RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 RFC4P35249 363 aa10.45□□□□□ -0.74
CDH3-209ENST00000569080 DDR1Q08345 913 aa10.45□□□□□ -0.74
CDH3-209ENST00000569080 FKBP8Q14318 412 aa10.45□□□□□ -0.74
CDH3-209ENST00000569080 DLEC1Q9Y238 1755 aa10.44□□□□□ -0.74
CDH3-209ENST00000569080 ADCY9O60503 1353 aa10.44□□□□□ -0.74
CDH3-209ENST00000569080 MCM10Q7L590 875 aa10.44□□□□□ -0.74
CDH3-209ENST00000569080 TTC5Q8N0Z6 440 aa10.44□□□□□ -0.74
CDH3-209ENST00000569080 ZNF784Q8NCA9 323 aaPredicted RBP10.44□□□□□ -0.74
CDH3-209ENST00000569080 BCL2L12Q9HB09 334 aa10.44□□□□□ -0.74
CDH3-209ENST00000569080 ARFGEF1Q9Y6D6 1849 aa10.44□□□□□ -0.74
CDH3-209ENST00000569080 POLRMTO00411 1230 aaKnown RBP10.43□□□□□ -0.74
CDH3-209ENST00000569080 HTATSF1O43719 755 aaKnown RBP10.43□□□□□ -0.74
CDH3-209ENST00000569080 EIF5P55010 431 aaKnown RBP10.43□□□□□ -0.74
CDH3-209ENST00000569080 DDX10Q13206 875 aaKnown RBP10.43□□□□□ -0.74
CDH3-209ENST00000569080 DCTN1Q14203 1278 aa10.43□□□□□ -0.74
CDH3-209ENST00000569080 RALBP1Q15311 655 aa10.43□□□□□ -0.74
CDH3-209ENST00000569080 PELP1Q8IZL8 1130 aaKnown RBP10.43□□□□□ -0.74
CDH3-209ENST00000569080 MYBBP1AQ9BQG0 1328 aaKnown RBP10.42□□□□□ -0.74
CDH3-209ENST00000569080 BTBD11A6QL63 1104 aa10.42□□□□□ -0.74
CDH3-209ENST00000569080 TM4SF1P30408 202 aa10.42□□□□□ -0.74
CDH3-209ENST00000569080 USPL1Q5W0Q7 1092 aa10.42□□□□□ -0.74
CDH3-209ENST00000569080 FMNL2Q96PY5 1086 aa10.42□□□□□ -0.74
CDH3-209ENST00000569080 NARFQ9UHQ1 456 aa10.42□□□□□ -0.74
CDH3-209ENST00000569080 ANKRD31Q8N7Z5 1873 aa10.42□□□□□ -0.74
CDH3-209ENST00000569080 COL11A2P13942 1736 aaPredicted RBP10.41□□□□□ -0.74
CDH3-209ENST00000569080 PRAMEF22A3QJZ6 481 aa10.41□□□□□ -0.74
CDH3-209ENST00000569080 GRIN3BO60391 1043 aa10.41□□□□□ -0.74
CDH3-209ENST00000569080 PARP3Q9Y6F1 533 aa10.41□□□□□ -0.74
CDH3-209ENST00000569080 CARMIL3Q8ND23 1372 aa10.4□□□□□ -0.74
CDH3-209ENST00000569080 STARD3NLO95772 234 aa10.4□□□□□ -0.74
CDH3-209ENST00000569080 KCNA3P22001 575 aa10.4□□□□□ -0.74
CDH3-209ENST00000569080 CANXP27824 592 aaKnown RBP10.4□□□□□ -0.74
CDH3-209ENST00000569080 TGFB2P61812 414 aa10.4□□□□□ -0.74
CDH3-209ENST00000569080 NFIXQ14938 502 aa10.4□□□□□ -0.74
CDH3-209ENST00000569080 NFE2L2Q16236 605 aa10.4□□□□□ -0.74
CDH3-209ENST00000569080 RTF1Q92541 710 aaKnown RBP10.4□□□□□ -0.74
CDH3-209ENST00000569080 WWC3Q9ULE0 1092 aa10.4□□□□□ -0.74
CDH3-209ENST00000569080 ZPR1O75312 459 aa10.39□□□□□ -0.75
CDH3-209ENST00000569080 A1BGP04217 495 aa10.39□□□□□ -0.75
CDH3-209ENST00000569080 DPEP1P16444 411 aa10.39□□□□□ -0.75
CDH3-209ENST00000569080 IL6STP40189 918 aaPredicted RBP10.39□□□□□ -0.75
CDH3-209ENST00000569080 THUMPD2Q9BTF0 503 aaKnown RBP10.39□□□□□ -0.75
CDH3-209ENST00000569080 TEX13AQ9BXU3 409 aaPredicted RBP10.39□□□□□ -0.75
CDH3-209ENST00000569080 USP16Q9Y5T5 823 aa10.39□□□□□ -0.75
CDH3-209ENST00000569080 A0A0G2JLW4 131 aa10.38□□□□□ -0.75
CDH3-209ENST00000569080 PRKRIP1Q9H875 184 aaPredicted RBP10.38□□□□□ -0.75
CDH3-209ENST00000569080 ATP10DQ9P241 1426 aa10.38□□□□□ -0.75
CDH3-209ENST00000569080 NBPF26B4DH59 902 aa10.37□□□□□ -0.75
CDH3-209ENST00000569080 CAMTA2O94983 1202 aa10.37□□□□□ -0.75
CDH3-209ENST00000569080 SNRPA1P09661 255 aaKnown RBP10.37□□□□□ -0.75
CDH3-209ENST00000569080 PIP4K2AP48426 406 aaPredicted RBP10.37□□□□□ -0.75
CDH3-209ENST00000569080 TAF7Q15545 349 aaPredicted RBP10.37□□□□□ -0.75
CDH3-209ENST00000569080 NBPF10Q6P3W6 841 aaKnown RBP10.37□□□□□ -0.75
CDH3-209ENST00000569080 NBPF15Q8N660 670 aa10.37□□□□□ -0.75
CDH3-209ENST00000569080 MIS18AQ9NYP9 233 aa10.37□□□□□ -0.75
CDH3-209ENST00000569080 MAPK8IP3Q9UPT6 1336 aa10.36□□□□□ -0.75
CDH3-209ENST00000569080 A0A087WZG4 1122 aa10.36□□□□□ -0.75
CDH3-209ENST00000569080 TBC1D9BQ66K14 1250 aa10.36□□□□□ -0.75
CDH3-209ENST00000569080 TBC1D2BQ9UPU7 963 aa10.36□□□□□ -0.75
CDH3-209ENST00000569080 ARFGEF2Q9Y6D5 1785 aa10.36□□□□□ -0.75
CDH3-209ENST00000569080 GIGYF1O75420 1035 aaPredicted RBP10.35□□□□□ -0.75
CDH3-209ENST00000569080 SERPINB2P05120 415 aa10.35□□□□□ -0.75
CDH3-209ENST00000569080 NEFMP07197 916 aa10.35□□□□□ -0.75
CDH3-209ENST00000569080 CHRNA5P30532 468 aa10.35□□□□□ -0.75
CDH3-209ENST00000569080 TMPOP42166 694 aaKnown RBP10.35□□□□□ -0.75
CDH3-209ENST00000569080 EIF4A1P60842 406 aaKnown RBP10.35□□□□□ -0.75
CDH3-209ENST00000569080 BCS1LQ9Y276 419 aa10.35□□□□□ -0.75
CDH3-209ENST00000569080 CEP350Q5VT06 3117 aa10.35□□□□□ -0.75
CDH3-209ENST00000569080 DZIP3Q86Y13 1208 aaKnown RBP10.34□□□□□ -0.75
CDH3-209ENST00000569080 PNISRQ8TF01 805 aaKnown RBP10.34□□□□□ -0.75
CDH3-209ENST00000569080 PNNQ9H307 717 aaKnown RBP10.34□□□□□ -0.75
CDH3-209ENST00000569080 ZNF330Q9Y3S2 320 aaPredicted RBP10.34□□□□□ -0.75
CDH3-209ENST00000569080 TNRC6CQ9HCJ0 1690 aaKnown RBP10.34□□□□□ -0.75
CDH3-209ENST00000569080 SBF1O95248 1867 aa10.34□□□□□ -0.75
CDH3-209ENST00000569080 NUP98P52948 1817 aa10.33□□□□□ -0.76
CDH3-209ENST00000569080 RGL2O15211 777 aa10.33□□□□□ -0.76
CDH3-209ENST00000569080 PRR5LQ6MZQ0 368 aa10.33□□□□□ -0.76
CDH3-209ENST00000569080 BICDL1Q6ZP65 573 aa10.33□□□□□ -0.76
CDH3-209ENST00000569080 CCDC146Q8IYE0 955 aa10.33□□□□□ -0.76
CDH3-209ENST00000569080 PIM2Q9P1W9 311 aa10.33□□□□□ -0.76
CDH3-209ENST00000569080 RIPK4P57078 832 aa10.32□□□□□ -0.76
CDH3-209ENST00000569080 LRP10Q7Z4F1 713 aa10.32□□□□□ -0.76
CDH3-209ENST00000569080 ADAMTS8Q9UP79 889 aa10.32□□□□□ -0.76
CDH3-209ENST00000569080 TRIM35Q9UPQ4 493 aa10.32□□□□□ -0.76
CDH3-209ENST00000569080 RRP7AQ9Y3A4 280 aaKnown RBP10.32□□□□□ -0.76
CDH3-209ENST00000569080 TIAM2Q8IVF5 1701 aa10.32□□□□□ -0.76
CDH3-209ENST00000569080 CACNA1SQ13698 1873 aa10.32□□□□□ -0.76
CDH3-209ENST00000569080 ZEB1P37275 1124 aaPredicted RBP10.31□□□□□ -0.76
CDH3-209ENST00000569080 LMOD3Q0VAK6 560 aa10.31□□□□□ -0.76
CDH3-209ENST00000569080 DALRD3Q5D0E6 543 aaKnown RBP10.31□□□□□ -0.76
CDH3-209ENST00000569080 CLEC4GQ6UXB4 293 aa10.31□□□□□ -0.76
CDH3-209ENST00000569080 RUNDC1Q96C34 613 aa10.31□□□□□ -0.76
CDH3-209ENST00000569080 BABAM1Q9NWV8 329 aa10.31□□□□□ -0.76
CDH3-209ENST00000569080 TSPYL4Q9UJ04 414 aa10.31□□□□□ -0.76
CDH3-209ENST00000569080 FER1L6Q2WGJ9 1857 aa10.31□□□□□ -0.76
CDH3-209ENST00000569080 ERBB4Q15303 1308 aa10.31□□□□□ -0.76
CDH3-209ENST00000569080 ANKRD36CQ5JPF3 1778 aa10.3□□□□□ -0.76
CDH3-209ENST00000569080 WDR43Q15061 677 aaKnown RBP eCLIP10.3□□□□□ -0.76
CDH3-209ENST00000569080 CCDC24Q8N4L8 307 aa10.3□□□□□ -0.76
CDH3-209ENST00000569080 CNBD1Q8NA66 436 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms