RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 USPL1Q5W0Q7 1092 aa9.51□□□□□ -0.89
SMPD3-210ENST00000567811 NARFQ9UHQ1 456 aa9.51□□□□□ -0.89
SMPD3-210ENST00000567811 MRC1P22897 1456 aa9.51□□□□□ -0.89
SMPD3-210ENST00000567811 HEG1Q9ULI3 1381 aa9.5□□□□□ -0.89
SMPD3-210ENST00000567811 A1BGP04217 495 aa9.5□□□□□ -0.89
SMPD3-210ENST00000567811 SNRPA1P09661 255 aaKnown RBP9.5□□□□□ -0.89
SMPD3-210ENST00000567811 EIF5P55010 431 aaKnown RBP9.5□□□□□ -0.89
SMPD3-210ENST00000567811 NFE2L2Q16236 605 aa9.5□□□□□ -0.89
SMPD3-210ENST00000567811 NPM2Q86SE8 214 aaKnown RBP9.5□□□□□ -0.89
SMPD3-210ENST00000567811 PNISRQ8TF01 805 aaKnown RBP9.5□□□□□ -0.89
SMPD3-210ENST00000567811 MIS18AQ9NYP9 233 aa9.5□□□□□ -0.89
SMPD3-210ENST00000567811 ZBTB1Q9Y2K1 713 aa9.5□□□□□ -0.89
SMPD3-210ENST00000567811 USP16Q9Y5T5 823 aa9.5□□□□□ -0.89
SMPD3-210ENST00000567811 SOS1Q07889 1333 aaPredicted RBP9.5□□□□□ -0.89
SMPD3-210ENST00000567811 MYBBP1AQ9BQG0 1328 aaKnown RBP9.5□□□□□ -0.89
SMPD3-210ENST00000567811 USP42Q9H9J4 1324 aaKnown RBP9.5□□□□□ -0.89
SMPD3-210ENST00000567811 UBR2Q8IWV8 1755 aa9.5□□□□□ -0.89
SMPD3-210ENST00000567811 A0A0G2JLW4 131 aa9.49□□□□□ -0.89
SMPD3-210ENST00000567811 YBX3P16989 372 aaKnown RBP eCLIP9.49□□□□□ -0.89
SMPD3-210ENST00000567811 RIPK4P57078 832 aa9.49□□□□□ -0.89
SMPD3-210ENST00000567811 PRKRIP1Q9H875 184 aaPredicted RBP9.49□□□□□ -0.89
SMPD3-210ENST00000567811 KCPQ6ZWJ8 1503 aa9.49□□□□□ -0.89
SMPD3-210ENST00000567811 MAPK8IP3Q9UPT6 1336 aa9.49□□□□□ -0.89
SMPD3-210ENST00000567811 CICQ96RK0 1608 aaPredicted RBP9.49□□□□□ -0.89
SMPD3-210ENST00000567811 IL6STP40189 918 aaPredicted RBP9.48□□□□□ -0.89
SMPD3-210ENST00000567811 TBC1D2BQ9UPU7 963 aa9.48□□□□□ -0.89
SMPD3-210ENST00000567811 C4AP0C0L4 1744 aa9.48□□□□□ -0.89
SMPD3-210ENST00000567811 N4BP2Q86UW6 1770 aaPredicted RBP9.47□□□□□ -0.89
SMPD3-210ENST00000567811 KIF13BQ9NQT8 1826 aa9.47□□□□□ -0.89
SMPD3-210ENST00000567811 SERPINB2P05120 415 aa9.47□□□□□ -0.89
SMPD3-210ENST00000567811 TMPOP42166 694 aaKnown RBP9.47□□□□□ -0.89
SMPD3-210ENST00000567811 NFIXQ14938 502 aa9.47□□□□□ -0.89
SMPD3-210ENST00000567811 WDR43Q15061 677 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMPD3-210ENST00000567811 BCL2L12Q9HB09 334 aa9.47□□□□□ -0.89
SMPD3-210ENST00000567811 WWC3Q9ULE0 1092 aa9.47□□□□□ -0.89
SMPD3-210ENST00000567811 ADAMTS8Q9UP79 889 aa9.47□□□□□ -0.89
SMPD3-210ENST00000567811 ZNF330Q9Y3S2 320 aaPredicted RBP9.47□□□□□ -0.89
SMPD3-210ENST00000567811 PRAMEF22A3QJZ6 481 aa9.46□□□□□ -0.9
SMPD3-210ENST00000567811 ZNF316A6NFI3 1004 aaPredicted RBP9.46□□□□□ -0.9
SMPD3-210ENST00000567811 POLRMTO00411 1230 aaKnown RBP9.46□□□□□ -0.9
SMPD3-210ENST00000567811 DPEP1P16444 411 aa9.46□□□□□ -0.9
SMPD3-210ENST00000567811 KCNA3P22001 575 aa9.46□□□□□ -0.9
SMPD3-210ENST00000567811 DDR1Q08345 913 aa9.46□□□□□ -0.9
SMPD3-210ENST00000567811 NEUROD2Q15784 382 aa9.46□□□□□ -0.9
SMPD3-210ENST00000567811 BICDL1Q6ZP65 573 aa9.46□□□□□ -0.9
SMPD3-210ENST00000567811 RUNDC1Q96C34 613 aa9.46□□□□□ -0.9
SMPD3-210ENST00000567811 PIM2Q9P1W9 311 aa9.46□□□□□ -0.9
SMPD3-210ENST00000567811 AFDNP55196 1824 aaKnown RBP9.46□□□□□ -0.9
SMPD3-210ENST00000567811 COL15A1P39059 1388 aa9.46□□□□□ -0.9
SMPD3-210ENST00000567811 GIGYF1O75420 1035 aaPredicted RBP9.45□□□□□ -0.9
SMPD3-210ENST00000567811 EIF4A1P60842 406 aaKnown RBP9.45□□□□□ -0.9
SMPD3-210ENST00000567811 CCDC146Q8IYE0 955 aa9.45□□□□□ -0.9
SMPD3-210ENST00000567811 ZNF784Q8NCA9 323 aaPredicted RBP9.45□□□□□ -0.9
SMPD3-210ENST00000567811 THUMPD2Q9BTF0 503 aaKnown RBP9.45□□□□□ -0.9
SMPD3-210ENST00000567811 BCS1LQ9Y276 419 aa9.45□□□□□ -0.9
SMPD3-210ENST00000567811 PIP4K2AP48426 406 aaPredicted RBP9.44□□□□□ -0.9
SMPD3-210ENST00000567811 LMOD3Q0VAK6 560 aa9.44□□□□□ -0.9
SMPD3-210ENST00000567811 TBC1D9BQ66K14 1250 aa9.44□□□□□ -0.9
SMPD3-210ENST00000567811 CLEC4GQ6UXB4 293 aa9.44□□□□□ -0.9
SMPD3-210ENST00000567811 ARHGAP27Q6ZUM4 889 aa9.44□□□□□ -0.9
SMPD3-210ENST00000567811 DZIP3Q86Y13 1208 aaKnown RBP9.44□□□□□ -0.9
SMPD3-210ENST00000567811 SETDB2Q96T68 719 aa9.44□□□□□ -0.9
SMPD3-210ENST00000567811 BABAM1Q9NWV8 329 aa9.44□□□□□ -0.9
SMPD3-210ENST00000567811 NBPF26B4DH59 902 aa9.43□□□□□ -0.9
SMPD3-210ENST00000567811 CAMTA2O94983 1202 aa9.43□□□□□ -0.9
SMPD3-210ENST00000567811 NBPF10Q6P3W6 841 aaKnown RBP9.43□□□□□ -0.9
SMPD3-210ENST00000567811 NBPF15Q8N660 670 aa9.43□□□□□ -0.9
SMPD3-210ENST00000567811 TSPYL4Q9UJ04 414 aa9.43□□□□□ -0.9
SMPD3-210ENST00000567811 RRP7AQ9Y3A4 280 aaKnown RBP9.43□□□□□ -0.9
SMPD3-210ENST00000567811 H0YIN7 160 aa9.42□□□□□ -0.9
SMPD3-210ENST00000567811 CHRNA5P30532 468 aa9.42□□□□□ -0.9
SMPD3-210ENST00000567811 DALRD3Q5D0E6 543 aaKnown RBP9.42□□□□□ -0.9
SMPD3-210ENST00000567811 NGEFQ8N5V2 710 aa9.42□□□□□ -0.9
SMPD3-210ENST00000567811 BRCA1P38398 1863 aaKnown RBP9.42□□□□□ -0.9
SMPD3-210ENST00000567811 PXDNLA1KZ92 1463 aa9.41□□□□□ -0.9
SMPD3-210ENST00000567811 C10orf71Q711Q0 1435 aa9.41□□□□□ -0.9
SMPD3-210ENST00000567811 CCDC88AQ3V6T2 1871 aa9.41□□□□□ -0.9
SMPD3-210ENST00000567811 NUP98P52948 1817 aa9.41□□□□□ -0.9
SMPD3-210ENST00000567811 CHL1O00533 1208 aa9.41□□□□□ -0.9
SMPD3-210ENST00000567811 EIF2S2P20042 333 aaKnown RBP9.41□□□□□ -0.9
SMPD3-210ENST00000567811 PDE6BP35913 854 aa9.41□□□□□ -0.9
SMPD3-210ENST00000567811 BRIP1Q9BX63 1249 aa9.41□□□□□ -0.9
SMPD3-210ENST00000567811 TRIM35Q9UPQ4 493 aa9.41□□□□□ -0.9
SMPD3-210ENST00000567811 PDZRN3Q9UPQ7 1066 aa9.41□□□□□ -0.9
SMPD3-210ENST00000567811 ZNF652Q9Y2D9 606 aa9.41□□□□□ -0.9
SMPD3-210ENST00000567811 LAS1LQ9Y4W2 734 aaKnown RBP9.41□□□□□ -0.9
SMPD3-210ENST00000567811 ARFGEF1Q9Y6D6 1849 aa9.4□□□□□ -0.9
SMPD3-210ENST00000567811 KDM3BQ7LBC6 1761 aa9.4□□□□□ -0.9
SMPD3-210ENST00000567811 KIAA1551Q9HCM1 1747 aa9.4□□□□□ -0.9
SMPD3-210ENST00000567811 ERVV-1B6SEH8 477 aa9.4□□□□□ -0.9
SMPD3-210ENST00000567811 APAF1O14727 1248 aa9.4□□□□□ -0.9
SMPD3-210ENST00000567811 RGL2O15211 777 aa9.4□□□□□ -0.9
SMPD3-210ENST00000567811 NPHP1O15259 732 aa9.4□□□□□ -0.9
SMPD3-210ENST00000567811 TPTE2Q6XPS3 522 aa9.4□□□□□ -0.9
SMPD3-210ENST00000567811 C2CD5Q86YS7 1000 aa9.4□□□□□ -0.9
SMPD3-210ENST00000567811 TTLL6Q8N841 843 aa9.4□□□□□ -0.9
SMPD3-210ENST00000567811 SBF1O95248 1867 aa9.4□□□□□ -0.91
SMPD3-210ENST00000567811 NRXN2Q9P2S2 1712 aa9.39□□□□□ -0.91
SMPD3-210ENST00000567811 ANP32CO43423 234 aa9.39□□□□□ -0.91
SMPD3-210ENST00000567811 MYL6BP14649 208 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms