RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 USP42Q9H9J4 1324 aaKnown RBP23.22■■□□□ 1.31
EDC3-215ENST00000569007 PELP1Q8IZL8 1130 aaKnown RBP23.21■■□□□ 1.31
EDC3-215ENST00000569007 CANXP27824 592 aaKnown RBP23.2■■□□□ 1.3
EDC3-215ENST00000569007 TEX13AQ9BXU3 409 aaPredicted RBP23.2■■□□□ 1.3
EDC3-215ENST00000569007 COL15A1P39059 1388 aa23.19■■□□□ 1.3
EDC3-215ENST00000569007 FKBP8Q14318 412 aa23.19■■□□□ 1.3
EDC3-215ENST00000569007 TAF7Q15545 349 aaPredicted RBP23.19■■□□□ 1.3
EDC3-215ENST00000569007 DLG5Q8TDM6 1919 aa23.19■■□□□ 1.3
EDC3-215ENST00000569007 ZPR1O75312 459 aa23.18■■□□□ 1.3
EDC3-215ENST00000569007 YY1P25490 414 aa23.18■■□□□ 1.3
EDC3-215ENST00000569007 THUMPD2Q9BTF0 503 aaKnown RBP23.17■■□□□ 1.3
EDC3-215ENST00000569007 ZNF316A6NFI3 1004 aaPredicted RBP23.16■■□□□ 1.3
EDC3-215ENST00000569007 WDR43Q15061 677 aaKnown RBP eCLIP23.16■■□□□ 1.3
EDC3-215ENST00000569007 USPL1Q5W0Q7 1092 aa23.16■■□□□ 1.3
EDC3-215ENST00000569007 MIS18AQ9NYP9 233 aa23.16■■□□□ 1.3
EDC3-215ENST00000569007 NARFQ9UHQ1 456 aa23.16■■□□□ 1.3
EDC3-215ENST00000569007 PARP3Q9Y6F1 533 aa23.16■■□□□ 1.3
EDC3-215ENST00000569007 EIF5P55010 431 aaKnown RBP23.15■■□□□ 1.3
EDC3-215ENST00000569007 A1BGP04217 495 aa23.14■■□□□ 1.29
EDC3-215ENST00000569007 YBX3P16989 372 aaKnown RBP eCLIP23.14■■□□□ 1.29
EDC3-215ENST00000569007 CCDC146Q8IYE0 955 aa23.14■■□□□ 1.29
EDC3-215ENST00000569007 PRAMEF22A3QJZ6 481 aa23.13■■□□□ 1.29
EDC3-215ENST00000569007 SNRPA1P09661 255 aaKnown RBP23.13■■□□□ 1.29
EDC3-215ENST00000569007 RIPK4P57078 832 aa23.13■■□□□ 1.29
EDC3-215ENST00000569007 DDR1Q08345 913 aa23.13■■□□□ 1.29
EDC3-215ENST00000569007 USP16Q9Y5T5 823 aa23.13■■□□□ 1.29
EDC3-215ENST00000569007 TMPOP42166 694 aaKnown RBP23.12■■□□□ 1.29
EDC3-215ENST00000569007 C10orf71Q711Q0 1435 aa23.12■■□□□ 1.29
EDC3-215ENST00000569007 ZNF330Q9Y3S2 320 aaPredicted RBP23.12■■□□□ 1.29
EDC3-215ENST00000569007 A0A087WZG4 1122 aa23.11■■□□□ 1.29
EDC3-215ENST00000569007 TM4SF1P30408 202 aa23.11■■□□□ 1.29
EDC3-215ENST00000569007 IL6STP40189 918 aaPredicted RBP23.11■■□□□ 1.29
EDC3-215ENST00000569007 PNISRQ8TF01 805 aaKnown RBP23.11■■□□□ 1.29
EDC3-215ENST00000569007 BCL2L12Q9HB09 334 aa23.11■■□□□ 1.29
EDC3-215ENST00000569007 ADAMTS8Q9UP79 889 aa23.11■■□□□ 1.29
EDC3-215ENST00000569007 WWC3Q9ULE0 1092 aa23.1■■□□□ 1.29
EDC3-215ENST00000569007 RRP7AQ9Y3A4 280 aaKnown RBP23.1■■□□□ 1.29
EDC3-215ENST00000569007 RUNDC1Q96C34 613 aa23.09■■□□□ 1.29
EDC3-215ENST00000569007 KIF13BQ9NQT8 1826 aa23.09■■□□□ 1.29
EDC3-215ENST00000569007 POLRMTO00411 1230 aaKnown RBP23.08■■□□□ 1.29
EDC3-215ENST00000569007 GRIN3BO60391 1043 aa23.08■■□□□ 1.29
EDC3-215ENST00000569007 PIP4K2AP48426 406 aaPredicted RBP23.08■■□□□ 1.29
EDC3-215ENST00000569007 NFIXQ14938 502 aa23.08■■□□□ 1.29
EDC3-215ENST00000569007 TBC1D2BQ9UPU7 963 aa23.08■■□□□ 1.29
EDC3-215ENST00000569007 PXDNLA1KZ92 1463 aa23.08■■□□□ 1.29
EDC3-215ENST00000569007 KDM3BQ7LBC6 1761 aa23.07■■□□□ 1.28
EDC3-215ENST00000569007 TGFB2P61812 414 aa23.07■■□□□ 1.28
EDC3-215ENST00000569007 LMOD3Q0VAK6 560 aa23.07■■□□□ 1.28
EDC3-215ENST00000569007 NEUROD2Q15784 382 aa23.07■■□□□ 1.28
EDC3-215ENST00000569007 NPM2Q86SE8 214 aaKnown RBP23.07■■□□□ 1.28
EDC3-215ENST00000569007 A0A0G2JLW4 131 aa23.06■■□□□ 1.28
EDC3-215ENST00000569007 EIF4A1P60842 406 aaKnown RBP23.05■■□□□ 1.28
EDC3-215ENST00000569007 CHD4Q14839 1912 aa23.05■■□□□ 1.28
EDC3-215ENST00000569007 KIAA1551Q9HCM1 1747 aa23.05■■□□□ 1.28
EDC3-215ENST00000569007 TSPYL4Q9UJ04 414 aa23.04■■□□□ 1.28
EDC3-215ENST00000569007 NBPF26B4DH59 902 aa23.03■■□□□ 1.28
EDC3-215ENST00000569007 GIGYF1O75420 1035 aaPredicted RBP23.03■■□□□ 1.28
EDC3-215ENST00000569007 DPEP1P16444 411 aa23.03■■□□□ 1.28
EDC3-215ENST00000569007 NBPF10Q6P3W6 841 aaKnown RBP23.03■■□□□ 1.28
EDC3-215ENST00000569007 NBPF15Q8N660 670 aa23.03■■□□□ 1.28
EDC3-215ENST00000569007 N4BP2Q86UW6 1770 aaPredicted RBP23.03■■□□□ 1.28
EDC3-215ENST00000569007 SCN7AQ01118 1682 aa23.03■■□□□ 1.28
EDC3-215ENST00000569007 CAMTA2O94983 1202 aa23.02■■□□□ 1.28
EDC3-215ENST00000569007 BICDL1Q6ZP65 573 aa23.02■■□□□ 1.28
EDC3-215ENST00000569007 DZIP3Q86Y13 1208 aaKnown RBP23.02■■□□□ 1.28
EDC3-215ENST00000569007 SERPINB2P05120 415 aa23.01■■□□□ 1.27
EDC3-215ENST00000569007 TBC1D9BQ66K14 1250 aa23.01■■□□□ 1.27
EDC3-215ENST00000569007 TRIM35Q9UPQ4 493 aa23.01■■□□□ 1.27
EDC3-215ENST00000569007 LAMB4A4D0S4 1761 aa23■■□□□ 1.27
EDC3-215ENST00000569007 CCDC184Q52MB2 194 aa23■■□□□ 1.27
EDC3-215ENST00000569007 BABAM1Q9NWV8 329 aa22.99■■□□□ 1.27
EDC3-215ENST00000569007 AFDNP55196 1824 aaKnown RBP22.98■■□□□ 1.27
EDC3-215ENST00000569007 KCNA3P22001 575 aa22.98■■□□□ 1.27
EDC3-215ENST00000569007 BCS1LQ9Y276 419 aa22.98■■□□□ 1.27
EDC3-215ENST00000569007 NRXN2Q9P2S2 1712 aa22.98■■□□□ 1.27
EDC3-215ENST00000569007 CHRNA5P30532 468 aa22.97■■□□□ 1.27
EDC3-215ENST00000569007 ZNF784Q8NCA9 323 aaPredicted RBP22.97■■□□□ 1.27
EDC3-215ENST00000569007 ANP32CO43423 234 aa22.96■■□□□ 1.27
EDC3-215ENST00000569007 BCORQ6W2J9 1755 aa22.96■■□□□ 1.27
EDC3-215ENST00000569007 APAF1O14727 1248 aa22.95■■□□□ 1.26
EDC3-215ENST00000569007 CARMIL3Q8ND23 1372 aa22.95■■□□□ 1.26
EDC3-215ENST00000569007 SETDB2Q96T68 719 aa22.95■■□□□ 1.26
EDC3-215ENST00000569007 PIM2Q9P1W9 311 aa22.95■■□□□ 1.26
EDC3-215ENST00000569007 LAS1LQ9Y4W2 734 aaKnown RBP22.95■■□□□ 1.26
EDC3-215ENST00000569007 CHL1O00533 1208 aa22.94■■□□□ 1.26
EDC3-215ENST00000569007 CLEC4GQ6UXB4 293 aa22.94■■□□□ 1.26
EDC3-215ENST00000569007 NGEFQ8N5V2 710 aa22.94■■□□□ 1.26
EDC3-215ENST00000569007 ZNF652Q9Y2D9 606 aa22.93■■□□□ 1.26
EDC3-215ENST00000569007 BRCA1P38398 1863 aaKnown RBP22.93■■□□□ 1.26
EDC3-215ENST00000569007 MYL6BP14649 208 aa22.92■■□□□ 1.26
EDC3-215ENST00000569007 PRR5LQ6MZQ0 368 aa22.92■■□□□ 1.26
EDC3-215ENST00000569007 DALRD3Q5D0E6 543 aaKnown RBP22.91■■□□□ 1.26
EDC3-215ENST00000569007 CCDC24Q8N4L8 307 aa22.91■■□□□ 1.26
EDC3-215ENST00000569007 ERBB4Q15303 1308 aa22.9■■□□□ 1.26
EDC3-215ENST00000569007 RGL2O15211 777 aa22.9■■□□□ 1.26
EDC3-215ENST00000569007 EIF2S2P20042 333 aaKnown RBP22.9■■□□□ 1.26
EDC3-215ENST00000569007 MRS2Q9HD23 443 aa22.9■■□□□ 1.26
EDC3-215ENST00000569007 HLFQ16534 295 aa22.89■■□□□ 1.25
EDC3-215ENST00000569007 KRT24Q2M2I5 525 aa22.89■■□□□ 1.25
EDC3-215ENST00000569007 TTLL7Q6ZT98 887 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms