RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 NBPF26B4DH59 902 aa8.69□□□□□ -1.02
CDH13-212ENST00000569144 C3orf80F5H4A9 247 aa8.69□□□□□ -1.02
CDH13-212ENST00000569144 NLRP13Q86W25 1043 aa8.69□□□□□ -1.02
CDH13-212ENST00000569144 MRPL50Q8N5N7 158 aaKnown RBP8.69□□□□□ -1.02
CDH13-212ENST00000569144 ZC3H15Q8WU90 426 aaKnown RBP8.69□□□□□ -1.02
CDH13-212ENST00000569144 CDCA7Q9BWT1 371 aaPredicted RBP8.69□□□□□ -1.02
CDH13-212ENST00000569144 SEPT9Q9UHD8 586 aaPredicted RBP8.69□□□□□ -1.02
CDH13-212ENST00000569144 PNMA3Q9UL41 463 aa8.69□□□□□ -1.02
CDH13-212ENST00000569144 PLEKHG3A1L390 1219 aa8.68□□□□□ -1.02
CDH13-212ENST00000569144 SMAPO00193 183 aa8.68□□□□□ -1.02
CDH13-212ENST00000569144 NUDT18Q6ZVK8 323 aa8.68□□□□□ -1.02
CDH13-212ENST00000569144 TATDN2Q93075 761 aa8.68□□□□□ -1.02
CDH13-212ENST00000569144 TOPAZ1Q8N9V7 1692 aa8.68□□□□□ -1.02
CDH13-212ENST00000569144 PAPPAQ13219 1627 aa8.67□□□□□ -1.02
CDH13-212ENST00000569144 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
CDH13-212ENST00000569144 TOM1L2Q6ZVM7 507 aa8.67□□□□□ -1.02
CDH13-212ENST00000569144 BRD4O60885 1362 aaPredicted RBP8.66□□□□□ -1.02
CDH13-212ENST00000569144 WDR17Q8IZU2 1322 aa8.66□□□□□ -1.02
CDH13-212ENST00000569144 GOLGA8CPA6NN73 597 aa8.66□□□□□ -1.02
CDH13-212ENST00000569144 HSPA6P17066 643 aa8.66□□□□□ -1.02
CDH13-212ENST00000569144 CDK19Q9BWU1 502 aa8.66□□□□□ -1.02
CDH13-212ENST00000569144 WNK3Q9BYP7 1800 aa8.66□□□□□ -1.02
CDH13-212ENST00000569144 ZBTB7CA1YPR0 619 aa8.65□□□□□ -1.02
CDH13-212ENST00000569144 GRIN3BO60391 1043 aa8.65□□□□□ -1.02
CDH13-212ENST00000569144 LAPTM4BQ86VI4 370 aa8.65□□□□□ -1.02
CDH13-212ENST00000569144 SLC16A10Q8TF71 515 aa8.65□□□□□ -1.02
CDH13-212ENST00000569144 ADGRG1Q9Y653 693 aa8.65□□□□□ -1.02
CDH13-212ENST00000569144 AKAP12Q02952 1782 aa8.65□□□□□ -1.02
CDH13-212ENST00000569144 SLIT3O75094 1523 aa8.64□□□□□ -1.03
CDH13-212ENST00000569144 ATP10DQ9P241 1426 aa8.64□□□□□ -1.03
CDH13-212ENST00000569144 ARHGEF28Q8N1W1 1705 aaKnown RBP8.64□□□□□ -1.03
CDH13-212ENST00000569144 EXOC5O00471 708 aa8.64□□□□□ -1.03
CDH13-212ENST00000569144 POLD1P28340 1107 aa8.64□□□□□ -1.03
CDH13-212ENST00000569144 MMRN1Q13201 1228 aa8.64□□□□□ -1.03
CDH13-212ENST00000569144 ZNF827Q17R98 1081 aa8.64□□□□□ -1.03
CDH13-212ENST00000569144 NHSQ6T4R5 1651 aa8.64□□□□□ -1.03
CDH13-212ENST00000569144 TNS2Q63HR2 1409 aa8.63□□□□□ -1.03
CDH13-212ENST00000569144 ZMYND10O75800 440 aa8.63□□□□□ -1.03
CDH13-212ENST00000569144 NLGN2Q8NFZ4 835 aa8.63□□□□□ -1.03
CDH13-212ENST00000569144 RBM46Q8TBY0 533 aaKnown RBP8.63□□□□□ -1.03
CDH13-212ENST00000569144 CARD10Q9BWT7 1032 aa8.63□□□□□ -1.03
CDH13-212ENST00000569144 CPSF1Q10570 1443 aaKnown RBP8.63□□□□□ -1.03
CDH13-212ENST00000569144 YBX3P16989 372 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDH13-212ENST00000569144 MAP2K5Q13163 448 aa8.62□□□□□ -1.03
CDH13-212ENST00000569144 KRI1Q8N9T8 703 aaKnown RBP8.62□□□□□ -1.03
CDH13-212ENST00000569144 RNF166Q96A37 237 aaPredicted RBP8.62□□□□□ -1.03
CDH13-212ENST00000569144 ZFRQ96KR1 1074 aaKnown RBP8.62□□□□□ -1.03
CDH13-212ENST00000569144 EYA1Q99502 592 aa8.62□□□□□ -1.03
CDH13-212ENST00000569144 GPBP1L1Q9HC44 474 aaPredicted RBP8.62□□□□□ -1.03
CDH13-212ENST00000569144 COL18A1P39060 1754 aa8.62□□□□□ -1.03
CDH13-212ENST00000569144 COL24A1Q17RW2 1714 aa8.62□□□□□ -1.03
CDH13-212ENST00000569144 PPIP5K1Q6PFW1 1433 aa8.62□□□□□ -1.03
CDH13-212ENST00000569144 GOLGB1Q14789 3259 aaKnown RBP8.62□□□□□ -1.03
CDH13-212ENST00000569144 CCDC7Q96M83 1385 aa8.61□□□□□ -1.03
CDH13-212ENST00000569144 OATP04181 439 aa8.61□□□□□ -1.03
CDH13-212ENST00000569144 WNT2BQ93097 391 aa8.61□□□□□ -1.03
CDH13-212ENST00000569144 KCTD12Q96CX2 325 aaKnown RBP8.61□□□□□ -1.03
CDH13-212ENST00000569144 ACSBG1Q96GR2 724 aa8.61□□□□□ -1.03
CDH13-212ENST00000569144 PLSCR2Q9NRY7 297 aa8.61□□□□□ -1.03
CDH13-212ENST00000569144 LRRC4BQ9NT99 713 aa8.61□□□□□ -1.03
CDH13-212ENST00000569144 USP6P35125 1406 aa8.61□□□□□ -1.03
CDH13-212ENST00000569144 TRPM1Q7Z4N2 1603 aa8.61□□□□□ -1.03
CDH13-212ENST00000569144 ADCY9O60503 1353 aa8.61□□□□□ -1.03
CDH13-212ENST00000569144 QSER1Q2KHR3 1735 aa8.6□□□□□ -1.03
CDH13-212ENST00000569144 ABCC6O95255 1503 aa8.6□□□□□ -1.03
CDH13-212ENST00000569144 PNPLA7Q6ZV29 1317 aa8.6□□□□□ -1.03
CDH13-212ENST00000569144 CSB-PGBD3P0DP91 1061 aa8.6□□□□□ -1.03
CDH13-212ENST00000569144 ARHGEF25Q86VW2 580 aa8.6□□□□□ -1.03
CDH13-212ENST00000569144 PXYLP1Q8TE99 480 aa8.6□□□□□ -1.03
CDH13-212ENST00000569144 DCAF11Q8TEB1 546 aa8.6□□□□□ -1.03
CDH13-212ENST00000569144 IRF6O14896 467 aa8.59□□□□□ -1.03
CDH13-212ENST00000569144 SLC27A3Q5K4L6 730 aa8.59□□□□□ -1.03
CDH13-212ENST00000569144 METTL3Q86U44 580 aaKnown RBP8.59□□□□□ -1.03
CDH13-212ENST00000569144 ANKK1Q8NFD2 765 aa8.59□□□□□ -1.03
CDH13-212ENST00000569144 CCDC102AQ96A19 550 aa8.59□□□□□ -1.03
CDH13-212ENST00000569144 RCCD1A6NED2 376 aa8.58□□□□□ -1.04
CDH13-212ENST00000569144 SRPK2P78362 688 aaKnown RBP8.58□□□□□ -1.04
CDH13-212ENST00000569144 KCNH5Q8NCM2 988 aa8.58□□□□□ -1.04
CDH13-212ENST00000569144 BTAF1O14981 1849 aa8.57□□□□□ -1.04
CDH13-212ENST00000569144 PIK3C2AO00443 1686 aa8.57□□□□□ -1.04
CDH13-212ENST00000569144 DNAJB2P25686 324 aa8.57□□□□□ -1.04
CDH13-212ENST00000569144 APLP1P51693 650 aa8.57□□□□□ -1.04
CDH13-212ENST00000569144 SAMD7Q7Z3H4 446 aa8.57□□□□□ -1.04
CDH13-212ENST00000569144 TFCP2L1Q9NZI6 479 aa8.57□□□□□ -1.04
CDH13-212ENST00000569144 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.56□□□□□ -1.04
CDH13-212ENST00000569144 BCAMP50895 628 aa8.56□□□□□ -1.04
CDH13-212ENST00000569144 THSD4Q6ZMP0 1018 aa8.56□□□□□ -1.04
CDH13-212ENST00000569144 ZNF526Q8TF50 670 aaPredicted RBP8.56□□□□□ -1.04
CDH13-212ENST00000569144 LRCH3Q96II8 777 aa8.56□□□□□ -1.04
CDH13-212ENST00000569144 PHOX2BQ99453 314 aa8.56□□□□□ -1.04
CDH13-212ENST00000569144 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.56□□□□□ -1.04
CDH13-212ENST00000569144 SOWAHBA6NEL2 793 aa8.55□□□□□ -1.04
CDH13-212ENST00000569144 IL2RBP14784 551 aa8.55□□□□□ -1.04
CDH13-212ENST00000569144 SWT1Q5T5J6 900 aaKnown RBP8.55□□□□□ -1.04
CDH13-212ENST00000569144 DNAJC5GQ8N7S2 189 aa8.55□□□□□ -1.04
CDH13-212ENST00000569144 NLRP7Q8WX94 980 aa8.55□□□□□ -1.04
CDH13-212ENST00000569144 CABP1Q9NZU7 370 aa8.55□□□□□ -1.04
CDH13-212ENST00000569144 QRICH2Q9H0J4 1663 aa8.55□□□□□ -1.04
CDH13-212ENST00000569144 NFAT5O94916 1531 aa8.54□□□□□ -1.04
CDH13-212ENST00000569144 RNF40O75150 1001 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms