RNA–Protein interactions for RNA: ENST00000569637.6

NIP7-208, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 2 BASIC

Gene NIP7, Length 1,099 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-208ENST00000569637 KDM3BQ7LBC6 1761 aa19.62■□□□□ 0.73
NIP7-208ENST00000569637 MAPK8IP3Q9UPT6 1336 aa19.61■□□□□ 0.73
NIP7-208ENST00000569637 ZPR1O75312 459 aa19.61■□□□□ 0.73
NIP7-208ENST00000569637 PLEKHF1Q96S99 279 aa19.61■□□□□ 0.73
NIP7-208ENST00000569637 SRP68Q9UHB9 627 aaKnown RBP19.61■□□□□ 0.73
NIP7-208ENST00000569637 ZBTB1Q9Y2K1 713 aa19.61■□□□□ 0.73
NIP7-208ENST00000569637 PARP3Q9Y6F1 533 aa19.61■□□□□ 0.73
NIP7-208ENST00000569637 SCN7AQ01118 1682 aa19.61■□□□□ 0.73
NIP7-208ENST00000569637 C10orf71Q711Q0 1435 aa19.6■□□□□ 0.73
NIP7-208ENST00000569637 LAMB4A4D0S4 1761 aa19.6■□□□□ 0.73
NIP7-208ENST00000569637 GRIN3BO60391 1043 aa19.6■□□□□ 0.73
NIP7-208ENST00000569637 BRCA1P38398 1863 aaKnown RBP19.6■□□□□ 0.73
NIP7-208ENST00000569637 AFDNP55196 1824 aaKnown RBP19.59■□□□□ 0.73
NIP7-208ENST00000569637 YBX3P16989 372 aaKnown RBP eCLIP19.58■□□□□ 0.72
NIP7-208ENST00000569637 DCTN1Q14203 1278 aa19.58■□□□□ 0.72
NIP7-208ENST00000569637 FKBP8Q14318 412 aa19.58■□□□□ 0.72
NIP7-208ENST00000569637 BCORQ6W2J9 1755 aa19.57■□□□□ 0.72
NIP7-208ENST00000569637 PXDNLA1KZ92 1463 aa19.57■□□□□ 0.72
NIP7-208ENST00000569637 CANXP27824 592 aaKnown RBP19.57■□□□□ 0.72
NIP7-208ENST00000569637 NFE2L2Q16236 605 aa19.57■□□□□ 0.72
NIP7-208ENST00000569637 USPL1Q5W0Q7 1092 aa19.57■□□□□ 0.72
NIP7-208ENST00000569637 NARFQ9UHQ1 456 aa19.57■□□□□ 0.72
NIP7-208ENST00000569637 NRXN2Q9P2S2 1712 aa19.56■□□□□ 0.72
NIP7-208ENST00000569637 A0A087WZG4 1122 aa19.56■□□□□ 0.72
NIP7-208ENST00000569637 KCNQ3O43525 872 aa19.56■□□□□ 0.72
NIP7-208ENST00000569637 TGFB2P61812 414 aa19.55■□□□□ 0.72
NIP7-208ENST00000569637 TAF7Q15545 349 aaPredicted RBP19.55■□□□□ 0.72
NIP7-208ENST00000569637 EIF5P55010 431 aaKnown RBP19.54■□□□□ 0.72
NIP7-208ENST00000569637 ARFGEF1Q9Y6D6 1849 aa19.53■□□□□ 0.72
NIP7-208ENST00000569637 SNRPA1P09661 255 aaKnown RBP19.53■□□□□ 0.72
NIP7-208ENST00000569637 IL6STP40189 918 aaPredicted RBP19.53■□□□□ 0.72
NIP7-208ENST00000569637 DDR1Q08345 913 aa19.53■□□□□ 0.72
NIP7-208ENST00000569637 NPM2Q86SE8 214 aaKnown RBP19.53■□□□□ 0.72
NIP7-208ENST00000569637 PNISRQ8TF01 805 aaKnown RBP19.53■□□□□ 0.72
NIP7-208ENST00000569637 PRKRIP1Q9H875 184 aaPredicted RBP19.53■□□□□ 0.72
NIP7-208ENST00000569637 POLRMTO00411 1230 aaKnown RBP19.52■□□□□ 0.72
NIP7-208ENST00000569637 TM4SF1P30408 202 aa19.52■□□□□ 0.72
NIP7-208ENST00000569637 DLEC1Q9Y238 1755 aa19.52■□□□□ 0.71
NIP7-208ENST00000569637 ZNF330Q9Y3S2 320 aaPredicted RBP19.51■□□□□ 0.71
NIP7-208ENST00000569637 UTRNP46939 3433 aa19.51■□□□□ 0.71
NIP7-208ENST00000569637 A1BGP04217 495 aa19.5■□□□□ 0.71
NIP7-208ENST00000569637 WDR43Q15061 677 aaKnown RBP eCLIP19.5■□□□□ 0.71
NIP7-208ENST00000569637 NFIXQ14938 502 aa19.49■□□□□ 0.71
NIP7-208ENST00000569637 ZNF784Q8NCA9 323 aaPredicted RBP19.49■□□□□ 0.71
NIP7-208ENST00000569637 BCL2L12Q9HB09 334 aa19.49■□□□□ 0.71
NIP7-208ENST00000569637 WWC3Q9ULE0 1092 aa19.49■□□□□ 0.71
NIP7-208ENST00000569637 USP16Q9Y5T5 823 aa19.49■□□□□ 0.71
NIP7-208ENST00000569637 A0A0G2JLW4 131 aa19.48■□□□□ 0.71
NIP7-208ENST00000569637 PRAMEF22A3QJZ6 481 aa19.48■□□□□ 0.71
NIP7-208ENST00000569637 RIPK4P57078 832 aa19.48■□□□□ 0.71
NIP7-208ENST00000569637 LMOD3Q0VAK6 560 aa19.48■□□□□ 0.71
NIP7-208ENST00000569637 MIS18AQ9NYP9 233 aa19.48■□□□□ 0.71
NIP7-208ENST00000569637 DPEP1P16444 411 aa19.47■□□□□ 0.71
NIP7-208ENST00000569637 THUMPD2Q9BTF0 503 aaKnown RBP19.47■□□□□ 0.71
NIP7-208ENST00000569637 TMPOP42166 694 aaKnown RBP19.46■□□□□ 0.71
NIP7-208ENST00000569637 TBC1D2BQ9UPU7 963 aa19.46■□□□□ 0.71
NIP7-208ENST00000569637 ANKRD31Q8N7Z5 1873 aa19.45■□□□□ 0.7
NIP7-208ENST00000569637 SERPINB2P05120 415 aa19.45■□□□□ 0.7
NIP7-208ENST00000569637 RUNDC1Q96C34 613 aa19.45■□□□□ 0.7
NIP7-208ENST00000569637 BCS1LQ9Y276 419 aa19.45■□□□□ 0.7
NIP7-208ENST00000569637 BICDL1Q6ZP65 573 aa19.44■□□□□ 0.7
NIP7-208ENST00000569637 DZIP3Q86Y13 1208 aaKnown RBP19.44■□□□□ 0.7
NIP7-208ENST00000569637 CCDC146Q8IYE0 955 aa19.44■□□□□ 0.7
NIP7-208ENST00000569637 GOLGB1Q14789 3259 aaKnown RBP19.44■□□□□ 0.7
NIP7-208ENST00000569637 CARMIL3Q8ND23 1372 aa19.44■□□□□ 0.7
NIP7-208ENST00000569637 CAMTA2O94983 1202 aa19.43■□□□□ 0.7
NIP7-208ENST00000569637 PIP4K2AP48426 406 aaPredicted RBP19.43■□□□□ 0.7
NIP7-208ENST00000569637 EIF4A1P60842 406 aaKnown RBP19.43■□□□□ 0.7
NIP7-208ENST00000569637 TBC1D9BQ66K14 1250 aa19.43■□□□□ 0.7
NIP7-208ENST00000569637 PIM2Q9P1W9 311 aa19.43■□□□□ 0.7
NIP7-208ENST00000569637 GIGYF1O75420 1035 aaPredicted RBP19.42■□□□□ 0.7
NIP7-208ENST00000569637 KCNA3P22001 575 aa19.42■□□□□ 0.7
NIP7-208ENST00000569637 BABAM1Q9NWV8 329 aa19.42■□□□□ 0.7
NIP7-208ENST00000569637 TSPYL4Q9UJ04 414 aa19.42■□□□□ 0.7
NIP7-208ENST00000569637 ADAMTS8Q9UP79 889 aa19.42■□□□□ 0.7
NIP7-208ENST00000569637 NUP98P52948 1817 aa19.41■□□□□ 0.7
NIP7-208ENST00000569637 ZNF652Q9Y2D9 606 aa19.41■□□□□ 0.7
NIP7-208ENST00000569637 RRP7AQ9Y3A4 280 aaKnown RBP19.41■□□□□ 0.7
NIP7-208ENST00000569637 COL11A2P13942 1736 aaPredicted RBP19.4■□□□□ 0.7
NIP7-208ENST00000569637 ZNF316A6NFI3 1004 aaPredicted RBP19.4■□□□□ 0.7
NIP7-208ENST00000569637 NBPF26B4DH59 902 aa19.4■□□□□ 0.7
NIP7-208ENST00000569637 CHRNA5P30532 468 aa19.4■□□□□ 0.7
NIP7-208ENST00000569637 NEUROD2Q15784 382 aa19.4■□□□□ 0.7
NIP7-208ENST00000569637 NBPF10Q6P3W6 841 aaKnown RBP19.4■□□□□ 0.7
NIP7-208ENST00000569637 CLEC4GQ6UXB4 293 aa19.4■□□□□ 0.7
NIP7-208ENST00000569637 NBPF15Q8N660 670 aa19.4■□□□□ 0.7
NIP7-208ENST00000569637 SETDB2Q96T68 719 aa19.4■□□□□ 0.7
NIP7-208ENST00000569637 RGL2O15211 777 aa19.39■□□□□ 0.69
NIP7-208ENST00000569637 DALRD3Q5D0E6 543 aaKnown RBP19.39■□□□□ 0.69
NIP7-208ENST00000569637 ADCY9O60503 1353 aa19.39■□□□□ 0.69
NIP7-208ENST00000569637 CACNA1SQ13698 1873 aa19.39■□□□□ 0.69
NIP7-208ENST00000569637 ATP10DQ9P241 1426 aa19.38■□□□□ 0.69
NIP7-208ENST00000569637 ARFGEF2Q9Y6D5 1785 aa19.37■□□□□ 0.69
NIP7-208ENST00000569637 SBF1O95248 1867 aa19.37■□□□□ 0.69
NIP7-208ENST00000569637 ERBB4Q15303 1308 aa19.36■□□□□ 0.69
NIP7-208ENST00000569637 NPHP1O15259 732 aa19.36■□□□□ 0.69
NIP7-208ENST00000569637 PRR5LQ6MZQ0 368 aa19.36■□□□□ 0.69
NIP7-208ENST00000569637 ARHGAP27Q6ZUM4 889 aa19.36■□□□□ 0.69
NIP7-208ENST00000569637 CNBD1Q8NA66 436 aa19.36■□□□□ 0.69
NIP7-208ENST00000569637 PDZRN3Q9UPQ7 1066 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms