RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 HOXB7P09629 217 aa21.57■■□□□ 1.04
RNF40-207ENST00000565931 EXOSC9Q06265 439 aaKnown RBP21.57■■□□□ 1.04
RNF40-207ENST00000565931 TSPYL6Q8N831 410 aa21.57■■□□□ 1.04
RNF40-207ENST00000565931 CICQ96RK0 1608 aaPredicted RBP21.56■■□□□ 1.04
RNF40-207ENST00000565931 ELL2O00472 640 aaPredicted RBP21.56■■□□□ 1.04
RNF40-207ENST00000565931 A1BGP04217 495 aa21.56■■□□□ 1.04
RNF40-207ENST00000565931 AK7Q96M32 723 aa21.56■■□□□ 1.04
RNF40-207ENST00000565931 CCDC87Q9NVE4 849 aa21.56■■□□□ 1.04
RNF40-207ENST00000565931 TJP1Q07157 1748 aa21.55■■□□□ 1.04
RNF40-207ENST00000565931 NUP188Q5SRE5 1749 aa21.55■■□□□ 1.04
RNF40-207ENST00000565931 ZBTB1Q9Y2K1 713 aa21.55■■□□□ 1.04
RNF40-207ENST00000565931 GNPATO15228 680 aa21.54■■□□□ 1.04
RNF40-207ENST00000565931 RPS6KA4O75676 772 aa21.54■■□□□ 1.04
RNF40-207ENST00000565931 EIF2S2P20042 333 aaKnown RBP21.54■■□□□ 1.04
RNF40-207ENST00000565931 AMIGO3Q86WK7 504 aa21.54■■□□□ 1.04
RNF40-207ENST00000565931 YTHDC1Q96MU7 727 aaKnown RBP21.54■■□□□ 1.04
RNF40-207ENST00000565931 SOS1Q07889 1333 aaPredicted RBP21.54■■□□□ 1.04
RNF40-207ENST00000565931 C5P01031 1676 aa21.53■■□□□ 1.04
RNF40-207ENST00000565931 TWISTNBQ3B726 338 aaPredicted RBP21.53■■□□□ 1.04
RNF40-207ENST00000565931 TFCP2L1Q9NZI6 479 aa21.53■■□□□ 1.04
RNF40-207ENST00000565931 C4BP0C0L5 1744 aa21.52■■□□□ 1.04
RNF40-207ENST00000565931 NBPF26B4DH59 902 aa21.52■■□□□ 1.04
RNF40-207ENST00000565931 CANXP27824 592 aaKnown RBP21.52■■□□□ 1.04
RNF40-207ENST00000565931 HDGFL1Q5TGJ6 251 aa21.52■■□□□ 1.04
RNF40-207ENST00000565931 NBPF10Q6P3W6 841 aaKnown RBP21.52■■□□□ 1.04
RNF40-207ENST00000565931 SMIM5Q71RC9 77 aa21.52■■□□□ 1.04
RNF40-207ENST00000565931 NBPF15Q8N660 670 aa21.52■■□□□ 1.04
RNF40-207ENST00000565931 RTCBQ9Y3I0 505 aaKnown RBP21.52■■□□□ 1.04
RNF40-207ENST00000565931 VAMP4O75379 141 aa21.51■■□□□ 1.03
RNF40-207ENST00000565931 R3HDM1Q15032 1099 aaKnown RBP21.51■■□□□ 1.03
RNF40-207ENST00000565931 NECTIN2Q92692 538 aa21.51■■□□□ 1.03
RNF40-207ENST00000565931 ERBB4Q15303 1308 aa21.51■■□□□ 1.03
RNF40-207ENST00000565931 PIP4K2AP48426 406 aaPredicted RBP21.5■■□□□ 1.03
RNF40-207ENST00000565931 EIF5P55010 431 aaKnown RBP21.5■■□□□ 1.03
RNF40-207ENST00000565931 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.49■■□□□ 1.03
RNF40-207ENST00000565931 SSFA2P28290 1259 aa21.49■■□□□ 1.03
RNF40-207ENST00000565931 IL6STP40189 918 aaPredicted RBP21.49■■□□□ 1.03
RNF40-207ENST00000565931 PDIA6Q15084 440 aa21.49■■□□□ 1.03
RNF40-207ENST00000565931 PNPLA7Q6ZV29 1317 aa21.49■■□□□ 1.03
RNF40-207ENST00000565931 COL5A3P25940 1745 aaPredicted RBP21.49■■□□□ 1.03
RNF40-207ENST00000565931 TAF1LQ8IZX4 1826 aa21.48■■□□□ 1.03
RNF40-207ENST00000565931 ADRA2BP18089 450 aa21.48■■□□□ 1.03
RNF40-207ENST00000565931 FLAD1Q8NFF5 587 aa21.48■■□□□ 1.03
RNF40-207ENST00000565931 CHMP4AQ9BY43 222 aa21.48■■□□□ 1.03
RNF40-207ENST00000565931 PSDA5PKW4 1024 aaPredicted RBP21.47■■□□□ 1.03
RNF40-207ENST00000565931 PHF14O94880 888 aa21.47■■□□□ 1.03
RNF40-207ENST00000565931 TRAPPC3LQ5T215 181 aa21.47■■□□□ 1.03
RNF40-207ENST00000565931 COL23A1Q86Y22 540 aaPredicted RBP21.47■■□□□ 1.03
RNF40-207ENST00000565931 DDX21Q9NR30 783 aaKnown RBP eCLIP21.47■■□□□ 1.03
RNF40-207ENST00000565931 PROSER3Q2NL68 480 aa21.46■■□□□ 1.03
RNF40-207ENST00000565931 CCDC30Q5VVM6 783 aa21.46■■□□□ 1.03
RNF40-207ENST00000565931 LRP10Q7Z4F1 713 aa21.46■■□□□ 1.03
RNF40-207ENST00000565931 ARHGEF1Q92888 912 aaKnown RBP21.46■■□□□ 1.03
RNF40-207ENST00000565931 CHPF2Q9P2E5 772 aa21.46■■□□□ 1.03
RNF40-207ENST00000565931 ANXA1P04083 346 aa21.45■■□□□ 1.02
RNF40-207ENST00000565931 MYL6BP14649 208 aa21.45■■□□□ 1.02
RNF40-207ENST00000565931 PDGFDQ9GZP0 370 aaPredicted RBP21.45■■□□□ 1.02
RNF40-207ENST00000565931 DBF4Q9UBU7 674 aaPredicted RBP21.45■■□□□ 1.02
RNF40-207ENST00000565931 ZNF330Q9Y3S2 320 aaPredicted RBP21.44■■□□□ 1.02
RNF40-207ENST00000565931 A0A087WZG4 1122 aa21.43■■□□□ 1.02
RNF40-207ENST00000565931 TCERG1O14776 1098 aaKnown RBP21.43■■□□□ 1.02
RNF40-207ENST00000565931 CT47B1P0C2W7 299 aaPredicted RBP21.43■■□□□ 1.02
RNF40-207ENST00000565931 COL15A1P39059 1388 aa21.43■■□□□ 1.02
RNF40-207ENST00000565931 MYH14Q7Z406 1995 aaKnown RBP21.43■■□□□ 1.02
RNF40-207ENST00000565931 LAMB4A4D0S4 1761 aa21.42■■□□□ 1.02
RNF40-207ENST00000565931 RFC4P35249 363 aa21.42■■□□□ 1.02
RNF40-207ENST00000565931 NPM2Q86SE8 214 aaKnown RBP21.42■■□□□ 1.02
RNF40-207ENST00000565931 MSH5O43196 834 aa21.41■■□□□ 1.02
RNF40-207ENST00000565931 STK31Q9BXU1 1019 aa21.41■■□□□ 1.02
RNF40-207ENST00000565931 HYPKQ9NX55 129 aa21.41■■□□□ 1.02
RNF40-207ENST00000565931 DZIP3Q86Y13 1208 aaKnown RBP21.4■■□□□ 1.02
RNF40-207ENST00000565931 ZNF428Q96B54 188 aa21.4■■□□□ 1.02
RNF40-207ENST00000565931 NARFQ9UHQ1 456 aa21.4■■□□□ 1.02
RNF40-207ENST00000565931 TBC1D2BQ9UPU7 963 aa21.4■■□□□ 1.02
RNF40-207ENST00000565931 USP42Q9H9J4 1324 aaKnown RBP21.39■■□□□ 1.01
RNF40-207ENST00000565931 SLC4A2P04920 1241 aa21.39■■□□□ 1.01
RNF40-207ENST00000565931 TTLL7Q6ZT98 887 aa21.39■■□□□ 1.01
RNF40-207ENST00000565931 COPS6Q7L5N1 327 aa21.39■■□□□ 1.01
RNF40-207ENST00000565931 SLC16A10Q8TF71 515 aa21.39■■□□□ 1.01
RNF40-207ENST00000565931 XAGE3Q8WTP9 111 aa21.39■■□□□ 1.01
RNF40-207ENST00000565931 SRP68Q9UHB9 627 aaKnown RBP21.39■■□□□ 1.01
RNF40-207ENST00000565931 ARXQ96QS3 562 aa21.38■■□□□ 1.01
RNF40-207ENST00000565931 PHAXQ9H814 394 aaKnown RBP21.38■■□□□ 1.01
RNF40-207ENST00000565931 UBR3Q6ZT12 1888 aa21.38■■□□□ 1.01
RNF40-207ENST00000565931 ZPR1O75312 459 aa21.37■■□□□ 1.01
RNF40-207ENST00000565931 CAMTA2O94983 1202 aa21.37■■□□□ 1.01
RNF40-207ENST00000565931 USPL1Q5W0Q7 1092 aa21.37■■□□□ 1.01
RNF40-207ENST00000565931 SSH1Q8WYL5 1049 aa21.37■■□□□ 1.01
RNF40-207ENST00000565931 GYS1P13807 737 aa21.36■■□□□ 1.01
RNF40-207ENST00000565931 AIMP1Q12904 312 aaKnown RBP21.36■■□□□ 1.01
RNF40-207ENST00000565931 ALDH1L2Q3SY69 923 aa21.36■■□□□ 1.01
RNF40-207ENST00000565931 G2E3Q7L622 706 aa21.36■■□□□ 1.01
RNF40-207ENST00000565931 BCL2L12Q9HB09 334 aa21.36■■□□□ 1.01
RNF40-207ENST00000565931 MRPL50Q8N5N7 158 aaKnown RBP21.35■■□□□ 1.01
RNF40-207ENST00000565931 MAP3K15Q6ZN16 1313 aa21.34■■□□□ 1.01
RNF40-207ENST00000565931 ERVV-1B6SEH8 477 aa21.34■■□□□ 1.01
RNF40-207ENST00000565931 ZBTB7AO95365 584 aa21.34■■□□□ 1.01
RNF40-207ENST00000565931 RARSP54136 660 aaKnown RBP21.34■■□□□ 1.01
RNF40-207ENST00000565931 KIF6Q6ZMV9 814 aa21.34■■□□□ 1.01
RNF40-207ENST00000565931 QSER1Q2KHR3 1735 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms