RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 KCNA3P22001 575 aa20.28■□□□□ 0.84
CMTM3-212ENST00000566121 C1QTNF8P60827 252 aa20.28■□□□□ 0.84
CMTM3-212ENST00000566121 ZNF496Q96IT1 587 aaPredicted RBP20.28■□□□□ 0.84
CMTM3-212ENST00000566121 ZBTB1Q9Y2K1 713 aa20.28■□□□□ 0.84
CMTM3-212ENST00000566121 U2AF1L5P0DN76 240 aaPredicted RBP20.27■□□□□ 0.84
CMTM3-212ENST00000566121 U2AF1Q01081 240 aaKnown RBP eCLIP20.27■□□□□ 0.84
CMTM3-212ENST00000566121 DDR1Q08345 913 aa20.27■□□□□ 0.84
CMTM3-212ENST00000566121 FMNL2Q96PY5 1086 aa20.27■□□□□ 0.84
CMTM3-212ENST00000566121 SIPA1L3O60292 1781 aaPredicted RBP20.26■□□□□ 0.83
CMTM3-212ENST00000566121 COL15A1P39059 1388 aa20.26■□□□□ 0.83
CMTM3-212ENST00000566121 IL6STP40189 918 aaPredicted RBP20.26■□□□□ 0.83
CMTM3-212ENST00000566121 USPL1Q5W0Q7 1092 aa20.26■□□□□ 0.83
CMTM3-212ENST00000566121 A0A0G2JLW4 131 aa20.25■□□□□ 0.83
CMTM3-212ENST00000566121 RGL2O15211 777 aa20.25■□□□□ 0.83
CMTM3-212ENST00000566121 DPEP1P16444 411 aa20.25■□□□□ 0.83
CMTM3-212ENST00000566121 GIGYF1O75420 1035 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-212ENST00000566121 BCL2L12Q9HB09 334 aa20.24■□□□□ 0.83
CMTM3-212ENST00000566121 PIM2Q9P1W9 311 aa20.24■□□□□ 0.83
CMTM3-212ENST00000566121 BTBD11A6QL63 1104 aa20.23■□□□□ 0.83
CMTM3-212ENST00000566121 RTF1Q92541 710 aaKnown RBP20.23■□□□□ 0.83
CMTM3-212ENST00000566121 ATP10DQ9P241 1426 aa20.23■□□□□ 0.83
CMTM3-212ENST00000566121 NFIXQ14938 502 aa20.22■□□□□ 0.83
CMTM3-212ENST00000566121 PNNQ9H307 717 aaKnown RBP20.22■□□□□ 0.83
CMTM3-212ENST00000566121 PDZRN3Q9UPQ7 1066 aa20.22■□□□□ 0.83
CMTM3-212ENST00000566121 CNGB1Q14028 1251 aaPredicted RBP20.21■□□□□ 0.83
CMTM3-212ENST00000566121 BRCA1P38398 1863 aaKnown RBP20.21■□□□□ 0.83
CMTM3-212ENST00000566121 NRXN2Q9P2S2 1712 aa20.2■□□□□ 0.82
CMTM3-212ENST00000566121 RALBP1Q15311 655 aa20.2■□□□□ 0.82
CMTM3-212ENST00000566121 BCS1LQ9Y276 419 aa20.2■□□□□ 0.82
CMTM3-212ENST00000566121 CANXP27824 592 aaKnown RBP20.19■□□□□ 0.82
CMTM3-212ENST00000566121 TAF7Q15545 349 aaPredicted RBP20.19■□□□□ 0.82
CMTM3-212ENST00000566121 DALRD3Q5D0E6 543 aaKnown RBP20.19■□□□□ 0.82
CMTM3-212ENST00000566121 PLEKHF1Q96S99 279 aa20.19■□□□□ 0.82
CMTM3-212ENST00000566121 SERPINB2P05120 415 aa20.18■□□□□ 0.82
CMTM3-212ENST00000566121 SNRPA1P09661 255 aaKnown RBP20.18■□□□□ 0.82
CMTM3-212ENST00000566121 CLEC4GQ6UXB4 293 aa20.18■□□□□ 0.82
CMTM3-212ENST00000566121 GPBP1L1Q9HC44 474 aaPredicted RBP20.18■□□□□ 0.82
CMTM3-212ENST00000566121 CEP350Q5VT06 3117 aa20.18■□□□□ 0.82
CMTM3-212ENST00000566121 N4BP2Q86UW6 1770 aaPredicted RBP20.18■□□□□ 0.82
CMTM3-212ENST00000566121 NEFMP07197 916 aa20.17■□□□□ 0.82
CMTM3-212ENST00000566121 PNISRQ8TF01 805 aaKnown RBP20.17■□□□□ 0.82
CMTM3-212ENST00000566121 ARFGEF1Q9Y6D6 1849 aa20.17■□□□□ 0.82
CMTM3-212ENST00000566121 KCNQ3O43525 872 aa20.15■□□□□ 0.82
CMTM3-212ENST00000566121 MCM10Q7L590 875 aa20.15■□□□□ 0.82
CMTM3-212ENST00000566121 USP16Q9Y5T5 823 aa20.15■□□□□ 0.82
CMTM3-212ENST00000566121 CAMTA2O94983 1202 aa20.14■□□□□ 0.81
CMTM3-212ENST00000566121 A1BGP04217 495 aa20.14■□□□□ 0.81
CMTM3-212ENST00000566121 ARHGAP27Q6ZUM4 889 aa20.14■□□□□ 0.81
CMTM3-212ENST00000566121 NPM2Q86SE8 214 aaKnown RBP20.14■□□□□ 0.81
CMTM3-212ENST00000566121 BRIP1Q9BX63 1249 aa20.14■□□□□ 0.81
CMTM3-212ENST00000566121 CARMIL3Q8ND23 1372 aa20.12■□□□□ 0.81
CMTM3-212ENST00000566121 ZC3H4Q9UPT8 1303 aaKnown RBP20.12■□□□□ 0.81
CMTM3-212ENST00000566121 AFDNP55196 1824 aaKnown RBP20.12■□□□□ 0.81
CMTM3-212ENST00000566121 NFE2L2Q16236 605 aa20.12■□□□□ 0.81
CMTM3-212ENST00000566121 CHRNA5P30532 468 aa20.11■□□□□ 0.81
CMTM3-212ENST00000566121 TBC1D9BQ66K14 1250 aa20.11■□□□□ 0.81
CMTM3-212ENST00000566121 BABAM1Q9NWV8 329 aa20.11■□□□□ 0.81
CMTM3-212ENST00000566121 H0YIN7 160 aa20.1■□□□□ 0.81
CMTM3-212ENST00000566121 PDE6BP35913 854 aa20.1■□□□□ 0.81
CMTM3-212ENST00000566121 TTLL6Q8N841 843 aa20.1■□□□□ 0.81
CMTM3-212ENST00000566121 SETDB2Q96T68 719 aa20.1■□□□□ 0.81
CMTM3-212ENST00000566121 WWC3Q9ULE0 1092 aa20.1■□□□□ 0.81
CMTM3-212ENST00000566121 TBC1D2BQ9UPU7 963 aa20.1■□□□□ 0.81
CMTM3-212ENST00000566121 KIF3CO14782 793 aa20.09■□□□□ 0.81
CMTM3-212ENST00000566121 SCN7AQ01118 1682 aa20.08■□□□□ 0.81
CMTM3-212ENST00000566121 DCTN1Q14203 1278 aa20.08■□□□□ 0.81
CMTM3-212ENST00000566121 PRR5LQ6MZQ0 368 aa20.08■□□□□ 0.81
CMTM3-212ENST00000566121 DZIP3Q86Y13 1208 aaKnown RBP20.08■□□□□ 0.81
CMTM3-212ENST00000566121 ZNF652Q9Y2D9 606 aa20.08■□□□□ 0.81
CMTM3-212ENST00000566121 KLRG2A4D1S0 409 aaPredicted RBP20.07■□□□□ 0.8
CMTM3-212ENST00000566121 C9orf131Q5VYM1 1079 aa20.07■□□□□ 0.8
CMTM3-212ENST00000566121 SENP3-EIF4A1A0A087X0R7 540 aa20.06■□□□□ 0.8
CMTM3-212ENST00000566121 NBPF26B4DH59 902 aa20.06■□□□□ 0.8
CMTM3-212ENST00000566121 NBPF10Q6P3W6 841 aaKnown RBP20.06■□□□□ 0.8
CMTM3-212ENST00000566121 C2CD5Q86YS7 1000 aa20.06■□□□□ 0.8
CMTM3-212ENST00000566121 NBPF15Q8N660 670 aa20.06■□□□□ 0.8
CMTM3-212ENST00000566121 DLEC1Q9Y238 1755 aa20.06■□□□□ 0.8
CMTM3-212ENST00000566121 EIF4A1P60842 406 aaKnown RBP20.05■□□□□ 0.8
CMTM3-212ENST00000566121 ERBB4Q15303 1308 aa20.04■□□□□ 0.8
CMTM3-212ENST00000566121 MAPK8IP3Q9UPT6 1336 aa20.04■□□□□ 0.8
CMTM3-212ENST00000566121 PRAMEF22A3QJZ6 481 aa20.04■□□□□ 0.8
CMTM3-212ENST00000566121 ERVV-1B6SEH8 477 aa20.04■□□□□ 0.8
CMTM3-212ENST00000566121 TOMM70O94826 608 aa20.04■□□□□ 0.8
CMTM3-212ENST00000566121 MYBBP1AQ9BQG0 1328 aaKnown RBP20.03■□□□□ 0.8
CMTM3-212ENST00000566121 LMNB1P20700 586 aa20.03■□□□□ 0.8
CMTM3-212ENST00000566121 STYK1Q6J9G0 422 aa20.03■□□□□ 0.8
CMTM3-212ENST00000566121 BICDL1Q6ZP65 573 aa20.03■□□□□ 0.8
CMTM3-212ENST00000566121 CNBD1Q8NA66 436 aa20.03■□□□□ 0.8
CMTM3-212ENST00000566121 HSPA6P17066 643 aa20.02■□□□□ 0.8
CMTM3-212ENST00000566121 ST5P78524 1137 aa20.02■□□□□ 0.8
CMTM3-212ENST00000566121 LMOD3Q0VAK6 560 aa20.02■□□□□ 0.8
CMTM3-212ENST00000566121 CNKSR1Q969H4 720 aa20.02■□□□□ 0.8
CMTM3-212ENST00000566121 BCORQ6W2J9 1755 aa20.02■□□□□ 0.8
CMTM3-212ENST00000566121 SBF1O95248 1867 aa20.01■□□□□ 0.79
CMTM3-212ENST00000566121 SRGNP10124 158 aa20.01■□□□□ 0.79
CMTM3-212ENST00000566121 TPTE2Q6XPS3 522 aa20.01■□□□□ 0.79
CMTM3-212ENST00000566121 ZNF330Q9Y3S2 320 aaPredicted RBP20.01■□□□□ 0.79
CMTM3-212ENST00000566121 DLG5Q8TDM6 1919 aa20.01■□□□□ 0.79
CMTM3-212ENST00000566121 KDM2BQ8NHM5 1336 aa20.01■□□□□ 0.79
CMTM3-212ENST00000566121 LTBP3Q9NS15 1303 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms