RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 TAF1LQ8IZX4 1826 aa13.15□□□□□ -0.3
HERPUD1-216ENST00000568814 RREB1Q92766 1687 aa13.15□□□□□ -0.31
HERPUD1-216ENST00000568814 ELL2O00472 640 aaPredicted RBP13.14□□□□□ -0.31
HERPUD1-216ENST00000568814 VAMP4O75379 141 aa13.14□□□□□ -0.31
HERPUD1-216ENST00000568814 EN1Q05925 392 aaPredicted RBP13.14□□□□□ -0.31
HERPUD1-216ENST00000568814 ITPK1Q13572 414 aa13.14□□□□□ -0.31
HERPUD1-216ENST00000568814 CCDC30Q5VVM6 783 aa13.14□□□□□ -0.31
HERPUD1-216ENST00000568814 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
HERPUD1-216ENST00000568814 CYP19A1P11511 503 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-216ENST00000568814 EIF2S2P20042 333 aaKnown RBP13.13□□□□□ -0.31
HERPUD1-216ENST00000568814 RC3H1Q5TC82 1133 aaKnown RBP13.13□□□□□ -0.31
HERPUD1-216ENST00000568814 STK31Q9BXU1 1019 aa13.13□□□□□ -0.31
HERPUD1-216ENST00000568814 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
HERPUD1-216ENST00000568814 C4BP0C0L5 1744 aa13.13□□□□□ -0.31
HERPUD1-216ENST00000568814 PRAMEF22A3QJZ6 481 aa13.12□□□□□ -0.31
HERPUD1-216ENST00000568814 CRKLP46109 303 aaKnown RBP13.12□□□□□ -0.31
HERPUD1-216ENST00000568814 EZH2Q15910 746 aaKnown RBP13.12□□□□□ -0.31
HERPUD1-216ENST00000568814 ALDH1L2Q3SY69 923 aa13.12□□□□□ -0.31
HERPUD1-216ENST00000568814 PROM2Q8N271 834 aa13.12□□□□□ -0.31
HERPUD1-216ENST00000568814 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
HERPUD1-216ENST00000568814 LRRC4BQ9NT99 713 aa13.12□□□□□ -0.31
HERPUD1-216ENST00000568814 CCDC87Q9NVE4 849 aa13.12□□□□□ -0.31
HERPUD1-216ENST00000568814 DBF4Q9UBU7 674 aaPredicted RBP13.12□□□□□ -0.31
HERPUD1-216ENST00000568814 CACNA1FO60840 1977 aa13.11□□□□□ -0.31
HERPUD1-216ENST00000568814 R3HDM1Q15032 1099 aaKnown RBP13.11□□□□□ -0.31
HERPUD1-216ENST00000568814 NUP188Q5SRE5 1749 aa13.1□□□□□ -0.31
HERPUD1-216ENST00000568814 KCNQ4P56696 695 aa13.1□□□□□ -0.31
HERPUD1-216ENST00000568814 NPM2Q86SE8 214 aaKnown RBP13.1□□□□□ -0.31
HERPUD1-216ENST00000568814 AK7Q96M32 723 aa13.1□□□□□ -0.31
HERPUD1-216ENST00000568814 DDX21Q9NR30 783 aaKnown RBP eCLIP13.1□□□□□ -0.31
HERPUD1-216ENST00000568814 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
HERPUD1-216ENST00000568814 CENPBP07199 599 aaPredicted RBP13.09□□□□□ -0.31
HERPUD1-216ENST00000568814 IL6STP40189 918 aaPredicted RBP13.09□□□□□ -0.31
HERPUD1-216ENST00000568814 RARSP54136 660 aaKnown RBP13.09□□□□□ -0.31
HERPUD1-216ENST00000568814 NECTIN2Q92692 538 aa13.09□□□□□ -0.31
HERPUD1-216ENST00000568814 CHPF2Q9P2E5 772 aa13.09□□□□□ -0.31
HERPUD1-216ENST00000568814 ZBTB1Q9Y2K1 713 aa13.09□□□□□ -0.31
HERPUD1-216ENST00000568814 RPS6KA4O75676 772 aa13.08□□□□□ -0.32
HERPUD1-216ENST00000568814 A1BGP04217 495 aa13.08□□□□□ -0.32
HERPUD1-216ENST00000568814 INTS5Q6P9B9 1019 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-216ENST00000568814 SSH1Q8WYL5 1049 aa13.08□□□□□ -0.32
HERPUD1-216ENST00000568814 SMC4Q9NTJ3 1288 aa13.08□□□□□ -0.32
HERPUD1-216ENST00000568814 RCAN3Q9UKA8 241 aa13.08□□□□□ -0.32
HERPUD1-216ENST00000568814 MYH14Q7Z406 1995 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-216ENST00000568814 KIF16BQ96L93 1317 aa13.08□□□□□ -0.32
HERPUD1-216ENST00000568814 A0A087WZG4 1122 aa13.07□□□□□ -0.32
HERPUD1-216ENST00000568814 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
HERPUD1-216ENST00000568814 GNPATO15228 680 aa13.07□□□□□ -0.32
HERPUD1-216ENST00000568814 ADRA2BP18089 450 aa13.07□□□□□ -0.32
HERPUD1-216ENST00000568814 CANXP27824 592 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-216ENST00000568814 BRPF1P55201 1214 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-216ENST00000568814 PDIA6Q15084 440 aa13.07□□□□□ -0.32
HERPUD1-216ENST00000568814 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
HERPUD1-216ENST00000568814 NBPF10Q6P3W6 841 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-216ENST00000568814 NBPF15Q8N660 670 aa13.07□□□□□ -0.32
HERPUD1-216ENST00000568814 STK32BQ9NY57 414 aa13.07□□□□□ -0.32
HERPUD1-216ENST00000568814 RTCBQ9Y3I0 505 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-216ENST00000568814 COL15A1P39059 1388 aa13.07□□□□□ -0.32
HERPUD1-216ENST00000568814 UBR3Q6ZT12 1888 aa13.06□□□□□ -0.32
HERPUD1-216ENST00000568814 SLC4A2P04920 1241 aa13.06□□□□□ -0.32
HERPUD1-216ENST00000568814 SSFA2P28290 1259 aa13.06□□□□□ -0.32
HERPUD1-216ENST00000568814 EIF5P55010 431 aaKnown RBP13.06□□□□□ -0.32
HERPUD1-216ENST00000568814 FLAD1Q8NFF5 587 aa13.06□□□□□ -0.32
HERPUD1-216ENST00000568814 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
HERPUD1-216ENST00000568814 QSER1Q2KHR3 1735 aa13.05□□□□□ -0.32
HERPUD1-216ENST00000568814 MYL6BP14649 208 aa13.05□□□□□ -0.32
HERPUD1-216ENST00000568814 PROSER3Q2NL68 480 aa13.05□□□□□ -0.32
HERPUD1-216ENST00000568814 MRPL50Q8N5N7 158 aaKnown RBP13.05□□□□□ -0.32
HERPUD1-216ENST00000568814 TFCP2L1Q9NZI6 479 aa13.05□□□□□ -0.32
HERPUD1-216ENST00000568814 TCERG1O14776 1098 aaKnown RBP13.04□□□□□ -0.32
HERPUD1-216ENST00000568814 RGL2O15211 777 aa13.04□□□□□ -0.32
HERPUD1-216ENST00000568814 IPO8O15397 1037 aaKnown RBP13.04□□□□□ -0.32
HERPUD1-216ENST00000568814 DDX58O95786 925 aaKnown RBP13.04□□□□□ -0.32
HERPUD1-216ENST00000568814 PIP4K2AP48426 406 aaPredicted RBP13.04□□□□□ -0.32
HERPUD1-216ENST00000568814 FLIIQ13045 1269 aa13.04□□□□□ -0.32
HERPUD1-216ENST00000568814 SLC15A2Q16348 729 aa13.04□□□□□ -0.32
HERPUD1-216ENST00000568814 ZNF827Q17R98 1081 aa13.04□□□□□ -0.32
HERPUD1-216ENST00000568814 LRP10Q7Z4F1 713 aa13.04□□□□□ -0.32
HERPUD1-216ENST00000568814 BCL2L13Q9BXK5 485 aa13.04□□□□□ -0.32
HERPUD1-216ENST00000568814 ZNF330Q9Y3S2 320 aaPredicted RBP13.04□□□□□ -0.32
HERPUD1-216ENST00000568814 PTPRCP08575 1304 aa13.04□□□□□ -0.32
HERPUD1-216ENST00000568814 ANXA1P04083 346 aa13.03□□□□□ -0.32
HERPUD1-216ENST00000568814 TRAPPC3LQ5T215 181 aa13.03□□□□□ -0.32
HERPUD1-216ENST00000568814 KIF6Q6ZMV9 814 aa13.03□□□□□ -0.32
HERPUD1-216ENST00000568814 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.03□□□□□ -0.32
HERPUD1-216ENST00000568814 XAGE3Q8WTP9 111 aa13.03□□□□□ -0.32
HERPUD1-216ENST00000568814 ARHGAP45Q92619 1136 aa13.03□□□□□ -0.32
HERPUD1-216ENST00000568814 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
HERPUD1-216ENST00000568814 TUBGCP6Q96RT7 1819 aa13.02□□□□□ -0.32
HERPUD1-216ENST00000568814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-216ENST00000568814 BCAR3O75815 825 aa13.02□□□□□ -0.33
HERPUD1-216ENST00000568814 FKBP5Q13451 457 aaPredicted RBP13.02□□□□□ -0.33
HERPUD1-216ENST00000568814 COPS6Q7L5N1 327 aa13.02□□□□□ -0.33
HERPUD1-216ENST00000568814 DZIP3Q86Y13 1208 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-216ENST00000568814 PHAXQ9H814 394 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-216ENST00000568814 SCN7AQ01118 1682 aa13.02□□□□□ -0.33
HERPUD1-216ENST00000568814 C4AP0C0L4 1744 aa13.02□□□□□ -0.33
HERPUD1-216ENST00000568814 ERVV-1B6SEH8 477 aa13.01□□□□□ -0.33
HERPUD1-216ENST00000568814 PHF14O94880 888 aa13.01□□□□□ -0.33
HERPUD1-216ENST00000568814 RFC4P35249 363 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms