RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 COL24A1Q17RW2 1714 aa19.08■□□□□ 0.64
COMMD4-225ENST00000569245 SOS1Q07889 1333 aaPredicted RBP19.07■□□□□ 0.64
COMMD4-225ENST00000569245 PARP3Q9Y6F1 533 aa19.07■□□□□ 0.64
COMMD4-225ENST00000569245 USP42Q9H9J4 1324 aaKnown RBP19.06■□□□□ 0.64
COMMD4-225ENST00000569245 TJP1Q07157 1748 aa19.06■□□□□ 0.64
COMMD4-225ENST00000569245 YY1P25490 414 aa19.06■□□□□ 0.64
COMMD4-225ENST00000569245 MIS18AQ9NYP9 233 aa19.06■□□□□ 0.64
COMMD4-225ENST00000569245 ZNF330Q9Y3S2 320 aaPredicted RBP19.06■□□□□ 0.64
COMMD4-225ENST00000569245 RIPK4P57078 832 aa19.05■□□□□ 0.64
COMMD4-225ENST00000569245 FKBP8Q14318 412 aa19.05■□□□□ 0.64
COMMD4-225ENST00000569245 USPL1Q5W0Q7 1092 aa19.05■□□□□ 0.64
COMMD4-225ENST00000569245 NPM2Q86SE8 214 aaKnown RBP19.05■□□□□ 0.64
COMMD4-225ENST00000569245 CCDC146Q8IYE0 955 aa19.05■□□□□ 0.64
COMMD4-225ENST00000569245 VIRMAQ69YN4 1812 aaKnown RBP19.04■□□□□ 0.64
COMMD4-225ENST00000569245 GOLGB1Q14789 3259 aaKnown RBP19.04■□□□□ 0.64
COMMD4-225ENST00000569245 PNISRQ8TF01 805 aaKnown RBP19.04■□□□□ 0.64
COMMD4-225ENST00000569245 THUMPD2Q9BTF0 503 aaKnown RBP19.04■□□□□ 0.64
COMMD4-225ENST00000569245 MYH14Q7Z406 1995 aaKnown RBP19.04■□□□□ 0.64
COMMD4-225ENST00000569245 UTRNP46939 3433 aa19.04■□□□□ 0.64
COMMD4-225ENST00000569245 SNRPA1P09661 255 aaKnown RBP19.03■□□□□ 0.64
COMMD4-225ENST00000569245 CCDC184Q52MB2 194 aa19.03■□□□□ 0.64
COMMD4-225ENST00000569245 NARFQ9UHQ1 456 aa19.03■□□□□ 0.64
COMMD4-225ENST00000569245 COL15A1P39059 1388 aa19.03■□□□□ 0.64
COMMD4-225ENST00000569245 A0A087WZG4 1122 aa19.02■□□□□ 0.64
COMMD4-225ENST00000569245 A1BGP04217 495 aa19.02■□□□□ 0.64
COMMD4-225ENST00000569245 NEUROD2Q15784 382 aa19.02■□□□□ 0.64
COMMD4-225ENST00000569245 MRS2Q9HD23 443 aa19.02■□□□□ 0.64
COMMD4-225ENST00000569245 ADAMTS8Q9UP79 889 aa19.02■□□□□ 0.64
COMMD4-225ENST00000569245 CICQ96RK0 1608 aaPredicted RBP19.02■□□□□ 0.64
COMMD4-225ENST00000569245 TMPOP42166 694 aaKnown RBP19.01■□□□□ 0.63
COMMD4-225ENST00000569245 EIF5P55010 431 aaKnown RBP19.01■□□□□ 0.63
COMMD4-225ENST00000569245 LMOD3Q0VAK6 560 aa19.01■□□□□ 0.63
COMMD4-225ENST00000569245 RRP7AQ9Y3A4 280 aaKnown RBP19.01■□□□□ 0.63
COMMD4-225ENST00000569245 USP16Q9Y5T5 823 aa19.01■□□□□ 0.63
COMMD4-225ENST00000569245 PRAMEF22A3QJZ6 481 aa19■□□□□ 0.63
COMMD4-225ENST00000569245 RUNDC1Q96C34 613 aa19■□□□□ 0.63
COMMD4-225ENST00000569245 WWC3Q9ULE0 1092 aa19■□□□□ 0.63
COMMD4-225ENST00000569245 UBR2Q8IWV8 1755 aa19■□□□□ 0.63
COMMD4-225ENST00000569245 SIPA1L3O60292 1781 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-225ENST00000569245 GRIN3BO60391 1043 aa18.99■□□□□ 0.63
COMMD4-225ENST00000569245 IL6STP40189 918 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-225ENST00000569245 TBC1D2BQ9UPU7 963 aa18.99■□□□□ 0.63
COMMD4-225ENST00000569245 YBX3P16989 372 aaKnown RBP eCLIP18.98■□□□□ 0.63
COMMD4-225ENST00000569245 DDR1Q08345 913 aa18.98■□□□□ 0.63
COMMD4-225ENST00000569245 TM4SF1P30408 202 aa18.97■□□□□ 0.63
COMMD4-225ENST00000569245 PIP4K2AP48426 406 aaPredicted RBP18.97■□□□□ 0.63
COMMD4-225ENST00000569245 TSPYL4Q9UJ04 414 aa18.97■□□□□ 0.63
COMMD4-225ENST00000569245 A0A0G2JLW4 131 aa18.96■□□□□ 0.63
COMMD4-225ENST00000569245 TGFB2P61812 414 aa18.96■□□□□ 0.63
COMMD4-225ENST00000569245 NFIXQ14938 502 aa18.96■□□□□ 0.63
COMMD4-225ENST00000569245 BICDL1Q6ZP65 573 aa18.96■□□□□ 0.63
COMMD4-225ENST00000569245 C4AP0C0L4 1744 aa18.96■□□□□ 0.63
COMMD4-225ENST00000569245 POLRMTO00411 1230 aaKnown RBP18.95■□□□□ 0.62
COMMD4-225ENST00000569245 BCL2L12Q9HB09 334 aa18.95■□□□□ 0.62
COMMD4-225ENST00000569245 EIF4A1P60842 406 aaKnown RBP18.94■□□□□ 0.62
COMMD4-225ENST00000569245 C10orf71Q711Q0 1435 aa18.93■□□□□ 0.62
COMMD4-225ENST00000569245 GIGYF1O75420 1035 aaPredicted RBP18.93■□□□□ 0.62
COMMD4-225ENST00000569245 DPEP1P16444 411 aa18.93■□□□□ 0.62
COMMD4-225ENST00000569245 DZIP3Q86Y13 1208 aaKnown RBP18.93■□□□□ 0.62
COMMD4-225ENST00000569245 LAS1LQ9Y4W2 734 aaKnown RBP18.93■□□□□ 0.62
COMMD4-225ENST00000569245 SERPINB2P05120 415 aa18.92■□□□□ 0.62
COMMD4-225ENST00000569245 TBC1D9BQ66K14 1250 aa18.91■□□□□ 0.62
COMMD4-225ENST00000569245 BCS1LQ9Y276 419 aa18.91■□□□□ 0.62
COMMD4-225ENST00000569245 PXDNLA1KZ92 1463 aa18.9■□□□□ 0.62
COMMD4-225ENST00000569245 DLG5Q8TDM6 1919 aa18.9■□□□□ 0.62
COMMD4-225ENST00000569245 NBPF26B4DH59 902 aa18.9■□□□□ 0.62
COMMD4-225ENST00000569245 CAMTA2O94983 1202 aa18.9■□□□□ 0.62
COMMD4-225ENST00000569245 NBPF10Q6P3W6 841 aaKnown RBP18.9■□□□□ 0.62
COMMD4-225ENST00000569245 NGEFQ8N5V2 710 aa18.9■□□□□ 0.62
COMMD4-225ENST00000569245 NBPF15Q8N660 670 aa18.9■□□□□ 0.62
COMMD4-225ENST00000569245 BABAM1Q9NWV8 329 aa18.9■□□□□ 0.62
COMMD4-225ENST00000569245 TRIM35Q9UPQ4 493 aa18.9■□□□□ 0.62
COMMD4-225ENST00000569245 APAF1O14727 1248 aa18.89■□□□□ 0.61
COMMD4-225ENST00000569245 NPHP1O15259 732 aa18.89■□□□□ 0.61
COMMD4-225ENST00000569245 SETDB2Q96T68 719 aa18.89■□□□□ 0.61
COMMD4-225ENST00000569245 PIM2Q9P1W9 311 aa18.88■□□□□ 0.61
COMMD4-225ENST00000569245 ZNF652Q9Y2D9 606 aa18.88■□□□□ 0.61
COMMD4-225ENST00000569245 MYL6BP14649 208 aa18.87■□□□□ 0.61
COMMD4-225ENST00000569245 EIF2S2P20042 333 aaKnown RBP18.87■□□□□ 0.61
COMMD4-225ENST00000569245 CHRNA5P30532 468 aa18.87■□□□□ 0.61
COMMD4-225ENST00000569245 DALRD3Q5D0E6 543 aaKnown RBP18.86■□□□□ 0.61
COMMD4-225ENST00000569245 FAM9BQ8IZU0 186 aa18.86■□□□□ 0.61
COMMD4-225ENST00000569245 CARMIL3Q8ND23 1372 aa18.85■□□□□ 0.61
COMMD4-225ENST00000569245 CHL1O00533 1208 aa18.85■□□□□ 0.61
COMMD4-225ENST00000569245 KCNA3P22001 575 aa18.85■□□□□ 0.61
COMMD4-225ENST00000569245 CLEC4GQ6UXB4 293 aa18.85■□□□□ 0.61
COMMD4-225ENST00000569245 ZNF784Q8NCA9 323 aaPredicted RBP18.85■□□□□ 0.61
COMMD4-225ENST00000569245 KIF6Q6ZMV9 814 aa18.84■□□□□ 0.61
COMMD4-225ENST00000569245 ARHGAP27Q6ZUM4 889 aa18.84■□□□□ 0.61
COMMD4-225ENST00000569245 CCDC24Q8N4L8 307 aa18.84■□□□□ 0.61
COMMD4-225ENST00000569245 KDM3BQ7LBC6 1761 aa18.83■□□□□ 0.61
COMMD4-225ENST00000569245 H0YIN7 160 aa18.83■□□□□ 0.6
COMMD4-225ENST00000569245 CALD1Q05682 793 aaKnown RBP18.83■□□□□ 0.6
COMMD4-225ENST00000569245 NBPF5PQ86XG9 351 aaPredicted RBP18.83■□□□□ 0.6
COMMD4-225ENST00000569245 C2CD5Q86YS7 1000 aa18.83■□□□□ 0.6
COMMD4-225ENST00000569245 CNBD1Q8NA66 436 aa18.83■□□□□ 0.6
COMMD4-225ENST00000569245 NECTIN2Q92692 538 aa18.83■□□□□ 0.6
COMMD4-225ENST00000569245 ST5P78524 1137 aa18.82■□□□□ 0.6
COMMD4-225ENST00000569245 CFAP44Q96MT7 982 aa18.82■□□□□ 0.6
COMMD4-225ENST00000569245 NIP7Q9Y221 180 aaKnown RBP eCLIP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms