RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 MAP3K5Q99683 1374 aa6.31□□□□□ -1.4
HERPUD1-213ENST00000568358 RIOK3O14730 519 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-213ENST00000568358 ATMINO43313 823 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-213ENST00000568358 PHF14O94880 888 aa6.31□□□□□ -1.4
HERPUD1-213ENST00000568358 SSFA2P28290 1259 aa6.31□□□□□ -1.4
HERPUD1-213ENST00000568358 MTHFSP49914 203 aa6.31□□□□□ -1.4
HERPUD1-213ENST00000568358 MSL1Q68DK7 614 aa6.31□□□□□ -1.4
HERPUD1-213ENST00000568358 ZNF530Q6P9A1 599 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-213ENST00000568358 KIF12Q96FN5 646 aa6.31□□□□□ -1.4
HERPUD1-213ENST00000568358 PLEKHG2Q9H7P9 1386 aa6.31□□□□□ -1.4
HERPUD1-213ENST00000568358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.3□□□□□ -1.4
HERPUD1-213ENST00000568358 GNPATO15228 680 aa6.3□□□□□ -1.4
HERPUD1-213ENST00000568358 TRAPPC3LQ5T215 181 aa6.3□□□□□ -1.4
HERPUD1-213ENST00000568358 SULT6B1Q6IMI4 303 aa6.3□□□□□ -1.4
HERPUD1-213ENST00000568358 METRNQ9UJH8 293 aa6.3□□□□□ -1.4
HERPUD1-213ENST00000568358 ASAP1Q9ULH1 1129 aa6.3□□□□□ -1.4
HERPUD1-213ENST00000568358 RTCBQ9Y3I0 505 aaKnown RBP6.3□□□□□ -1.4
HERPUD1-213ENST00000568358 CD2APQ9Y5K6 639 aa6.3□□□□□ -1.4
HERPUD1-213ENST00000568358 C4BP0C0L5 1744 aa6.3□□□□□ -1.4
HERPUD1-213ENST00000568358 IGSF1Q8N6C5 1336 aa6.29□□□□□ -1.4
HERPUD1-213ENST00000568358 RFC4P35249 363 aa6.29□□□□□ -1.4
HERPUD1-213ENST00000568358 NCAPD2Q15021 1401 aa6.29□□□□□ -1.4
HERPUD1-213ENST00000568358 COL24A1Q17RW2 1714 aa6.29□□□□□ -1.4
HERPUD1-213ENST00000568358 RASEFQ8IZ41 740 aa6.29□□□□□ -1.4
HERPUD1-213ENST00000568358 ZNF784Q8NCA9 323 aaPredicted RBP6.29□□□□□ -1.4
HERPUD1-213ENST00000568358 ATG3Q9NT62 314 aa6.29□□□□□ -1.4
HERPUD1-213ENST00000568358 UBR3Q6ZT12 1888 aa6.28□□□□□ -1.4
HERPUD1-213ENST00000568358 TESPA1A2RU30 521 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-213ENST00000568358 CC2D1BQ5T0F9 858 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-213ENST00000568358 RC3H1Q5TC82 1133 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-213ENST00000568358 NLGN1Q8N2Q7 840 aa6.28□□□□□ -1.4
HERPUD1-213ENST00000568358 NFATC2IPQ8NCF5 419 aa6.28□□□□□ -1.4
HERPUD1-213ENST00000568358 LINC00116Q8NCU8 138 aa6.28□□□□□ -1.4
HERPUD1-213ENST00000568358 NLGN2Q8NFZ4 835 aa6.28□□□□□ -1.4
HERPUD1-213ENST00000568358 TOGARAM1Q9Y4F4 1720 aa6.28□□□□□ -1.4
HERPUD1-213ENST00000568358 KIF7Q2M1P5 1343 aa6.27□□□□□ -1.41
HERPUD1-213ENST00000568358 DIAPH1O60610 1272 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-213ENST00000568358 PTCD1O75127 700 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-213ENST00000568358 IL13P35225 146 aa6.27□□□□□ -1.41
HERPUD1-213ENST00000568358 TIE1P35590 1138 aa6.27□□□□□ -1.41
HERPUD1-213ENST00000568358 CNGB1Q14028 1251 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-213ENST00000568358 AKAP4Q5JQC9 854 aa6.27□□□□□ -1.41
HERPUD1-213ENST00000568358 MAMSTRQ6ZN01 415 aa6.27□□□□□ -1.41
HERPUD1-213ENST00000568358 ARHGEF1Q92888 912 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-213ENST00000568358 FAM212AQ96EL1 285 aa6.27□□□□□ -1.41
HERPUD1-213ENST00000568358 MAP3K13O43283 966 aa6.26□□□□□ -1.41
HERPUD1-213ENST00000568358 ZPR1O75312 459 aa6.26□□□□□ -1.41
HERPUD1-213ENST00000568358 GIGYF1O75420 1035 aaPredicted RBP6.26□□□□□ -1.41
HERPUD1-213ENST00000568358 RPS6KA4O75676 772 aa6.26□□□□□ -1.41
HERPUD1-213ENST00000568358 MMP10P09238 476 aa6.26□□□□□ -1.41
HERPUD1-213ENST00000568358 HMOX1P09601 288 aa6.26□□□□□ -1.41
