RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	VSIG10	Q8N0Z9	540 aa		12.03	□□□□□ -0.48
FANCA-223	ENST00000567284	SSH1	Q8WYL5	1049 aa		12.03	□□□□□ -0.48
FANCA-223	ENST00000567284	CHPF2	Q9P2E5	772 aa		12.03	□□□□□ -0.48
FANCA-223	ENST00000567284	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.03	□□□□□ -0.48
FANCA-223	ENST00000567284	RGPD3	A6NKT7	1758 aa	Predicted RBP	12.02	□□□□□ -0.48
FANCA-223	ENST00000567284	RGPD4	Q7Z3J3	1758 aa		12.02	□□□□□ -0.48
FANCA-223	ENST00000567284	STARD3NL	O95772	234 aa		12.02	□□□□□ -0.49
FANCA-223	ENST00000567284	SLC4A2	P04920	1241 aa		12.02	□□□□□ -0.49
FANCA-223	ENST00000567284	CANX	P27824	592 aa	Known RBP	12.02	□□□□□ -0.49
FANCA-223	ENST00000567284	LINC00116	Q8NCU8	138 aa		12.02	□□□□□ -0.49
FANCA-223	ENST00000567284	FRAT1	Q92837	279 aa	Predicted RBP	12.02	□□□□□ -0.49
FANCA-223	ENST00000567284	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.02	□□□□□ -0.49
FANCA-223	ENST00000567284	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.02	□□□□□ -0.49
FANCA-223	ENST00000567284	SOS1	Q07889	1333 aa	Predicted RBP	12.02	□□□□□ -0.49
FANCA-223	ENST00000567284	CIC	Q96RK0	1608 aa	Predicted RBP	12.01	□□□□□ -0.49
FANCA-223	ENST00000567284	C4B	P0C0L5	1744 aa		12.01	□□□□□ -0.49
FANCA-223	ENST00000567284	CYP19A1	P11511	503 aa	Predicted RBP	12.01	□□□□□ -0.49
FANCA-223	ENST00000567284	BAG6	P46379	1132 aa		12.01	□□□□□ -0.49
FANCA-223	ENST00000567284	EZH2	Q15910	746 aa	Known RBP	12.01	□□□□□ -0.49
FANCA-223	ENST00000567284	TXNRD1	Q16881	649 aa		12.01	□□□□□ -0.49
FANCA-223	ENST00000567284	PROSER3	Q2NL68	480 aa		12.01	□□□□□ -0.49
FANCA-223	ENST00000567284	DEFB132	Q7Z7B7	95 aa		12.01	□□□□□ -0.49
FANCA-223	ENST00000567284	MRPL50	Q8N5N7	158 aa	Known RBP	12.01	□□□□□ -0.49
FANCA-223	ENST00000567284	ARX	Q96QS3	562 aa		12.01	□□□□□ -0.49
FANCA-223	ENST00000567284	TUBGCP6	Q96RT7	1819 aa		12.01	□□□□□ -0.49
FANCA-223	ENST00000567284	PLSCR1	O15162	318 aa		12	□□□□□ -0.49
FANCA-223	ENST00000567284	PLIN1	O60240	522 aa		12	□□□□□ -0.49
FANCA-223	ENST00000567284	CRKL	P46109	303 aa	Known RBP	12	□□□□□ -0.49
FANCA-223	ENST00000567284	AIMP1	Q12904	312 aa	Known RBP	12	□□□□□ -0.49
FANCA-223	ENST00000567284	ALDH1L2	Q3SY69	923 aa		12	□□□□□ -0.49
FANCA-223	ENST00000567284	G2E3	Q7L622	706 aa		12	□□□□□ -0.49
FANCA-223	ENST00000567284	LRRC4B	Q9NT99	713 aa		12	□□□□□ -0.49
FANCA-223	ENST00000567284	RREB1	Q92766	1687 aa		12	□□□□□ -0.49
FANCA-223	ENST00000567284	UBR3	Q6ZT12	1888 aa		12	□□□□□ -0.49
FANCA-223	ENST00000567284	PROM2	Q8N271	834 aa		11.99	□□□□□ -0.49
FANCA-223	ENST00000567284	ZNF428	Q96B54	188 aa		11.99	□□□□□ -0.49
FANCA-223	ENST00000567284	CHMP4A	Q9BY43	222 aa		11.99	□□□□□ -0.49
FANCA-223	ENST00000567284	PHAX	Q9H814	394 aa	Known RBP	11.99	□□□□□ -0.49
FANCA-223	ENST00000567284	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
FANCA-223	ENST00000567284	CCDC87	Q9NVE4	849 aa		11.99	□□□□□ -0.49
FANCA-223	ENST00000567284	DBF4	Q9UBU7	674 aa	Predicted RBP	11.99	□□□□□ -0.49
FANCA-223	ENST00000567284	NOB1	Q9ULX3	412 aa	Known RBP	11.99	□□□□□ -0.49
FANCA-223	ENST00000567284	ZBTB1	Q9Y2K1	713 aa		11.99	□□□□□ -0.49
FANCA-223	ENST00000567284	NUP188	Q5SRE5	1749 aa		11.99	□□□□□ -0.49
FANCA-223	ENST00000567284	AFDN	P55196	1824 aa	Known RBP	11.99	□□□□□ -0.49
FANCA-223	ENST00000567284	NUP98	P52948	1817 aa		11.98	□□□□□ -0.49
FANCA-223	ENST00000567284	ARFGEF2	Q9Y6D5	1785 aa		11.98	□□□□□ -0.49
FANCA-223	ENST00000567284	NBPF26	B4DH59	902 aa		11.98	□□□□□ -0.49
FANCA-223	ENST00000567284	SLC27A3	Q5K4L6	730 aa		11.98	□□□□□ -0.49
FANCA-223	ENST00000567284	NBPF14	Q5TI25	921 aa		11.98	□□□□□ -0.49
FANCA-223	ENST00000567284	NBPF10	Q6P3W6	841 aa	Known RBP	11.98	□□□□□ -0.49
FANCA-223	ENST00000567284	INTS5	Q6P9B9	1019 aa	Known RBP	11.98	□□□□□ -0.49
FANCA-223	ENST00000567284	SMIM5	Q71RC9	77 aa		11.98	□□□□□ -0.49
FANCA-223	ENST00000567284	NBPF15	Q8N660	670 aa		11.98	□□□□□ -0.49
FANCA-223	ENST00000567284	AK7	Q96M32	723 aa		11.98	□□□□□ -0.49
FANCA-223	ENST00000567284	EP400	Q96L91	3159 aa		11.98	□□□□□ -0.49
FANCA-223	ENST00000567284	PDIA6	Q15084	440 aa		11.97	□□□□□ -0.49
FANCA-223	ENST00000567284	NPM2	Q86SE8	214 aa	Known RBP	11.97	□□□□□ -0.49
FANCA-223	ENST00000567284	XAGE3	Q8WTP9	111 aa		11.97	□□□□□ -0.49
FANCA-223	ENST00000567284	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
FANCA-223	ENST00000567284	HYPK	Q9NX55	129 aa		11.97	□□□□□ -0.49
FANCA-223	ENST00000567284	TNN	Q9UQP3	1299 aa		11.97	□□□□□ -0.49
FANCA-223	ENST00000567284	ERBB4	Q15303	1308 aa		11.96	□□□□□ -0.49
FANCA-223	ENST00000567284	GNPAT	O15228	680 aa		11.96	□□□□□ -0.49
FANCA-223	ENST00000567284	PHF14	O94880	888 aa		11.96	□□□□□ -0.49
FANCA-223	ENST00000567284	RRP1	P56182	461 aa	Known RBP	11.96	□□□□□ -0.49
FANCA-223	ENST00000567284	IRX6	P78412	446 aa	Predicted RBP	11.96	□□□□□ -0.49
FANCA-223	ENST00000567284	FLII	Q13045	1269 aa		11.96	□□□□□ -0.49
FANCA-223	ENST00000567284	FKBP5	Q13451	457 aa	Predicted RBP	11.96	□□□□□ -0.49
FANCA-223	ENST00000567284	COPS6	Q7L5N1	327 aa		11.96	□□□□□ -0.49
FANCA-223	ENST00000567284	CCDC125	Q86Z20	511 aa		11.96	□□□□□ -0.49
FANCA-223	ENST00000567284	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.96	□□□□□ -0.49
FANCA-223	ENST00000567284	CAMKK2	Q96RR4	588 aa		11.96	□□□□□ -0.49
FANCA-223	ENST00000567284	C4A	P0C0L4	1744 aa		11.96	□□□□□ -0.49
FANCA-223	ENST00000567284	KIF16B	Q96L93	1317 aa		11.95	□□□□□ -0.5
FANCA-223	ENST00000567284	CNTNAP4	Q9C0A0	1308 aa		11.95	□□□□□ -0.5
FANCA-223	ENST00000567284	ZKSCAN2	Q63HK3	967 aa		11.95	□□□□□ -0.5
FANCA-223	ENST00000567284	TTLL7	Q6ZT98	887 aa		11.95	□□□□□ -0.5
FANCA-223	ENST00000567284	CLUAP1	Q96AJ1	413 aa		11.95	□□□□□ -0.5
FANCA-223	ENST00000567284		F6X3S4	739 aa		11.94	□□□□□ -0.5
FANCA-223	ENST00000567284	IPO8	O15397	1037 aa	Known RBP	11.94	□□□□□ -0.5
FANCA-223	ENST00000567284	RC3H1	Q5TC82	1133 aa	Known RBP	11.94	□□□□□ -0.5
FANCA-223	ENST00000567284	SLC4A10	Q6U841	1118 aa		11.94	□□□□□ -0.5
FANCA-223	ENST00000567284	KIF6	Q6ZMV9	814 aa		11.94	□□□□□ -0.5
FANCA-223	ENST00000567284	RIC3	Q7Z5B4	369 aa		11.94	□□□□□ -0.5
FANCA-223	ENST00000567284	ZBTB3	Q9H5J0	574 aa		11.94	□□□□□ -0.5
FANCA-223	ENST00000567284	TBC1D2B	Q9UPU7	963 aa		11.94	□□□□□ -0.5
FANCA-223	ENST00000567284	RTCB	Q9Y3I0	505 aa	Known RBP	11.94	□□□□□ -0.5
FANCA-223	ENST00000567284	ANKRD36C	Q5JPF3	1778 aa		11.94	□□□□□ -0.5
FANCA-223	ENST00000567284	BCOR	Q6W2J9	1755 aa		11.94	□□□□□ -0.5
FANCA-223	ENST00000567284	MSH5	O43196	834 aa		11.93	□□□□□ -0.5
FANCA-223	ENST00000567284	RPS6KA4	O75676	772 aa		11.93	□□□□□ -0.5
FANCA-223	ENST00000567284	DDX58	O95786	925 aa	Known RBP	11.93	□□□□□ -0.5
FANCA-223	ENST00000567284	IL6ST	P40189	918 aa	Predicted RBP	11.93	□□□□□ -0.5
FANCA-223	ENST00000567284	ZNF827	Q17R98	1081 aa		11.93	□□□□□ -0.5
FANCA-223	ENST00000567284	ATF7IP	Q6VMQ6	1270 aa		11.93	□□□□□ -0.5
FANCA-223	ENST00000567284	DZIP3	Q86Y13	1208 aa	Known RBP	11.93	□□□□□ -0.5
FANCA-223	ENST00000567284	FTSJ3	Q8IY81	847 aa	Known RBP	11.93	□□□□□ -0.5
FANCA-223	ENST00000567284	TFCP2L1	Q9NZI6	479 aa		11.93	□□□□□ -0.5
FANCA-223	ENST00000567284	COL15A1	P39059	1388 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms