RNA–Protein interactions for RNA: ENST00000568331.5

SNAP23-216, Transcript of synaptosome associated protein 23, humanhuman

TSL 4

Gene SNAP23, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-216ENST00000568331 ADAMTS8Q9UP79 889 aa27.75■■■□□ 2.03
SNAP23-216ENST00000568331 ZBTB1Q9Y2K1 713 aa27.75■■■□□ 2.03
SNAP23-216ENST00000568331 ZPR1O75312 459 aa27.74■■■□□ 2.03
SNAP23-216ENST00000568331 MMP10P09238 476 aa27.74■■■□□ 2.03
SNAP23-216ENST00000568331 GYS1P13807 737 aa27.74■■■□□ 2.03
SNAP23-216ENST00000568331 CANXP27824 592 aaKnown RBP27.74■■■□□ 2.03
SNAP23-216ENST00000568331 LMOD3Q0VAK6 560 aa27.74■■■□□ 2.03
SNAP23-216ENST00000568331 ANP32CO43423 234 aa27.73■■■□□ 2.03
SNAP23-216ENST00000568331 TMPOP42166 694 aaKnown RBP27.73■■■□□ 2.03
SNAP23-216ENST00000568331 COL15A1P39059 1388 aa27.73■■■□□ 2.03
SNAP23-216ENST00000568331 USP42Q9H9J4 1324 aaKnown RBP27.72■■■□□ 2.03
SNAP23-216ENST00000568331 THUMPD2Q9BTF0 503 aaKnown RBP27.72■■■□□ 2.03
SNAP23-216ENST00000568331 MIS18AQ9NYP9 233 aa27.72■■■□□ 2.03
SNAP23-216ENST00000568331 SRP68Q9UHB9 627 aaKnown RBP27.72■■■□□ 2.03
SNAP23-216ENST00000568331 CD2APQ9Y5K6 639 aa27.72■■■□□ 2.03
SNAP23-216ENST00000568331 KDM3BQ7LBC6 1761 aa27.71■■■□□ 2.03
SNAP23-216ENST00000568331 SNRPA1P09661 255 aaKnown RBP27.71■■■□□ 2.03
SNAP23-216ENST00000568331 NEUROD2Q15784 382 aa27.7■■■□□ 2.02
SNAP23-216ENST00000568331 NPM2Q86SE8 214 aaKnown RBP27.7■■■□□ 2.02
SNAP23-216ENST00000568331 NLGN2Q8NFZ4 835 aa27.7■■■□□ 2.02
SNAP23-216ENST00000568331 A0A087WZG4 1122 aa27.69■■■□□ 2.02
SNAP23-216ENST00000568331 RRP7AQ9Y3A4 280 aaKnown RBP27.69■■■□□ 2.02
SNAP23-216ENST00000568331 PARP3Q9Y6F1 533 aa27.69■■■□□ 2.02
SNAP23-216ENST00000568331 USPL1Q5W0Q7 1092 aa27.68■■■□□ 2.02
SNAP23-216ENST00000568331 NARFQ9UHQ1 456 aa27.68■■■□□ 2.02
SNAP23-216ENST00000568331 GPR162Q16538 588 aa27.67■■■□□ 2.02
SNAP23-216ENST00000568331 PELP1Q8IZL8 1130 aaKnown RBP27.67■■■□□ 2.02
SNAP23-216ENST00000568331 ZNF330Q9Y3S2 320 aaPredicted RBP27.67■■■□□ 2.02
SNAP23-216ENST00000568331 A1BGP04217 495 aa27.66■■■□□ 2.02
SNAP23-216ENST00000568331 EIF5P55010 431 aaKnown RBP27.66■■■□□ 2.02
SNAP23-216ENST00000568331 FKBP8Q14318 412 aa27.66■■■□□ 2.02
SNAP23-216ENST00000568331 USP16Q9Y5T5 823 aa27.66■■■□□ 2.02
SNAP23-216ENST00000568331 IL6STP40189 918 aaPredicted RBP27.65■■■□□ 2.02
SNAP23-216ENST00000568331 LAMB4A4D0S4 1761 aa27.64■■■□□ 2.02
SNAP23-216ENST00000568331 PRAMEF22A3QJZ6 481 aa27.63■■■□□ 2.01
SNAP23-216ENST00000568331 TSPYL4Q9UJ04 414 aa27.63■■■□□ 2.01
SNAP23-216ENST00000568331 KIF13BQ9NQT8 1826 aa27.61■■■□□ 2.01
SNAP23-216ENST00000568331 EIF4A1P60842 406 aaKnown RBP27.6■■■□□ 2.01
SNAP23-216ENST00000568331 BABAM1Q9NWV8 329 aa27.6■■■□□ 2.01
SNAP23-216ENST00000568331 CCDC184Q52MB2 194 aa27.59■■■□□ 2.01
SNAP23-216ENST00000568331 TM4SF1P30408 202 aa27.58■■■□□ 2.01
SNAP23-216ENST00000568331 MRS2Q9HD23 443 aa27.58■■■□□ 2.01
SNAP23-216ENST00000568331 TRIM35Q9UPQ4 493 aa27.58■■■□□ 2.01
SNAP23-216ENST00000568331 TBC1D2BQ9UPU7 963 aa27.58■■■□□ 2.01
SNAP23-216ENST00000568331 SCN7AQ01118 1682 aa27.58■■■□□ 2.01
SNAP23-216ENST00000568331 GIGYF1O75420 1035 aaPredicted RBP27.57■■■□□ 2
SNAP23-216ENST00000568331 PIP4K2AP48426 406 aaPredicted RBP27.57■■■□□ 2
SNAP23-216ENST00000568331 DDR1Q08345 913 aa27.57■■■□□ 2
SNAP23-216ENST00000568331 APAF1O14727 1248 aa27.56■■■□□ 2
SNAP23-216ENST00000568331 LAS1LQ9Y4W2 734 aaKnown RBP27.56■■■□□ 2
SNAP23-216ENST00000568331 CHD4Q14839 1912 aa27.56■■■□□ 2
SNAP23-216ENST00000568331 C10orf71Q711Q0 1435 aa27.56■■■□□ 2
SNAP23-216ENST00000568331 POLRMTO00411 1230 aaKnown RBP27.55■■■□□ 2
SNAP23-216ENST00000568331 TGFB2P61812 414 aa27.55■■■□□ 2
SNAP23-216ENST00000568331 DZIP3Q86Y13 1208 aaKnown RBP27.55■■■□□ 2
SNAP23-216ENST00000568331 BCL2L12Q9HB09 334 aa27.55■■■□□ 2
SNAP23-216ENST00000568331 N4BP2Q86UW6 1770 aaPredicted RBP27.55■■■□□ 2
SNAP23-216ENST00000568331 YY1P25490 414 aa27.54■■■□□ 2
SNAP23-216ENST00000568331 AFDNP55196 1824 aaKnown RBP27.54■■■□□ 2
SNAP23-216ENST00000568331 NFIXQ14938 502 aa27.54■■■□□ 2
SNAP23-216ENST00000568331 BCORQ6W2J9 1755 aa27.53■■■□□ 2
SNAP23-216ENST00000568331 GRIN3BO60391 1043 aa27.53■■■□□ 2
SNAP23-216ENST00000568331 NBPF26B4DH59 902 aa27.52■■■□□ 2
SNAP23-216ENST00000568331 NBPF10Q6P3W6 841 aaKnown RBP27.52■■■□□ 2
SNAP23-216ENST00000568331 BICDL1Q6ZP65 573 aa27.52■■■□□ 2
SNAP23-216ENST00000568331 NBPF15Q8N660 670 aa27.52■■■□□ 2
SNAP23-216ENST00000568331 CAMTA2O94983 1202 aa27.5■■□□□ 1.99
SNAP23-216ENST00000568331 SERPINB2P05120 415 aa27.5■■□□□ 1.99
SNAP23-216ENST00000568331 YBX3P16989 372 aaKnown RBP eCLIP27.5■■□□□ 1.992e-7■■■□□ 15.9
SNAP23-216ENST00000568331 PXDNLA1KZ92 1463 aa27.5■■□□□ 1.99
SNAP23-216ENST00000568331 KIAA1551Q9HCM1 1747 aa27.5■■□□□ 1.99
SNAP23-216ENST00000568331 CHL1O00533 1208 aa27.49■■□□□ 1.99
SNAP23-216ENST00000568331 CALD1Q05682 793 aaKnown RBP27.49■■□□□ 1.99
SNAP23-216ENST00000568331 TBC1D9BQ66K14 1250 aa27.49■■□□□ 1.99
SNAP23-216ENST00000568331 WWC3Q9ULE0 1092 aa27.49■■□□□ 1.99
SNAP23-216ENST00000568331 ZNF652Q9Y2D9 606 aa27.49■■□□□ 1.99
SNAP23-216ENST00000568331 NRXN2Q9P2S2 1712 aa27.48■■□□□ 1.99
SNAP23-216ENST00000568331 A0A0G2JLW4 131 aa27.48■■□□□ 1.99
SNAP23-216ENST00000568331 NGEFQ8N5V2 710 aa27.47■■□□□ 1.99
SNAP23-216ENST00000568331 SETDB2Q96T68 719 aa27.47■■□□□ 1.99
SNAP23-216ENST00000568331 MYL6BP14649 208 aa27.46■■□□□ 1.99
SNAP23-216ENST00000568331 EIF2S2P20042 333 aaKnown RBP27.46■■□□□ 1.99
SNAP23-216ENST00000568331 CFAP44Q96MT7 982 aa27.46■■□□□ 1.99
SNAP23-216ENST00000568331 ERBB4Q15303 1308 aa27.45■■□□□ 1.99
SNAP23-216ENST00000568331 DPEP1P16444 411 aa27.45■■□□□ 1.98
SNAP23-216ENST00000568331 CLEC4GQ6UXB4 293 aa27.45■■□□□ 1.98
SNAP23-216ENST00000568331 CARMIL3Q8ND23 1372 aa27.45■■□□□ 1.98
SNAP23-216ENST00000568331 NPHP1O15259 732 aa27.43■■□□□ 1.98
SNAP23-216ENST00000568331 BRCA1P38398 1863 aaKnown RBP27.42■■□□□ 1.98
SNAP23-216ENST00000568331 GNAI1P63096 354 aa27.42■■□□□ 1.98
SNAP23-216ENST00000568331 KIF6Q6ZMV9 814 aa27.42■■□□□ 1.98
SNAP23-216ENST00000568331 RGL2O15211 777 aa27.41■■□□□ 1.98
SNAP23-216ENST00000568331 IFT57Q9NWB7 429 aa27.41■■□□□ 1.98
SNAP23-216ENST00000568331 BCS1LQ9Y276 419 aa27.41■■□□□ 1.98
SNAP23-216ENST00000568331 GOLGB1Q14789 3259 aaKnown RBP27.4■■□□□ 1.98
SNAP23-216ENST00000568331 PIM2Q9P1W9 311 aa27.4■■□□□ 1.98
SNAP23-216ENST00000568331 UTRNP46939 3433 aa27.39■■□□□ 1.98
SNAP23-216ENST00000568331 NECTIN2Q92692 538 aa27.39■■□□□ 1.98
SNAP23-216ENST00000568331 MBIPQ9NS73 344 aa27.39■■□□□ 1.98
SNAP23-216ENST00000568331 NUP98P52948 1817 aa27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms