.66
CHD9-220ENST00000569794 PLVAPQ9BX97 442 aa10.92□□□□□ -0.66
CHD9-220ENST00000569794 ELOA3CA0A087WX78 387 aaPredicted RBP10.91□□□□□ -0.66
CHD9-220ENST00000569794 ELOA3DA6NLF2 546 aaPredicted RBP10.91□□□□□ -0.66
CHD9-220ENST00000569794 PSME1Q06323 249 aa10.91□□□□□ -0.66
CHD9-220ENST00000569794 NCOA4Q13772 614 aa10.91□□□□□ -0.66
CHD9-220ENST00000569794 ELOA3BQ3SY89 546 aa10.91□□□□□ -0.66
CHD9-220ENST00000569794 ELOA3Q8NG57 546 aa10.91□□□□□ -0.66
CHD9-220ENST00000569794 EML1O00423 815 aa10.9□□□□□ -0.66
CHD9-220ENST00000569794 NOS2P35228 1153 aa10.9□□□□□ -0.66
CHD9-220ENST00000569794 LRRC69Q6ZNQ3 347 aa10.9□□□□□ -0.66
CHD9-220ENST00000569794 SYT9Q86SS6 491 aa10.9□□□□□ -0.66
CHD9-220ENST00000569794 SPATA31C1P0DKV0 1188 aa10.89□□□□□ -0.67
CHD9-220ENST00000569794 SLC9A9Q8IVB4 645 aa10.89□□□□□ -0.67
CHD9-220ENST00000569794 C7orf43Q8WVR3 580 aa10.89□□□□□ -0.67
CHD9-220ENST00000569794 GPC6Q9Y625 555 aaPredicted RBP10.89□□□□□ -0.67
CHD9-220ENST00000569794 SIN3BO75182 1162 aa10.88□□□□□ -0.67
CHD9-220ENST00000569794 ALAS2P22557 587 aa10.88□□□□□ -0.67
CHD9-220ENST00000569794 ITGB7P26010 798 aa10.88□□□□□ -0.67
CHD9-220ENST00000569794 DOC2BQ14184 412 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms