RNA–Protein interactions for RNA: ENST00000568468.5

GINS3-210, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-210ENST00000568468 A0A0G2JS52 829 aa7.95□□□□□ -1.14
GINS3-210ENST00000568468 MYT1Q01538 1121 aa7.95□□□□□ -1.14
GINS3-210ENST00000568468 GAS2L2Q8NHY3 880 aa7.95□□□□□ -1.14
GINS3-210ENST00000568468 DDX54Q8TDD1 881 aaKnown RBP7.95□□□□□ -1.14
GINS3-210ENST00000568468 LAS1LQ9Y4W2 734 aaKnown RBP7.95□□□□□ -1.14
GINS3-210ENST00000568468 ZNF521Q96K83 1311 aa7.95□□□□□ -1.14
GINS3-210ENST00000568468 OVOS2A0A0G2JMS6 1433 aa7.95□□□□□ -1.14
GINS3-210ENST00000568468 MFSD10Q14728 455 aa7.94□□□□□ -1.14
GINS3-210ENST00000568468 C1orf141Q5JVX7 400 aa7.94□□□□□ -1.14
GINS3-210ENST00000568468 MPRIPQ6WCQ1 1025 aa7.94□□□□□ -1.14
GINS3-210ENST00000568468 ZCRB1Q8TBF4 217 aaKnown RBP7.94□□□□□ -1.14
GINS3-210ENST00000568468 UPF1Q92900 1129 aaKnown RBP eCLIP7.94□□□□□ -1.14
GINS3-210ENST00000568468 LGR6Q9HBX8 967 aa7.94□□□□□ -1.14
GINS3-210ENST00000568468 SPG7Q9UQ90 795 aa7.94□□□□□ -1.14
GINS3-210ENST00000568468 MAP3K5Q99683 1374 aa7.94□□□□□ -1.14
GINS3-210ENST00000568468 C2orf72A6NCS6 295 aa7.93□□□□□ -1.14
GINS3-210ENST00000568468 GNAT3A8MTJ3 354 aa7.93□□□□□ -1.14
GINS3-210ENST00000568468 CYP27B1O15528 508 aa7.93□□□□□ -1.14
GINS3-210ENST00000568468 RNMTO43148 476 aaKnown RBP7.93□□□□□ -1.14
GINS3-210ENST00000568468 PHKG2P15735 406 aa7.93□□□□□ -1.14
GINS3-210ENST00000568468 DOK7Q18PE1 504 aa7.93□□□□□ -1.14
GINS3-210ENST00000568468 AMOTQ4VCS5 1084 aa7.93□□□□□ -1.14
GINS3-210ENST00000568468 KRT27Q7Z3Y8 459 aa7.93□□□□□ -1.14
GINS3-210ENST00000568468 IL17REQ8NFR9 667 aa7.93□□□□□ -1.14
GINS3-210ENST00000568468 RTF1Q92541 710 aaKnown RBP7.93□□□□□ -1.14
GINS3-210ENST00000568468 TSR2Q969E8 191 aaKnown RBP7.93□□□□□ -1.14
GINS3-210ENST00000568468 MIS18AQ9NYP9 233 aa7.93□□□□□ -1.14
GINS3-210ENST00000568468 BRWD3Q6RI45 1802 aa7.93□□□□□ -1.14
GINS3-210ENST00000568468 EP400Q96L91 3159 aa7.93□□□□□ -1.14
GINS3-210ENST00000568468 PARP4Q9UKK3 1724 aaKnown RBP7.92□□□□□ -1.14
GINS3-210ENST00000568468 FOXK1P85037 733 aa7.92□□□□□ -1.14
GINS3-210ENST00000568468 LMOD3Q0VAK6 560 aa7.92□□□□□ -1.14
GINS3-210ENST00000568468 CCDC27Q2M243 656 aa7.92□□□□□ -1.14
GINS3-210ENST00000568468 AKAP4Q5JQC9 854 aa7.92□□□□□ -1.14
GINS3-210ENST00000568468 LRRC37A3O60309 1634 aa7.92□□□□□ -1.14
GINS3-210ENST00000568468 WNK3Q9BYP7 1800 aa7.92□□□□□ -1.14
GINS3-210ENST00000568468 EXOC5O00471 708 aa7.91□□□□□ -1.14
GINS3-210ENST00000568468 CENPBP07199 599 aaPredicted RBP7.91□□□□□ -1.14
GINS3-210ENST00000568468 PDE4AP27815 886 aa7.91□□□□□ -1.14
GINS3-210ENST00000568468 SLFN5Q08AF3 891 aa7.91□□□□□ -1.14
GINS3-210ENST00000568468 FAM182BQ5T319 152 aa7.91□□□□□ -1.14
GINS3-210ENST00000568468 IFNL2Q8IZJ0 200 aa7.91□□□□□ -1.14
GINS3-210ENST00000568468 CDCA7Q9BWT1 371 aaPredicted RBP7.91□□□□□ -1.14
GINS3-210ENST00000568468 PCDH11XQ9BZA7 1347 aa7.91□□□□□ -1.14
GINS3-210ENST00000568468 PCDH11YQ9BZA8 1340 aa7.91□□□□□ -1.14
GINS3-210ENST00000568468 KDM6AO15550 1401 aaPredicted RBP7.91□□□□□ -1.14
GINS3-210ENST00000568468 TNS2Q63HR2 1409 aa7.9□□□□□ -1.14
GINS3-210ENST00000568468 FANCIQ9NVI1 1328 aa7.9□□□□□ -1.14
GINS3-210ENST00000568468 RIMBP2O15034 1052 aa7.9□□□□□ -1.14
GINS3-210ENST00000568468 HOXB3P14651 431 aaPredicted RBP7.9□□□□□ -1.14
GINS3-210ENST00000568468 DDB1Q16531 1140 aa7.9□□□□□ -1.14
GINS3-210ENST00000568468 DUSP27Q5VZP5 1158 aa7.9□□□□□ -1.14
GINS3-210ENST00000568468 WDR63Q8IWG1 891 aa7.9□□□□□ -1.14
GINS3-210ENST00000568468 MARCH10Q8NA82 808 aaPredicted RBP7.9□□□□□ -1.14
GINS3-210ENST00000568468 BCL9O00512 1426 aa7.89□□□□□ -1.15
GINS3-210ENST00000568468 E9PSI1 815 aa7.89□□□□□ -1.15
GINS3-210ENST00000568468 KCNQ3O43525 872 aa7.89□□□□□ -1.15
GINS3-210ENST00000568468 KRT24Q2M2I5 525 aa7.89□□□□□ -1.15
GINS3-210ENST00000568468 ZNF710Q8N1W2 664 aa7.89□□□□□ -1.15
GINS3-210ENST00000568468 NGEFQ8N5V2 710 aa7.89□□□□□ -1.15
GINS3-210ENST00000568468 ACSBG1Q96GR2 724 aa7.89□□□□□ -1.15
GINS3-210ENST00000568468 MBIPQ9NS73 344 aa7.89□□□□□ -1.15
GINS3-210ENST00000568468 CEMIPQ8WUJ3 1361 aa7.88□□□□□ -1.15
GINS3-210ENST00000568468 ELL2O00472 640 aaPredicted RBP7.88□□□□□ -1.15
GINS3-210ENST00000568468 HTATSF1O43719 755 aaKnown RBP7.88□□□□□ -1.15
GINS3-210ENST00000568468 ZNF853P0CG23 659 aa7.88□□□□□ -1.15
GINS3-210ENST00000568468 EXOSC9Q06265 439 aaKnown RBP7.88□□□□□ -1.15
GINS3-210ENST00000568468 TEFQ10587 303 aa7.88□□□□□ -1.15
GINS3-210ENST00000568468 PDE3BQ13370 1112 aa7.88□□□□□ -1.15
GINS3-210ENST00000568468 SLC39A6Q13433 755 aa7.88□□□□□ -1.15
GINS3-210ENST00000568468 DSG2Q14126 1118 aa7.88□□□□□ -1.15
GINS3-210ENST00000568468 TMC2Q8TDI7 906 aa7.88□□□□□ -1.15
GINS3-210ENST00000568468 SYTL4Q96C24 671 aaPredicted RBP7.88□□□□□ -1.15
GINS3-210ENST00000568468 MYH16Q9H6N6 1097 aa7.88□□□□□ -1.15
GINS3-210ENST00000568468 IFT57Q9NWB7 429 aa7.88□□□□□ -1.15
GINS3-210ENST00000568468 TSPYL4Q9UJ04 414 aa7.88□□□□□ -1.15
GINS3-210ENST00000568468 PKD1L3Q7Z443 1732 aa7.88□□□□□ -1.15
GINS3-210ENST00000568468 DLG5Q8TDM6 1919 aa7.88□□□□□ -1.15
GINS3-210ENST00000568468 SHANK3Q9BYB0 1731 aa7.87□□□□□ -1.15
GINS3-210ENST00000568468 IL16Q14005 1332 aa7.87□□□□□ -1.15
GINS3-210ENST00000568468 CHL1O00533 1208 aa7.87□□□□□ -1.15
GINS3-210ENST00000568468 TCERG1O14776 1098 aaKnown RBP7.87□□□□□ -1.15
GINS3-210ENST00000568468 SLC34A2O95436 690 aa7.87□□□□□ -1.15
GINS3-210ENST00000568468 CABP4P57796 275 aa7.87□□□□□ -1.15
GINS3-210ENST00000568468 GNAI1P63096 354 aa7.87□□□□□ -1.15
GINS3-210ENST00000568468 CALD1Q05682 793 aaKnown RBP7.87□□□□□ -1.15
GINS3-210ENST00000568468 FAM196AQ6ZSG2 479 aa7.87□□□□□ -1.15
GINS3-210ENST00000568468 CCDC125Q86Z20 511 aa7.87□□□□□ -1.15
GINS3-210ENST00000568468 TRMT2AQ8IZ69 625 aaKnown RBP7.87□□□□□ -1.15
GINS3-210ENST00000568468 TSPYL6Q8N831 410 aa7.87□□□□□ -1.15
GINS3-210ENST00000568468 NFATC2IPQ8NCF5 419 aa7.87□□□□□ -1.15
GINS3-210ENST00000568468 DCAF5Q96JK2 942 aa7.87□□□□□ -1.15
GINS3-210ENST00000568468 SLC52A2Q9HAB3 445 aa7.87□□□□□ -1.15
GINS3-210ENST00000568468 BTBD11A6QL63 1104 aa7.86□□□□□ -1.15
GINS3-210ENST00000568468 HSP90AB1P08238 724 aaKnown RBP7.86□□□□□ -1.15
GINS3-210ENST00000568468 PRIM1P49642 420 aaKnown RBP7.86□□□□□ -1.15
GINS3-210ENST00000568468 EMP3P54852 163 aa7.86□□□□□ -1.15
GINS3-210ENST00000568468 CAMK2BQ13554 666 aa7.86□□□□□ -1.15
GINS3-210ENST00000568468 TAF7Q15545 349 aaPredicted RBP7.86□□□□□ -1.15
GINS3-210ENST00000568468 PTF1AQ7RTS3 328 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms