RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 ZPR1O75312 459 aa12.34□□□□□ -0.43
UBR1-210ENST00000569337 TAF7Q15545 349 aaPredicted RBP12.34□□□□□ -0.43
UBR1-210ENST00000569337 NFE2L2Q16236 605 aa12.34□□□□□ -0.43
UBR1-210ENST00000569337 ADAMTS7Q9UKP4 1686 aa12.34□□□□□ -0.43
UBR1-210ENST00000569337 KCPQ6ZWJ8 1503 aa12.33□□□□□ -0.44
UBR1-210ENST00000569337 KCNQ3O43525 872 aa12.33□□□□□ -0.44
UBR1-210ENST00000569337 CANXP27824 592 aaKnown RBP12.33□□□□□ -0.44
UBR1-210ENST00000569337 SRP68Q9UHB9 627 aaKnown RBP12.33□□□□□ -0.44
UBR1-210ENST00000569337 ZBTB1Q9Y2K1 713 aa12.33□□□□□ -0.44
UBR1-210ENST00000569337 RRP7AQ9Y3A4 280 aaKnown RBP12.33□□□□□ -0.44
UBR1-210ENST00000569337 PARP3Q9Y6F1 533 aa12.33□□□□□ -0.44
UBR1-210ENST00000569337 UBR3Q6ZT12 1888 aa12.33□□□□□ -0.44
UBR1-210ENST00000569337 SOS1Q07889 1333 aaPredicted RBP12.33□□□□□ -0.44
UBR1-210ENST00000569337 YY1P25490 414 aa12.32□□□□□ -0.44
UBR1-210ENST00000569337 TMPOP42166 694 aaKnown RBP12.32□□□□□ -0.44
UBR1-210ENST00000569337 USP42Q9H9J4 1324 aaKnown RBP12.32□□□□□ -0.44
UBR1-210ENST00000569337 FKBP8Q14318 412 aa12.31□□□□□ -0.44
UBR1-210ENST00000569337 USPL1Q5W0Q7 1092 aa12.31□□□□□ -0.44
UBR1-210ENST00000569337 NPM2Q86SE8 214 aaKnown RBP12.31□□□□□ -0.44
UBR1-210ENST00000569337 MIS18AQ9NYP9 233 aa12.31□□□□□ -0.44
UBR1-210ENST00000569337 COL24A1Q17RW2 1714 aa12.31□□□□□ -0.44
UBR1-210ENST00000569337 A0A087WZG4 1122 aa12.3□□□□□ -0.44
UBR1-210ENST00000569337 SNRPA1P09661 255 aaKnown RBP12.3□□□□□ -0.44
UBR1-210ENST00000569337 RIPK4P57078 832 aa12.3□□□□□ -0.44
UBR1-210ENST00000569337 NEUROD2Q15784 382 aa12.3□□□□□ -0.44
UBR1-210ENST00000569337 NARFQ9UHQ1 456 aa12.3□□□□□ -0.44
UBR1-210ENST00000569337 ZNF330Q9Y3S2 320 aaPredicted RBP12.3□□□□□ -0.44
UBR1-210ENST00000569337 USP16Q9Y5T5 823 aa12.3□□□□□ -0.44
UBR1-210ENST00000569337 COL15A1P39059 1388 aa12.3□□□□□ -0.44
UBR1-210ENST00000569337 COL5A3P25940 1745 aaPredicted RBP12.29□□□□□ -0.44
UBR1-210ENST00000569337 A1BGP04217 495 aa12.29□□□□□ -0.44
UBR1-210ENST00000569337 EIF5P55010 431 aaKnown RBP12.29□□□□□ -0.44
UBR1-210ENST00000569337 THUMPD2Q9BTF0 503 aaKnown RBP12.29□□□□□ -0.44
UBR1-210ENST00000569337 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
UBR1-210ENST00000569337 SALL2Q9Y467 1007 aaPredicted RBP12.29□□□□□ -0.44
UBR1-210ENST00000569337 TJP1Q07157 1748 aa12.28□□□□□ -0.44
UBR1-210ENST00000569337 GRIN3BO60391 1043 aa12.28□□□□□ -0.44
UBR1-210ENST00000569337 IL6STP40189 918 aaPredicted RBP12.28□□□□□ -0.44
UBR1-210ENST00000569337 TGFB2P61812 414 aa12.28□□□□□ -0.44
UBR1-210ENST00000569337 LMOD3Q0VAK6 560 aa12.28□□□□□ -0.44
UBR1-210ENST00000569337 CICQ96RK0 1608 aaPredicted RBP12.28□□□□□ -0.44
UBR1-210ENST00000569337 PRAMEF22A3QJZ6 481 aa12.27□□□□□ -0.45
UBR1-210ENST00000569337 YBX3P16989 372 aaKnown RBP eCLIP12.27□□□□□ -0.45
UBR1-210ENST00000569337 TM4SF1P30408 202 aa12.27□□□□□ -0.45
UBR1-210ENST00000569337 HNRNPUQ00839 825 aaKnown RBP eCLIP12.27□□□□□ -0.45
UBR1-210ENST00000569337 YTHDC1Q96MU7 727 aaKnown RBP12.27□□□□□ -0.45
UBR1-210ENST00000569337 MYH14Q7Z406 1995 aaKnown RBP12.27□□□□□ -0.45
UBR1-210ENST00000569337 DDR1Q08345 913 aa12.26□□□□□ -0.45
UBR1-210ENST00000569337 BCL2L12Q9HB09 334 aa12.26□□□□□ -0.45
UBR1-210ENST00000569337 WWC3Q9ULE0 1092 aa12.26□□□□□ -0.45
UBR1-210ENST00000569337 TBC1D2BQ9UPU7 963 aa12.26□□□□□ -0.45
UBR1-210ENST00000569337 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
UBR1-210ENST00000569337 A0A0G2JLW4 131 aa12.25□□□□□ -0.45
UBR1-210ENST00000569337 POLRMTO00411 1230 aaKnown RBP12.25□□□□□ -0.45
UBR1-210ENST00000569337 PIP4K2AP48426 406 aaPredicted RBP12.25□□□□□ -0.45
UBR1-210ENST00000569337 EIF4A1P60842 406 aaKnown RBP12.25□□□□□ -0.45
UBR1-210ENST00000569337 NFIXQ14938 502 aa12.25□□□□□ -0.45
UBR1-210ENST00000569337 BICDL1Q6ZP65 573 aa12.25□□□□□ -0.45
UBR1-210ENST00000569337 WWC1Q8IX03 1113 aa12.25□□□□□ -0.45
UBR1-210ENST00000569337 TSPYL4Q9UJ04 414 aa12.25□□□□□ -0.45
UBR1-210ENST00000569337 ZNF521Q96K83 1311 aa12.25□□□□□ -0.45
UBR1-210ENST00000569337 UBR2Q8IWV8 1755 aa12.25□□□□□ -0.45
UBR1-210ENST00000569337 GIGYF1O75420 1035 aaPredicted RBP12.24□□□□□ -0.45
UBR1-210ENST00000569337 SERPINB2P05120 415 aa12.24□□□□□ -0.45
UBR1-210ENST00000569337 CCDC27Q2M243 656 aa12.24□□□□□ -0.45
UBR1-210ENST00000569337 NCBP3Q53F19 620 aaKnown RBP12.24□□□□□ -0.45
UBR1-210ENST00000569337 DZIP3Q86Y13 1208 aaKnown RBP12.24□□□□□ -0.45
UBR1-210ENST00000569337 C10orf71Q711Q0 1435 aa12.23□□□□□ -0.45
UBR1-210ENST00000569337 DPEP1P16444 411 aa12.23□□□□□ -0.45
UBR1-210ENST00000569337 BABAM1Q9NWV8 329 aa12.23□□□□□ -0.45
UBR1-210ENST00000569337 NBPF26B4DH59 902 aa12.22□□□□□ -0.45
UBR1-210ENST00000569337 CAMTA2O94983 1202 aa12.22□□□□□ -0.45
UBR1-210ENST00000569337 TBC1D9BQ66K14 1250 aa12.22□□□□□ -0.45
UBR1-210ENST00000569337 NBPF10Q6P3W6 841 aaKnown RBP12.22□□□□□ -0.45
UBR1-210ENST00000569337 NBPF15Q8N660 670 aa12.22□□□□□ -0.45
UBR1-210ENST00000569337 SPINK5Q9NQ38 1064 aaPredicted RBP12.22□□□□□ -0.45
UBR1-210ENST00000569337 BCS1LQ9Y276 419 aa12.22□□□□□ -0.45
UBR1-210ENST00000569337 LAS1LQ9Y4W2 734 aaKnown RBP12.22□□□□□ -0.45
UBR1-210ENST00000569337 UTRNP46939 3433 aa12.22□□□□□ -0.45
UBR1-210ENST00000569337 ZBED9Q6R2W3 1325 aa12.21□□□□□ -0.45
UBR1-210ENST00000569337 C4AP0C0L4 1744 aa12.21□□□□□ -0.45
UBR1-210ENST00000569337 NGEFQ8N5V2 710 aa12.21□□□□□ -0.45
UBR1-210ENST00000569337 SETDB2Q96T68 719 aa12.21□□□□□ -0.45
UBR1-210ENST00000569337 PIM2Q9P1W9 311 aa12.21□□□□□ -0.45
UBR1-210ENST00000569337 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.46
UBR1-210ENST00000569337 NPHP1O15259 732 aa12.2□□□□□ -0.46
UBR1-210ENST00000569337 CLEC4GQ6UXB4 293 aa12.2□□□□□ -0.46
UBR1-210ENST00000569337 CDCA7LQ96GN5 454 aa12.2□□□□□ -0.46
UBR1-210ENST00000569337 ZNF652Q9Y2D9 606 aa12.2□□□□□ -0.46
UBR1-210ENST00000569337 GOLGB1Q14789 3259 aaKnown RBP12.19□□□□□ -0.46
UBR1-210ENST00000569337 CHL1O00533 1208 aa12.19□□□□□ -0.46
UBR1-210ENST00000569337 MYL6BP14649 208 aa12.19□□□□□ -0.46
UBR1-210ENST00000569337 EIF2S2P20042 333 aaKnown RBP12.19□□□□□ -0.46
UBR1-210ENST00000569337 KCNA3P22001 575 aa12.19□□□□□ -0.46
UBR1-210ENST00000569337 CHRNA5P30532 468 aa12.19□□□□□ -0.46
UBR1-210ENST00000569337 ZNF784Q8NCA9 323 aaPredicted RBP12.19□□□□□ -0.46
UBR1-210ENST00000569337 KDM3BQ7LBC6 1761 aa12.19□□□□□ -0.46
UBR1-210ENST00000569337 CARMIL3Q8ND23 1372 aa12.18□□□□□ -0.46
UBR1-210ENST00000569337 ZNF853P0CG23 659 aa12.18□□□□□ -0.46
UBR1-210ENST00000569337 DALRD3Q5D0E6 543 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms