RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 HSP90AB2PQ58FF8 381 aa26.15■■□□□ 1.78
SPSB3-208ENST00000566339 CHMP4AQ9BY43 222 aa26.15■■□□□ 1.78
SPSB3-208ENST00000566339 MAP3K19Q56UN5 1328 aa26.14■■□□□ 1.78
SPSB3-208ENST00000566339 TOM1O60784 492 aa26.14■■□□□ 1.78
SPSB3-208ENST00000566339 G2E3Q7L622 706 aa26.14■■□□□ 1.78
SPSB3-208ENST00000566339 FLIIQ13045 1269 aa26.13■■□□□ 1.77
SPSB3-208ENST00000566339 MTHFSDQ2M296 383 aaKnown RBP26.13■■□□□ 1.77
SPSB3-208ENST00000566339 SLC4A10Q6U841 1118 aa26.13■■□□□ 1.77
SPSB3-208ENST00000566339 KCNA6P17658 529 aa26.12■■□□□ 1.77
SPSB3-208ENST00000566339 HSPA4P34932 840 aa26.12■■□□□ 1.77
SPSB3-208ENST00000566339 TBX22Q9Y458 520 aa26.12■■□□□ 1.77
SPSB3-208ENST00000566339 ANKARQ7Z5J8 1434 aa26.12■■□□□ 1.77
SPSB3-208ENST00000566339 DYNC1I1O14576 645 aa26.12■■□□□ 1.77
SPSB3-208ENST00000566339 EXOC6BQ9Y2D4 811 aa26.11■■□□□ 1.77
SPSB3-208ENST00000566339 RBM33Q96EV2 1170 aaKnown RBP26.1■■□□□ 1.77
SPSB3-208ENST00000566339 ANO2Q9NQ90 1003 aa26.1■■□□□ 1.77
SPSB3-208ENST00000566339 SSH3Q8TE77 659 aa26.1■■□□□ 1.77
SPSB3-208ENST00000566339 F6X3S4 739 aa26.09■■□□□ 1.77
SPSB3-208ENST00000566339 SASS6Q6UVJ0 657 aa26.09■■□□□ 1.77
SPSB3-208ENST00000566339 PDIA4P13667 645 aaKnown RBP26.08■■□□□ 1.77
SPSB3-208ENST00000566339 PALD1Q9ULE6 856 aa26.07■■□□□ 1.76
SPSB3-208ENST00000566339 NSFL1CQ9UNZ2 370 aaKnown RBP26.07■■□□□ 1.76
SPSB3-208ENST00000566339 NWD1Q149M9 1564 aa26.07■■□□□ 1.76
SPSB3-208ENST00000566339 TRIM6-TRIM34B2RNG4 842 aa26.07■■□□□ 1.76
SPSB3-208ENST00000566339 PROSER2Q86WR7 435 aaPredicted RBP26.07■■□□□ 1.76
SPSB3-208ENST00000566339 R3HCC1Q9Y3T6 440 aaKnown RBP26.07■■□□□ 1.76
SPSB3-208ENST00000566339 XIRP1Q702N8 1843 aaKnown RBP26.07■■□□□ 1.76
SPSB3-208ENST00000566339 FKBP5Q13451 457 aaPredicted RBP26.06■■□□□ 1.76
SPSB3-208ENST00000566339 ATP6V1DQ9Y5K8 247 aa26.06■■□□□ 1.76
SPSB3-208ENST00000566339 RILPL2Q969X0 211 aa26.05■■□□□ 1.76
SPSB3-208ENST00000566339 AMOTL2Q9Y2J4 779 aa26.05■■□□□ 1.76
SPSB3-208ENST00000566339 RAD50Q92878 1312 aa26.05■■□□□ 1.76
SPSB3-208ENST00000566339 TMEM94Q12767 1356 aa26.05■■□□□ 1.76
SPSB3-208ENST00000566339 PNMA6EA0A0J9YXQ4 647 aa26.05■■□□□ 1.76
SPSB3-208ENST00000566339 GNAT3A8MTJ3 354 aa26.05■■□□□ 1.76
SPSB3-208ENST00000566339 POLA2Q14181 598 aa26.05■■□□□ 1.76
SPSB3-208ENST00000566339 CCDC183Q5T5S1 534 aa26.05■■□□□ 1.76
SPSB3-208ENST00000566339 RPAP1Q9BWH6 1393 aaPredicted RBP26.04■■□□□ 1.76
SPSB3-208ENST00000566339 CRYBG1Q9Y4K1 1723 aa26.04■■□□□ 1.76
SPSB3-208ENST00000566339 KIAA2012Q0VF49 1180 aa26.04■■□□□ 1.76
SPSB3-208ENST00000566339 HSP90AB4PQ58FF6 505 aa26.04■■□□□ 1.76
SPSB3-208ENST00000566339 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.04■■□□□ 1.76
SPSB3-208ENST00000566339 USP42Q9H9J4 1324 aaKnown RBP26.04■■□□□ 1.76
SPSB3-208ENST00000566339 MAP3K5Q99683 1374 aa26.04■■□□□ 1.76
SPSB3-208ENST00000566339 CHD2O14647 1828 aaKnown RBP26.04■■□□□ 1.76
SPSB3-208ENST00000566339 UBTFL1P0CB47 393 aaPredicted RBP26.03■■□□□ 1.76
SPSB3-208ENST00000566339 SGSM2O43147 1006 aa26.02■■□□□ 1.76
SPSB3-208ENST00000566339 EYA1Q99502 592 aa26.02■■□□□ 1.76
SPSB3-208ENST00000566339 HOXB7P09629 217 aa26.01■■□□□ 1.75
SPSB3-208ENST00000566339 XPCQ01831 940 aaPredicted RBP26.01■■□□□ 1.75
SPSB3-208ENST00000566339 VSIG10Q8N0Z9 540 aa26.01■■□□□ 1.75
SPSB3-208ENST00000566339 LRRFIP2Q9Y608 721 aaKnown RBP26.01■■□□□ 1.75
SPSB3-208ENST00000566339 UQCRHLA0A096LP55 91 aa26■■□□□ 1.75
SPSB3-208ENST00000566339 UQCRHP07919 91 aa26■■□□□ 1.75
SPSB3-208ENST00000566339 USP48Q86UV5 1035 aa26■■□□□ 1.75
SPSB3-208ENST00000566339 KIF1BPQ96EK5 621 aa26■■□□□ 1.75
SPSB3-208ENST00000566339 TTC14Q96N46 770 aa26■■□□□ 1.75
SPSB3-208ENST00000566339 USP44Q9H0E7 712 aa26■■□□□ 1.75
SPSB3-208ENST00000566339 MIS18AQ9NYP9 233 aa26■■□□□ 1.75
SPSB3-208ENST00000566339 FOXO3O43524 673 aa26■■□□□ 1.75
SPSB3-208ENST00000566339 UBE2HP62256 183 aa26■■□□□ 1.75
SPSB3-208ENST00000566339 TAF7Q15545 349 aaPredicted RBP26■■□□□ 1.75
SPSB3-208ENST00000566339 CNTROBQ8N137 903 aa26■■□□□ 1.75
SPSB3-208ENST00000566339 PTMAP06454 111 aaKnown RBP25.99■■□□□ 1.75
SPSB3-208ENST00000566339 PRIMPOLQ96LW4 560 aa25.99■■□□□ 1.75
SPSB3-208ENST00000566339 TTC41PQ6P2S7 1318 aa25.98■■□□□ 1.75
SPSB3-208ENST00000566339 NUTM2FA1L443 756 aa25.98■■□□□ 1.75
SPSB3-208ENST00000566339 ZSCAN22P10073 491 aaPredicted RBP25.98■■□□□ 1.75
SPSB3-208ENST00000566339 AMPHP49418 695 aa25.98■■□□□ 1.75
SPSB3-208ENST00000566339 LIMCH1Q9UPQ0 1083 aa25.98■■□□□ 1.75
SPSB3-208ENST00000566339 TPM3P06753 285 aa25.97■■□□□ 1.75
SPSB3-208ENST00000566339 HSPA1LP34931 641 aa25.97■■□□□ 1.75
SPSB3-208ENST00000566339 HMGN5P82970 282 aaKnown RBP25.97■■□□□ 1.75
SPSB3-208ENST00000566339 PI4K2BQ8TCG2 481 aa25.97■■□□□ 1.75
SPSB3-208ENST00000566339 ZSCAN31Q96LW9 406 aaPredicted RBP25.97■■□□□ 1.75
SPSB3-208ENST00000566339 TM6SF1Q9BZW5 370 aa25.96■■□□□ 1.75
SPSB3-208ENST00000566339 RHPN1Q8TCX5 695 aa25.95■■□□□ 1.75
SPSB3-208ENST00000566339 RUFY2Q8WXA3 655 aa25.95■■□□□ 1.75
SPSB3-208ENST00000566339 PIBF1Q8WXW3 757 aa25.95■■□□□ 1.75
SPSB3-208ENST00000566339 LSG1Q9H089 658 aaKnown RBP25.95■■□□□ 1.75
SPSB3-208ENST00000566339 UNC5CLQ8IV45 518 aa25.95■■□□□ 1.74
SPSB3-208ENST00000566339 KCNB2Q92953 911 aa25.95■■□□□ 1.74
SPSB3-208ENST00000566339 HDAC5Q9UQL6 1122 aa25.95■■□□□ 1.74
SPSB3-208ENST00000566339 SNX14Q9Y5W7 946 aa25.95■■□□□ 1.74
SPSB3-208ENST00000566339 FOXD4L5Q5VV16 416 aaPredicted RBP25.94■■□□□ 1.74
SPSB3-208ENST00000566339 TSHZ3Q63HK5 1081 aa25.94■■□□□ 1.74
SPSB3-208ENST00000566339 RNF214Q8ND24 703 aa25.94■■□□□ 1.74
SPSB3-208ENST00000566339 FOXD4L4Q8WXT5 416 aaPredicted RBP25.94■■□□□ 1.74
SPSB3-208ENST00000566339 SH2B1Q9NRF2 756 aaPredicted RBP25.94■■□□□ 1.74
SPSB3-208ENST00000566339 UPF3BQ9BZI7 483 aaKnown RBP25.93■■□□□ 1.74
SPSB3-208ENST00000566339 ZMYND15Q9H091 742 aa25.93■■□□□ 1.74
SPSB3-208ENST00000566339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.93■■□□□ 1.74
SPSB3-208ENST00000566339 MED1Q15648 1581 aaPredicted RBP25.93■■□□□ 1.74
SPSB3-208ENST00000566339 STX6O43752 255 aa25.92■■□□□ 1.74
SPSB3-208ENST00000566339 NGDNQ8NEJ9 315 aaKnown RBP25.92■■□□□ 1.74
SPSB3-208ENST00000566339 PHRF1Q9P1Y6 1649 aaKnown RBP25.92■■□□□ 1.74
SPSB3-208ENST00000566339 LTN1O94822 1766 aa25.92■■□□□ 1.74
SPSB3-208ENST00000566339 GLRX3O76003 335 aaKnown RBP25.92■■□□□ 1.74
SPSB3-208ENST00000566339 CHAMP1Q96JM3 812 aa25.92■■□□□ 1.74
SPSB3-208ENST00000566339 GADD45BO75293 160 aaPredicted RBP25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms