RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	HEG1	Q9ULI3	1381 aa		13.68	□□□□□ -0.22
UBR1-207	ENST00000568782	C4A	P0C0L4	1744 aa		13.67	□□□□□ -0.22
UBR1-207	ENST00000568782	GYS1	P13807	737 aa		13.67	□□□□□ -0.22
UBR1-207	ENST00000568782	NFE2L2	Q16236	605 aa		13.67	□□□□□ -0.22
UBR1-207	ENST00000568782	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.67	□□□□□ -0.22
UBR1-207	ENST00000568782	KCP	Q6ZWJ8	1503 aa		13.67	□□□□□ -0.22
UBR1-207	ENST00000568782	USP42	Q9H9J4	1324 aa	Known RBP	13.66	□□□□□ -0.22
UBR1-207	ENST00000568782	SNRPA1	P09661	255 aa	Known RBP	13.66	□□□□□ -0.22
UBR1-207	ENST00000568782	LMOD3	Q0VAK6	560 aa		13.66	□□□□□ -0.22
UBR1-207	ENST00000568782	SOS1	Q07889	1333 aa	Predicted RBP	13.65	□□□□□ -0.22
UBR1-207	ENST00000568782	TGFB2	P61812	414 aa		13.65	□□□□□ -0.22
UBR1-207	ENST00000568782	DCTN1	Q14203	1278 aa		13.65	□□□□□ -0.22
UBR1-207	ENST00000568782	NARF	Q9UHQ1	456 aa		13.65	□□□□□ -0.22
UBR1-207	ENST00000568782	ZBTB1	Q9Y2K1	713 aa		13.65	□□□□□ -0.22
UBR1-207	ENST00000568782	COL15A1	P39059	1388 aa		13.65	□□□□□ -0.22
UBR1-207	ENST00000568782	RIPK4	P57078	832 aa		13.64	□□□□□ -0.23
UBR1-207	ENST00000568782	USPL1	Q5W0Q7	1092 aa		13.64	□□□□□ -0.23
UBR1-207	ENST00000568782	PLEKHF1	Q96S99	279 aa		13.64	□□□□□ -0.23
UBR1-207	ENST00000568782	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.64	□□□□□ -0.23
UBR1-207	ENST00000568782	SRP68	Q9UHB9	627 aa	Known RBP	13.64	□□□□□ -0.23
UBR1-207	ENST00000568782	NPHP1	O15259	732 aa		13.63	□□□□□ -0.23
UBR1-207	ENST00000568782	IL6ST	P40189	918 aa	Predicted RBP	13.63	□□□□□ -0.23
UBR1-207	ENST00000568782	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.62	□□□□□ -0.23
UBR1-207	ENST00000568782	FKBP8	Q14318	412 aa		13.62	□□□□□ -0.23
UBR1-207	ENST00000568782	KCNQ3	O43525	872 aa		13.61	□□□□□ -0.23
UBR1-207	ENST00000568782	EIF5	P55010	431 aa	Known RBP	13.61	□□□□□ -0.23
UBR1-207	ENST00000568782	RUNDC1	Q96C34	613 aa		13.61	□□□□□ -0.23
UBR1-207	ENST00000568782	KIF13B	Q9NQT8	1826 aa		13.61	□□□□□ -0.23
UBR1-207	ENST00000568782	A1BG	P04217	495 aa		13.6	□□□□□ -0.23
UBR1-207	ENST00000568782	NEUROD2	Q15784	382 aa		13.6	□□□□□ -0.23
UBR1-207	ENST00000568782	ZNF652	Q9Y2D9	606 aa		13.6	□□□□□ -0.23
UBR1-207	ENST00000568782	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.6	□□□□□ -0.23
UBR1-207	ENST00000568782	YBX3	P16989	372 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
UBR1-207	ENST00000568782	TM4SF1	P30408	202 aa		13.59	□□□□□ -0.23
UBR1-207	ENST00000568782	TMPO	P42166	694 aa	Known RBP	13.59	□□□□□ -0.23
UBR1-207	ENST00000568782	BICDL1	Q6ZP65	573 aa		13.59	□□□□□ -0.23
UBR1-207	ENST00000568782	CCDC146	Q8IYE0	955 aa		13.59	□□□□□ -0.23
UBR1-207	ENST00000568782	MIS18A	Q9NYP9	233 aa		13.59	□□□□□ -0.23
UBR1-207	ENST00000568782	TSPYL4	Q9UJ04	414 aa		13.59	□□□□□ -0.23
UBR1-207	ENST00000568782	WWC3	Q9ULE0	1092 aa		13.59	□□□□□ -0.23
UBR1-207	ENST00000568782	TBC1D2B	Q9UPU7	963 aa		13.59	□□□□□ -0.23
UBR1-207	ENST00000568782	BCS1L	Q9Y276	419 aa		13.59	□□□□□ -0.23
UBR1-207	ENST00000568782	USP16	Q9Y5T5	823 aa		13.59	□□□□□ -0.23
UBR1-207	ENST00000568782		A0A0G2JLW4	131 aa		13.58	□□□□□ -0.24
UBR1-207	ENST00000568782	ANP32C	O43423	234 aa		13.58	□□□□□ -0.24
UBR1-207	ENST00000568782	SERPINB2	P05120	415 aa		13.58	□□□□□ -0.24
UBR1-207	ENST00000568782	DZIP3	Q86Y13	1208 aa	Known RBP	13.58	□□□□□ -0.24
UBR1-207	ENST00000568782	SETDB2	Q96T68	719 aa		13.58	□□□□□ -0.24
UBR1-207	ENST00000568782	BABAM1	Q9NWV8	329 aa		13.58	□□□□□ -0.24
UBR1-207	ENST00000568782	PIM2	Q9P1W9	311 aa		13.58	□□□□□ -0.24
UBR1-207	ENST00000568782	C10orf71	Q711Q0	1435 aa		13.57	□□□□□ -0.24
UBR1-207	ENST00000568782	POLRMT	O00411	1230 aa	Known RBP	13.57	□□□□□ -0.24
UBR1-207	ENST00000568782	NFIX	Q14938	502 aa		13.57	□□□□□ -0.24
UBR1-207	ENST00000568782	ADAMTS8	Q9UP79	889 aa		13.57	□□□□□ -0.24
UBR1-207	ENST00000568782	AFDN	P55196	1824 aa	Known RBP	13.57	□□□□□ -0.24
UBR1-207	ENST00000568782	KDM3B	Q7LBC6	1761 aa		13.56	□□□□□ -0.24
UBR1-207	ENST00000568782	DPEP1	P16444	411 aa		13.56	□□□□□ -0.24
UBR1-207	ENST00000568782	DDR1	Q08345	913 aa		13.56	□□□□□ -0.24
UBR1-207	ENST00000568782	THUMPD2	Q9BTF0	503 aa	Known RBP	13.56	□□□□□ -0.24
UBR1-207	ENST00000568782	LAMB4	A4D0S4	1761 aa		13.55	□□□□□ -0.24
UBR1-207	ENST00000568782	EIF4A1	P60842	406 aa	Known RBP	13.55	□□□□□ -0.24
UBR1-207	ENST00000568782	DALRD3	Q5D0E6	543 aa	Known RBP	13.55	□□□□□ -0.24
UBR1-207	ENST00000568782	CLEC4G	Q6UXB4	293 aa		13.55	□□□□□ -0.24
UBR1-207	ENST00000568782	PDZRN3	Q9UPQ7	1066 aa		13.55	□□□□□ -0.24
UBR1-207	ENST00000568782	RRP7A	Q9Y3A4	280 aa	Known RBP	13.55	□□□□□ -0.24
UBR1-207	ENST00000568782	LAS1L	Q9Y4W2	734 aa	Known RBP	13.55	□□□□□ -0.24
UBR1-207	ENST00000568782	CARMIL3	Q8ND23	1372 aa		13.55	□□□□□ -0.24
UBR1-207	ENST00000568782	PXDNL	A1KZ92	1463 aa		13.55	□□□□□ -0.24
UBR1-207	ENST00000568782	PRAMEF22	A3QJZ6	481 aa		13.54	□□□□□ -0.24
UBR1-207	ENST00000568782		H0YIN7	160 aa		13.54	□□□□□ -0.24
UBR1-207	ENST00000568782	GIGYF1	O75420	1035 aa	Predicted RBP	13.54	□□□□□ -0.24
UBR1-207	ENST00000568782	ST5	P78524	1137 aa		13.54	□□□□□ -0.24
UBR1-207	ENST00000568782	CALD1	Q05682	793 aa	Known RBP	13.54	□□□□□ -0.24
UBR1-207	ENST00000568782	KIF6	Q6ZMV9	814 aa		13.54	□□□□□ -0.24
UBR1-207	ENST00000568782	ARHGAP27	Q6ZUM4	889 aa		13.54	□□□□□ -0.24
UBR1-207	ENST00000568782	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.54	□□□□□ -0.24
UBR1-207	ENST00000568782	GTF2E1	P29083	439 aa	Predicted RBP	13.53	□□□□□ -0.24
UBR1-207	ENST00000568782	PDE6B	P35913	854 aa		13.53	□□□□□ -0.24
UBR1-207	ENST00000568782	PIP4K2A	P48426	406 aa	Predicted RBP	13.53	□□□□□ -0.24
UBR1-207	ENST00000568782	TBC1D9B	Q66K14	1250 aa		13.53	□□□□□ -0.24
UBR1-207	ENST00000568782	NGEF	Q8N5V2	710 aa		13.53	□□□□□ -0.24
UBR1-207	ENST00000568782	CNBD1	Q8NA66	436 aa		13.53	□□□□□ -0.24
UBR1-207	ENST00000568782	BCL2L12	Q9HB09	334 aa		13.53	□□□□□ -0.24
UBR1-207	ENST00000568782	SCN7A	Q01118	1682 aa		13.53	□□□□□ -0.24
UBR1-207	ENST00000568782	CAMTA2	O94983	1202 aa		13.52	□□□□□ -0.25
UBR1-207	ENST00000568782	ARFGEF1	Q9Y6D6	1849 aa		13.52	□□□□□ -0.25
UBR1-207	ENST00000568782	BRCA1	P38398	1863 aa	Known RBP	13.52	□□□□□ -0.25
UBR1-207	ENST00000568782	GOLGB1	Q14789	3259 aa	Known RBP	13.52	□□□□□ -0.25
UBR1-207	ENST00000568782	BCOR	Q6W2J9	1755 aa		13.51	□□□□□ -0.25
UBR1-207	ENST00000568782	ERBB4	Q15303	1308 aa		13.51	□□□□□ -0.25
UBR1-207	ENST00000568782	RGL2	O15211	777 aa		13.51	□□□□□ -0.25
UBR1-207	ENST00000568782	MYL6B	P14649	208 aa		13.51	□□□□□ -0.25
UBR1-207	ENST00000568782	EIF2S2	P20042	333 aa	Known RBP	13.51	□□□□□ -0.25
UBR1-207	ENST00000568782	CHRNA5	P30532	468 aa		13.51	□□□□□ -0.25
UBR1-207	ENST00000568782	TPTE2	Q6XPS3	522 aa		13.51	□□□□□ -0.25
UBR1-207	ENST00000568782	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.51	□□□□□ -0.25
UBR1-207	ENST00000568782	C2CD5	Q86YS7	1000 aa		13.51	□□□□□ -0.25
UBR1-207	ENST00000568782	BRIP1	Q9BX63	1249 aa		13.51	□□□□□ -0.25
UBR1-207	ENST00000568782	NRXN2	Q9P2S2	1712 aa		13.5	□□□□□ -0.25
UBR1-207	ENST00000568782	TTLL6	Q8N841	843 aa		13.5	□□□□□ -0.25

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