HERPUD1-213ENST00000568358 PDIA4P13667 645 aaKnown RBP6.26□□□□□ -1.41
HERPUD1-213ENST00000568358 ITPK1Q13572 414 aa6.26□□□□□ -1.41
HERPUD1-213ENST00000568358 GSE1Q14687 1217 aa6.26□□□□□ -1.41
HERPUD1-213ENST00000568358 AEBP1Q8IUX7 1158 aa6.26□□□□□ -1.41
HERPUD1-213ENST00000568358 OTUD5Q96G74 571 aa6.26□□□□□ -1.41
HERPUD1-213ENST00000568358 CFAP53Q96M91 514 aa6.26□□□□□ -1.41
HERPUD1-213ENST00000568358 PARP3Q9Y6F1 533 aa6.26□□□□□ -1.41
HERPUD1-213ENST00000568358 VIRMAQ69YN4 1812 aaKnown RBP6.26□□□□□ -1.41
HERPUD1-213ENST00000568358 U2SURPO15042 1029 aaKnown RBP6.25□□□□□ -1.41
HERPUD1-213ENST00000568358 YBX3P16989 372 aaKnown RBP eCLIP6.25□□□□□ -1.41
HERPUD1-213ENST00000568358 TGFB2P61812 414 aa6.25□□□□□ -1.41
HERPUD1-213ENST00000568358 SMIM5Q71RC9 77 aa6.25□□□□□ -1.41
HERPUD1-213ENST00000568358 SLC52A2Q9HAB3 445 aa6.25□□□□□ -1.41
HERPUD1-213ENST00000568358 CCDC87Q9NVE4 849 aa6.25□□□□□ -1.41
HERPUD1-213ENST00000568358 NUDCQ9Y266 331 aa6.25□□□□□ -1.41
HERPUD1-213ENST00000568358 SCN11AQ9UI33 1791 aa6.25□□□□□ -1.41
HERPUD1-213ENST00000568358 CNTNAP4Q9C0A0 1308 aa6.25□□□□□ -1.41
HERPUD1-213ENST00000568358 MYH14Q7Z406 1995 aaKnown RBP6.24□□□□□ -1.41
HERPUD1-213ENST00000568358 ZNF831Q5JPB2 1677 aa6.24□□□□□ -1.41
HERPUD1-213ENST00000568358 POTEB2H3BUK9 544 aa6.24□□□□□ -1.41
HERPUD1-213ENST00000568358 PER1O15534 1290 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-213ENST00000568358 RNMTO43148 476 aaKnown RBP6.24□□□□□ -1.41
HERPUD1-213ENST00000568358 CRKLP46109 303 aaKnown RBP6.24□□□□□ -1.41
HERPUD1-213ENST00000568358 NUBP1P53384 320 aa6.24□□□□□ -1.41
HERPUD1-213ENST00000568358 ATN1P54259 1190 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-213ENST00000568358 C1QTNF8P60827 252 aa6.24□□□□□ -1.41
HERPUD1-213ENST00000568358 AMIGO3Q86WK7 504 aa6.24□□□□□ -1.41
HERPUD1-213ENST00000568358 TTC5Q8N0Z6 440 aa6.24□□□□□ -1.41
HERPUD1-213ENST00000568358 GPBP1L1Q9HC44 474 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-213ENST00000568358 BMP2KQ9NSY1 1161 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-213ENST00000568358 WWC3Q9ULE0 1092 aa6.24□□□□□ -1.41
HERPUD1-213ENST00000568358 KDRP35968 1356 aa6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 SENP3-EIF4A1A0A087X0R7 540 aa6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 GNAT3A8MTJ3 354 aa6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 STK25O00506 426 aa6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 STARD3NLO95772 234 aa6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 NEFMP07197 916 aa6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 CHRM1P11229 460 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 GYS1P13807 737 aa6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 TEFQ10587 303 aa6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 MTHFSDQ2M296 383 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 GAS2L2Q8NHY3 880 aa6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 SLC4A9Q96Q91 983 aa6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 TEX13AQ9BXU3 409 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 LGR6Q9HBX8 967 aa6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 BCS1LQ9Y276 419 aa6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 PCDHB13Q9Y5F0 798 aa6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 KDM6AO15550 1401 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-213ENST00000568358 COL5A3P25940 1745 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms